GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002193-TA|BGIBMGA002193-PA|undefined
         (52 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           21   3.2  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            21   4.2  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            21   4.2  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    20   9.8  

>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 8/24 (33%), Positives = 12/24 (50%)

Query: 23  LWLDSTDTQLSVRKDGHFKTSLDW 46
           +WL+ +D +L      H  T L W
Sbjct: 585 VWLNISDNKLEHFDYSHIPTHLQW 608


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 6/14 (42%), Positives = 10/14 (71%)

Query: 15  PEWLQVKDLWLDST 28
           P+WLQ   +WL+ +
Sbjct: 679 PKWLQTLVIWLNQS 692


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 9/24 (37%), Positives = 11/24 (45%)

Query: 23  LWLDSTDTQLSVRKDGHFKTSLDW 46
           LWL+ +D  L V       T L W
Sbjct: 550 LWLNISDNHLEVFDYALIPTGLQW 573


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 10/18 (55%), Positives = 11/18 (61%)

Query: 26  DSTDTQLSVRKDGHFKTS 43
           DST T+  V  DG  KTS
Sbjct: 739 DSTTTKCRVVFDGSCKTS 756


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.325    0.137    0.453 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,604
Number of Sequences: 2123
Number of extensions: 1105
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 52
length of database: 516,269
effective HSP length: 32
effective length of query: 20
effective length of database: 448,333
effective search space:  8966660
effective search space used:  8966660
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (21.2 bits)
S2: 39 (19.8 bits)