GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002191-TA|BGIBMGA002191-PA|undefined
         (58 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    21   1.5  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    21   1.5  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    19   6.3  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    19   6.3  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               18   8.3  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    18   8.3  

>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 20.6 bits (41), Expect = 1.5
 Identities = 8/22 (36%), Positives = 12/22 (54%)

Query: 30  KGAVNLTNKEQWCYYRLTGDAL 51
           KG + +   E++ Y RL G  L
Sbjct: 280 KGVMRVDASEEYSYLRLKGQML 301


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 20.6 bits (41), Expect = 1.5
 Identities = 8/22 (36%), Positives = 12/22 (54%)

Query: 30  KGAVNLTNKEQWCYYRLTGDAL 51
           KG + +   E++ Y RL G  L
Sbjct: 280 KGVMRVDASEEYSYLRLKGQML 301


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 18.6 bits (36), Expect = 6.3
 Identities = 6/15 (40%), Positives = 9/15 (60%)

Query: 9   GCCRLDFHVLEWNPA 23
           GC +L  + + WN A
Sbjct: 500 GCYQLAINHIRWNSA 514


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 18.6 bits (36), Expect = 6.3
 Identities = 6/15 (40%), Positives = 9/15 (60%)

Query: 9   GCCRLDFHVLEWNPA 23
           GC +L  + + WN A
Sbjct: 590 GCYQLAINHIRWNSA 604


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 18.2 bits (35), Expect = 8.3
 Identities = 6/11 (54%), Positives = 7/11 (63%)

Query: 12  RLDFHVLEWNP 22
           +L   V EWNP
Sbjct: 522 KLTLEVEEWNP 532


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 18.2 bits (35), Expect = 8.3
 Identities = 7/21 (33%), Positives = 10/21 (47%)

Query: 21  NPACSFYESKGAVNLTNKEQW 41
           NPA      KG ++   K +W
Sbjct: 605 NPAERLGYQKGGISEIQKHKW 625


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.323    0.136    0.467 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,874
Number of Sequences: 429
Number of extensions: 426
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of query: 58
length of database: 140,377
effective HSP length: 38
effective length of query: 20
effective length of database: 124,075
effective search space:  2481500
effective search space used:  2481500
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (19.2 bits)
S2: 35 (18.2 bits)