GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002191-TA|BGIBMGA002191-PA|undefined
         (58 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    20   2.2  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    20   2.2  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    20   2.2  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    19   3.9  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    19   3.9  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    18   9.0  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    18   9.0  

>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 19.8 bits (39), Expect = 2.2
 Identities = 5/11 (45%), Positives = 7/11 (63%)

Query: 17  VLEWNPACSFY 27
           V+ W   C+FY
Sbjct: 238 VISWQAVCTFY 248


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 19.8 bits (39), Expect = 2.2
 Identities = 5/11 (45%), Positives = 7/11 (63%)

Query: 17  VLEWNPACSFY 27
           V+ W   C+FY
Sbjct: 238 VISWQAVCTFY 248


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 19.8 bits (39), Expect = 2.2
 Identities = 5/11 (45%), Positives = 7/11 (63%)

Query: 17  VLEWNPACSFY 27
           V+ W   C+FY
Sbjct: 558 VISWQAVCTFY 568


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 19.0 bits (37), Expect = 3.9
 Identities = 7/11 (63%), Positives = 8/11 (72%)

Query: 17  VLEWNPACSFY 27
           VL +N  CSFY
Sbjct: 281 VLGFNEICSFY 291


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 19.0 bits (37), Expect = 3.9
 Identities = 10/27 (37%), Positives = 13/27 (48%), Gaps = 2/27 (7%)

Query: 28  ESKGAVNLTNKEQWCYYRLTGDALRDF 54
           +SK    L N     YYR+ GD +  F
Sbjct: 213 QSKSVEELMNIAN--YYRILGDTVEIF 237


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
          protein.
          Length = 314

 Score = 17.8 bits (34), Expect = 9.0
 Identities = 6/12 (50%), Positives = 7/12 (58%)

Query: 23 ACSFYESKGAVN 34
          AC  Y S+G  N
Sbjct: 75 ACKLYSSEGQQN 86


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 17.8 bits (34), Expect = 9.0
 Identities = 6/11 (54%), Positives = 8/11 (72%)

Query: 48  GDALRDFAKDG 58
           GD + DF+K G
Sbjct: 202 GDGILDFSKRG 212


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.323    0.136    0.467 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,739
Number of Sequences: 317
Number of extensions: 458
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of query: 58
length of database: 114,650
effective HSP length: 38
effective length of query: 20
effective length of database: 102,604
effective search space:  2052080
effective search space used:  2052080
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.7 bits)
S2: 34 (17.8 bits)