GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002190-TA|BGIBMGA002190-PA|IPR000182|GCN5-related
N-acetyltransferase
         (112 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter...    22   2.0  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        20   8.0  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        20   8.0  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        20   8.0  

>AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter
           transporter-1A protein.
          Length = 203

 Score = 21.8 bits (44), Expect = 2.0
 Identities = 11/34 (32%), Positives = 16/34 (47%)

Query: 41  FCKVAEKHKENILGYAIYFPVYSTWEGRALMLED 74
           F KV   +  N+    +  PV   WE RAL + +
Sbjct: 131 FIKVCSVNDVNMTITELTDPVKEFWERRALQISE 164


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 8/25 (32%), Positives = 15/25 (60%)

Query: 10  ELADYEKMSDGPKLSIKDLVHDGFE 34
           E+ DY  +  G + +++ L H+G E
Sbjct: 226 EVCDYPDIYSGYEGALRCLAHNGGE 250


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 8/25 (32%), Positives = 15/25 (60%)

Query: 10  ELADYEKMSDGPKLSIKDLVHDGFE 34
           E+ DY  +  G + +++ L H+G E
Sbjct: 226 EVCDYPDIYSGYEGALRCLAHNGGE 250


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 8/25 (32%), Positives = 15/25 (60%)

Query: 10  ELADYEKMSDGPKLSIKDLVHDGFE 34
           E+ DY  +  G + +++ L H+G E
Sbjct: 226 EVCDYPDIYSGYEGALRCLAHNGGE 250


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.324    0.141    0.423 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,637
Number of Sequences: 429
Number of extensions: 1273
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 112
length of database: 140,377
effective HSP length: 50
effective length of query: 62
effective length of database: 118,927
effective search space:  7373474
effective search space used:  7373474
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (21.0 bits)
S2: 39 (19.8 bits)