GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002191-TA|BGIBMGA002191-PA|undefined
         (58 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z14136-1|CAA78509.1|  171|Homo sapiens spermidine/spermine N1-ac...    39   0.003
U40369-1|AAA98854.1|  171|Homo sapiens spermidine/spermine N1-ac...    39   0.003
M77693-1|AAA60573.1|  171|Homo sapiens spermidine/spermine N1-ac...    39   0.003
M55580-1|AAA63260.1|  171|Homo sapiens spermidine/spermine N1-ac...    39   0.003
CR450294-1|CAG29290.1|  171|Homo sapiens SAT protein.                  39   0.003
BT006825-1|AAP35471.1|  171|Homo sapiens spermidine/spermine N1-...    39   0.003
BC008424-1|AAH08424.1|  171|Homo sapiens spermidine/spermine N1-...    39   0.003
BC002503-1|AAH02503.1|  171|Homo sapiens spermidine/spermine N1-...    39   0.003
BC095466-1|AAH95466.1|  235|Homo sapiens SAT2 protein protein.         38   0.004
BC011751-1|AAH11751.1|  170|Homo sapiens spermidine/spermine N1-...    38   0.004
AF348524-1|AAL83905.1|  170|Homo sapiens polyamine N-acetyltrans...    38   0.004
AF251292-1|AAG44592.1|  192|Homo sapiens DC21 protein.                 31   0.57 
BC113702-1|AAI13703.1| 1322|Homo sapiens FERM and PDZ domain con...    27   7.0  
BC113700-1|AAI13701.1| 1322|Homo sapiens FERM and PDZ domain con...    27   7.0  
AB002314-1|BAA20774.3| 1379|Homo sapiens KIAA0316 protein protein.     27   7.0  

>Z14136-1|CAA78509.1|  171|Homo sapiens spermidine/spermine
           N1-acetyltransferase protein.
          Length = 171

 Score = 38.7 bits (86), Expect = 0.003
 Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)

Query: 3   QEASATGCCRLDFHVLEWN-PACSFYESKGAVNLTNKEQWCYYRLTGDALRDFAKD 57
           Q A    C  + F V EWN P+ +FY+ +GA +L+++E W  +++  + L   A +
Sbjct: 115 QVAMRCRCSSMHFLVAEWNEPSINFYKRRGASDLSSEEGWRLFKIDKEYLLKMATE 170


>U40369-1|AAA98854.1|  171|Homo sapiens spermidine/spermine
           N1-acetyltransferase protein.
          Length = 171

 Score = 38.7 bits (86), Expect = 0.003
 Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)

Query: 3   QEASATGCCRLDFHVLEWN-PACSFYESKGAVNLTNKEQWCYYRLTGDALRDFAKD 57
           Q A    C  + F V EWN P+ +FY+ +GA +L+++E W  +++  + L   A +
Sbjct: 115 QVAMRCRCSSMHFLVAEWNEPSINFYKRRGASDLSSEEGWRLFKIDKEYLLKMATE 170


>M77693-1|AAA60573.1|  171|Homo sapiens spermidine/spermine
           N1-acetyltransferase protein.
          Length = 171

 Score = 38.7 bits (86), Expect = 0.003
 Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)

Query: 3   QEASATGCCRLDFHVLEWN-PACSFYESKGAVNLTNKEQWCYYRLTGDALRDFAKD 57
           Q A    C  + F V EWN P+ +FY+ +GA +L+++E W  +++  + L   A +
Sbjct: 115 QVAMRCRCSSMHFLVAEWNEPSINFYKRRGASDLSSEEGWRLFKIDKEYLLKMATE 170


>M55580-1|AAA63260.1|  171|Homo sapiens spermidine/spermine
           N1-acetyltransferase protein.
          Length = 171

 Score = 38.7 bits (86), Expect = 0.003
 Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)

Query: 3   QEASATGCCRLDFHVLEWN-PACSFYESKGAVNLTNKEQWCYYRLTGDALRDFAKD 57
           Q A    C  + F V EWN P+ +FY+ +GA +L+++E W  +++  + L   A +
Sbjct: 115 QVAMRCRCSSMHFLVAEWNEPSINFYKRRGASDLSSEEGWRLFKIDKEYLLKMATE 170


>CR450294-1|CAG29290.1|  171|Homo sapiens SAT protein.
          Length = 171

 Score = 38.7 bits (86), Expect = 0.003
 Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)

Query: 3   QEASATGCCRLDFHVLEWN-PACSFYESKGAVNLTNKEQWCYYRLTGDALRDFAKD 57
           Q A    C  + F V EWN P+ +FY+ +GA +L+++E W  +++  + L   A +
Sbjct: 115 QVAMRCRCSSMHFLVAEWNEPSINFYKRRGASDLSSEEGWRLFKIDKEYLLKMATE 170


>BT006825-1|AAP35471.1|  171|Homo sapiens spermidine/spermine
           N1-acetyltransferase protein.
          Length = 171

 Score = 38.7 bits (86), Expect = 0.003
 Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)

Query: 3   QEASATGCCRLDFHVLEWN-PACSFYESKGAVNLTNKEQWCYYRLTGDALRDFAKD 57
           Q A    C  + F V EWN P+ +FY+ +GA +L+++E W  +++  + L   A +
Sbjct: 115 QVAMRCRCSSMHFLVAEWNEPSINFYKRRGASDLSSEEGWRLFKIDKEYLLKMATE 170


>BC008424-1|AAH08424.1|  171|Homo sapiens spermidine/spermine
           N1-acetyltransferase 1 protein.
          Length = 171

 Score = 38.7 bits (86), Expect = 0.003
 Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)

Query: 3   QEASATGCCRLDFHVLEWN-PACSFYESKGAVNLTNKEQWCYYRLTGDALRDFAKD 57
           Q A    C  + F V EWN P+ +FY+ +GA +L+++E W  +++  + L   A +
Sbjct: 115 QVAMRCRCSSMHFLVAEWNEPSINFYKRRGASDLSSEEGWRLFKIDKEYLLKMATE 170


>BC002503-1|AAH02503.1|  171|Homo sapiens spermidine/spermine
           N1-acetyltransferase 1 protein.
          Length = 171

 Score = 38.7 bits (86), Expect = 0.003
 Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)

Query: 3   QEASATGCCRLDFHVLEWN-PACSFYESKGAVNLTNKEQWCYYRLTGDALRDFAKD 57
           Q A    C  + F V EWN P+ +FY+ +GA +L+++E W  +++  + L   A +
Sbjct: 115 QVAMRCRCSSMHFLVAEWNEPSINFYKRRGASDLSSEEGWRLFKIDKEYLLKMATE 170


>BC095466-1|AAH95466.1|  235|Homo sapiens SAT2 protein protein.
          Length = 235

 Score = 38.3 bits (85), Expect = 0.004
 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 9   GCCRLDFHVLEWNP-ACSFYESKGAVNLTNKEQWCYYRLTGDALRDFA 55
           GC +    VL+WN  A   Y++ GA +LT  E W ++   G+A R  A
Sbjct: 186 GCSQFRLAVLDWNQRAMDLYKALGAQDLTEAEGWHFFCFQGEATRKLA 233


>BC011751-1|AAH11751.1|  170|Homo sapiens spermidine/spermine
           N1-acetyltransferase 2 protein.
          Length = 170

 Score = 38.3 bits (85), Expect = 0.004
 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 9   GCCRLDFHVLEWNP-ACSFYESKGAVNLTNKEQWCYYRLTGDALRDFA 55
           GC +    VL+WN  A   Y++ GA +LT  E W ++   G+A R  A
Sbjct: 121 GCSQFRLAVLDWNQRAMDLYKALGAQDLTEAEGWHFFCFQGEATRKLA 168


>AF348524-1|AAL83905.1|  170|Homo sapiens polyamine
           N-acetyltransferase protein.
          Length = 170

 Score = 38.3 bits (85), Expect = 0.004
 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 9   GCCRLDFHVLEWNP-ACSFYESKGAVNLTNKEQWCYYRLTGDALRDFA 55
           GC +    VL+WN  A   Y++ GA +LT  E W ++   G+A R  A
Sbjct: 121 GCSQFRLAVLDWNQRAMDLYKALGAQDLTEAEGWHFFCFQGEATRKLA 168


>AF251292-1|AAG44592.1|  192|Homo sapiens DC21 protein.
          Length = 192

 Score = 31.1 bits (67), Expect = 0.57
 Identities = 12/26 (46%), Positives = 20/26 (76%), Gaps = 1/26 (3%)

Query: 17  VLEWN-PACSFYESKGAVNLTNKEQW 41
           V EWN P+ +FY+ +GA +L+++E W
Sbjct: 158 VAEWNEPSINFYKRRGASDLSSEEGW 183


>BC113702-1|AAI13703.1| 1322|Homo sapiens FERM and PDZ domain
           containing 4 protein.
          Length = 1322

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 3/52 (5%)

Query: 1   MFQEASATGCCRLDFHVLEWNPACSFYESKGAVNLTNKEQWCYYRLTGDALR 52
           MF E  +    R++ HVL+  P     ES  A+NL       YYRL  D+ R
Sbjct: 472 MFSEEESL--VRVELHVLDVKPITLLMESSDAMNLACLTAG-YYRLLVDSRR 520


>BC113700-1|AAI13701.1| 1322|Homo sapiens FERM and PDZ domain
           containing 4 protein.
          Length = 1322

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 3/52 (5%)

Query: 1   MFQEASATGCCRLDFHVLEWNPACSFYESKGAVNLTNKEQWCYYRLTGDALR 52
           MF E  +    R++ HVL+  P     ES  A+NL       YYRL  D+ R
Sbjct: 472 MFSEEESL--VRVELHVLDVKPITLLMESSDAMNLACLTAG-YYRLLVDSRR 520


>AB002314-1|BAA20774.3| 1379|Homo sapiens KIAA0316 protein protein.
          Length = 1379

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 3/52 (5%)

Query: 1   MFQEASATGCCRLDFHVLEWNPACSFYESKGAVNLTNKEQWCYYRLTGDALR 52
           MF E  +    R++ HVL+  P     ES  A+NL       YYRL  D+ R
Sbjct: 529 MFSEEESL--VRVELHVLDVKPITLLMESSDAMNLACLTAG-YYRLLVDSRR 577


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.323    0.136    0.467 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,659,585
Number of Sequences: 224733
Number of extensions: 243928
Number of successful extensions: 569
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 558
Number of HSP's gapped (non-prelim): 15
length of query: 58
length of database: 73,234,838
effective HSP length: 38
effective length of query: 20
effective length of database: 64,694,984
effective search space: 1293899680
effective search space used: 1293899680
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 57 (27.1 bits)