GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002190-TA|BGIBMGA002190-PA|IPR000182|GCN5-related
N-acetyltransferase
         (112 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   1.7  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          20   5.2  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         19   9.0  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    19   9.0  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 1.7
 Identities = 7/19 (36%), Positives = 13/19 (68%)

Query: 5   MRLLQELADYEKMSDGPKL 23
           +R  ++L +YE   +GPK+
Sbjct: 621 LRQYEDLLEYEAKEEGPKV 639


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 20.2 bits (40), Expect = 5.2
 Identities = 7/10 (70%), Positives = 8/10 (80%)

Query: 61  VYSTWEGRAL 70
           VYS WEG+ L
Sbjct: 272 VYSGWEGQVL 281


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 8/23 (34%), Positives = 12/23 (52%)

Query: 29 VHDGFEKQPPEFFCKVAEKHKEN 51
          + D  +K PP   CK+ +  K N
Sbjct: 37 IKDLLQKYPPIANCKLVQAPKLN 59


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 7/18 (38%), Positives = 9/18 (50%)

Query: 48  HKENILGYAIYFPVYSTW 65
           H +    Y+   P YSTW
Sbjct: 290 HIQQATPYSAPGPTYSTW 307


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.324    0.141    0.423 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,139
Number of Sequences: 317
Number of extensions: 1076
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 112
length of database: 114,650
effective HSP length: 49
effective length of query: 63
effective length of database: 99,117
effective search space:  6244371
effective search space used:  6244371
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.6 bits)
S2: 38 (19.4 bits)