Silkworm BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002190-TA|BGIBMGA002190-PA|IPR000182|GCN5-related
N-acetyltransferase
         (112 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   1.1  
AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.        22   6.0  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    22   6.0  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    21   8.0  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/39 (28%), Positives = 16/39 (41%)

Query: 28  LVHDGFEKQPPEFFCKVAEKHKENILGYAIYFPVYSTWE 66
           L  D F K  P + C    +    +  Y I  P+ S W+
Sbjct: 794 LPSDTFTKLTPIWRCATTVRKGRKLYQYTIRLPINSPWK 832


>AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.
          Length = 441

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/29 (31%), Positives = 12/29 (41%)

Query: 26 KDLVHDGFEKQPPEFFCKVAEKHKENILG 54
          K  VH    K  P+F   +  K  E + G
Sbjct: 65 KQHVHPSLRKSAPQFLLNIYHKFTEEMNG 93


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 6/18 (33%), Positives = 13/18 (72%)

Query: 60  PVYSTWEGRALMLEDLYV 77
           P  STW  ++++ E+L++
Sbjct: 98  PTTSTWTSKSVLCEELFL 115


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 12/51 (23%), Positives = 21/51 (41%)

Query: 38  PEFFCKVAEKHKENILGYAIYFPVYSTWEGRALMLEDLYVRMNERRRGVGR 88
           P   C V  + K +I    +    + +W     M+ D  +R+    RG+ R
Sbjct: 726 PVNICGVEVRSKRSIRYLGVMLHDHLSWRPHVEMVADKALRVVRALRGIMR 776


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.324    0.141    0.423 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,356
Number of Sequences: 2123
Number of extensions: 4385
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 112
length of database: 516,269
effective HSP length: 56
effective length of query: 56
effective length of database: 397,381
effective search space: 22253336
effective search space used: 22253336
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 43 (21.4 bits)