Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002189-TA|BGIBMGA002189-PA|IPR007087|Zinc finger,
C2H2-type
(491 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 76 1e-14
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 59 2e-09
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 55 3e-08
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 51 3e-07
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 47 7e-06
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 47 7e-06
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 45 2e-05
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 44 6e-05
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 42 2e-04
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 38 0.003
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 34 0.052
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 32 0.21
SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces... 31 0.36
SPAC6B12.08 |mug185||DNAJ domain protein Jjj family|Schizosaccha... 28 3.4
SPAC22E12.11c |set3||histone lysine methyltransferase Set3|Schiz... 27 4.5
SPAC10F6.17c ||SPAC56E4.01c|mitochondrial pyruvate dehydrogenase... 27 5.9
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 27 7.8
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 76.2 bits (179), Expect = 1e-14
Identities = 39/111 (35%), Positives = 56/111 (50%), Gaps = 6/111 (5%)
Query: 203 EECNKLFPSKNALQRHNNIHTGKLNYQCDL--CGKSFIHTSSFKMHKLSHSGVKPHSC-- 258
EEC K + + L++H H+ + + CD C K+F S K+HK H+ VKP SC
Sbjct: 28 EECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKPFSCHY 87
Query: 259 DVCGLALMTRSHLKRHKRVHSGEKRHECAL--CGKRFSERYNLMAHAKSHH 307
D C T+ HL+RH VH K + C C + FS+ L +H + H
Sbjct: 88 DGCDAQFYTQQHLERHIEVHRKPKPYACTWEGCDECFSKHQQLRSHISACH 138
Score = 56.8 bits (131), Expect = 6e-09
Identities = 50/178 (28%), Positives = 76/178 (42%), Gaps = 19/178 (10%)
Query: 145 DQCTNRYTSLVRLERHKQIKHEGSKPPYIC--EICGAHYKHKRACDIHI-ALHKGISDWK 201
D C ++ + LERH ++ H KP Y C E C + + HI A H + +
Sbjct: 88 DGCDAQFYTQQHLERHIEV-HRKPKP-YACTWEGCDECFSKHQQLRSHISACHTHLLPYP 145
Query: 202 C--EECNKLFPSKNALQRH-NNIHTGKLNYQCDLCGKSFIHTSSF-KMHKLSHSGVKPH- 256
C ++C F +K LQ H N H ++Y C +S + F K +L + + H
Sbjct: 146 CTYQDCELRFATKQKLQNHVNRAHEKIISYSCP--HESCVGHEGFEKWSQLQNHIREAHV 203
Query: 257 -SCDVCGLALMTRSHLKRHKRVH----SGEKRHECAL--CGKRFSERYNLMAHAKSHH 307
SC +CG T +HL+ H +H K + C + C K F+ L H H
Sbjct: 204 PSCSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIH 261
Score = 43.2 bits (97), Expect = 8e-05
Identities = 40/172 (23%), Positives = 66/172 (38%), Gaps = 11/172 (6%)
Query: 144 CDQCTNRYTSLVRLERHKQIKHEGS---KPPYIC--EICGAHYKHKRACDIHIA-LHKGI 197
C C ++ + L RH + H+ + + Y C E C + A HI+ +H+G
Sbjct: 206 CSICGRQFKTAAHL-RHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGN 264
Query: 198 SDWKCEECNKLFPSKNALQRHNNIHTGKLNYQ--CDLCGKSFIHTSSFKMHKLSHSGVKP 255
+ C+ C F K+ LQRH T K ++ + CG +H +
Sbjct: 265 MAFHCDSCGTKFGYKHMLQRHLERGTCKKAHKPYINECGIKHDGIEGVAIHDQKEKELSS 324
Query: 256 HSCDVCGLALMTRSHLKRHKRVHSGEKRHECALCGKRFSERYNLMAHAKSHH 307
+ V +A + + H + E C RF Y++ H SHH
Sbjct: 325 NL--VSDVAKKIINEVTGHGYKEAREYSCSFPECNYRFKRLYDMHRHLNSHH 374
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 58.8 bits (136), Expect = 2e-09
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Query: 227 NYQCDL--CGKSFIHTSSFKMHKLSHSGVKPHSCDVCGLALMTRSHLKRHKRVHSGEKRH 284
NY C C K F + K H +H+ +P C +C + + +RH+++H+G K
Sbjct: 569 NYVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAF 628
Query: 285 ECALCGKRFSERYNLMAHAKSHHG 308
C C +RF+ L H KS G
Sbjct: 629 ACVTCNQRFARMDALNRHYKSEVG 652
Score = 56.4 bits (130), Expect = 8e-09
Identities = 25/77 (32%), Positives = 35/77 (45%)
Query: 205 CNKLFPSKNALQRHNNIHTGKLNYQCDLCGKSFIHTSSFKMHKLSHSGVKPHSCDVCGLA 264
CNK F L+ H N HT +QC +C KSF + H+ H+G+K +C C
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQR 636
Query: 265 LMTRSHLKRHKRVHSGE 281
L RH + G+
Sbjct: 637 FARMDALNRHYKSEVGQ 653
Score = 49.6 bits (113), Expect = 1e-06
Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Query: 168 SKPPYICEICGAHYKHKRACDI--HIALHKGISDWKCEECNKLFPSKNALQRHNNIHTGK 225
S+ Y+C G + + RA ++ H+ H ++C C K F ++ +RH +HTG
Sbjct: 566 SQGNYVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGI 625
Query: 226 LNYQCDLCGKSFIHTSSFKMHKLSHSG 252
+ C C + F + H S G
Sbjct: 626 KAFACVTCNQRFARMDALNRHYKSEVG 652
Score = 45.6 bits (103), Expect = 2e-05
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Query: 147 CTNRYTSLVRLERHKQIKHEGSKPPYICEICGAHYKHKRACDIHIALHKGISDWKCEECN 206
C R+T L+ H H +P + C IC + + H LH GI + C CN
Sbjct: 577 CNKRFTRAYNLKSHMNT-HTNYRP-FQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCN 634
Query: 207 KLFPSKNALQRHNNIHTGK 225
+ F +AL RH G+
Sbjct: 635 QRFARMDALNRHYKSEVGQ 653
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 54.8 bits (126), Expect = 3e-08
Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 226 LNYQCDLCGKSFIHTSSFKMHKLSHSGVKPHSCDV--CGLALMTRSHLKRHKRVH 278
+ Y+C C + F SS K+H SH+G +P CD CG A RS+++RH+R+H
Sbjct: 466 VRYRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
Score = 39.5 bits (88), Expect = 0.001
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 200 WKCEECNKLFPSKNALQRHNNIHTGKLNYQCDL--CGKSFIHTSSFKMHKLSH 250
++C EC + F ++L+ H HTG+ + CD CGK+F S+ + H+ H
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 51.2 bits (117), Expect = 3e-07
Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 254 KPHSCDVCGLALMTRSHLKRHKRVHSGEKRHECAL--CGKRFSERYNLMAHAKSH 306
+P+ C +C A H RH R H+GEK H C C KRFS L HA+ H
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIH 78
Score = 43.6 bits (98), Expect = 6e-05
Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 228 YQCDLCGKSFIHTSSFKMHKLSHSGVKPHSCDVCGLA-LMTRS-HLKRHKRVH--SGEKR 283
Y+C LC K+F H +H+G KPH C G A +RS L RH R+H + +R
Sbjct: 26 YKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHTNANSRR 85
Query: 284 HECALCGKRFSER 296
+ A S R
Sbjct: 86 NAAAAAAANNSAR 98
Score = 32.7 bits (71), Expect = 0.12
Identities = 19/65 (29%), Positives = 25/65 (38%), Gaps = 2/65 (3%)
Query: 161 KQIKHEGSKPPYICEICGAHYKHKRACDIHIALHKGISDWKC--EECNKLFPSKNALQRH 218
+ K+ + PY C +C + HI H G C C K F + L RH
Sbjct: 15 RSTKNPDAPRPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRH 74
Query: 219 NNIHT 223
IHT
Sbjct: 75 ARIHT 79
Score = 31.5 bits (68), Expect = 0.27
Identities = 16/54 (29%), Positives = 21/54 (38%), Gaps = 2/54 (3%)
Query: 200 WKCEECNKLFPSKNALQRHNNIHTGKLNYQCDL--CGKSFIHTSSFKMHKLSHS 251
+KC C K F RH HTG+ + C C K F + H H+
Sbjct: 26 YKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHT 79
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 46.8 bits (106), Expect = 7e-06
Identities = 24/56 (42%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 252 GVKPHSCDVCGLALMTRSHLKRHKR-VHSGEKRHECALCGKRFSERYNLMAHAKSH 306
G K C C HL+RH R +H+ EK C +CGKRFS R NL H + H
Sbjct: 419 GGKSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLH 473
Score = 41.5 bits (93), Expect = 3e-04
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 196 GISDWKCEECNKLFPSKNALQRH-NNIHTGKLNYQCDLCGKSFIHTSSFKMHKLSHSGVK 254
G + C EC+K F L+RH ++HT + + C +CGK F + + H+ H
Sbjct: 419 GGKSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLHVNAS 477
Query: 255 P 255
P
Sbjct: 478 P 478
Score = 33.1 bits (72), Expect = 0.090
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 144 CDQCTNRYTSLVRLERHKQIKHEGSKPPYICEICGAHYKHKRACDIHIALHKGIS 198
C +C+ ++ L RH + H K P++C ICG + + H LH S
Sbjct: 425 CPECSKKFKRSEHLRRHIRSLHTSEK-PFVC-ICGKRFSRRDNLRQHERLHVNAS 477
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 46.8 bits (106), Expect = 7e-06
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 253 VKPHSCDVCGLALMTRSHLKRHKRVHSGEKRHECAL--CGKRFSERYNLMAHAKSH 306
+K + C C + H RH R H+GEK EC+ C KRF+ R L+ H ++H
Sbjct: 1 MKSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 35.5 bits (78), Expect = 0.017
Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Query: 227 NYQCDLCGKSFIHTSSFKMHKLSHSGVKPHSCDV--CGLALMTRSHLKRHKRVH 278
+Y+C C + F H SH+G KP C C R L RH R H
Sbjct: 3 SYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 31.1 bits (67), Expect = 0.36
Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Query: 197 ISDWKCEECNKLFPSKNALQRHNNIHTGKLNYQCDL--CGKSFIHTSSFKMHKLSH 250
+ ++C C ++F + RH HTG+ ++C C K F H +H
Sbjct: 1 MKSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 45.2 bits (102), Expect = 2e-05
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Query: 205 CNKLFPSKNALQRHNNIHTGKLNYQCDLCGKSFIHTSSFKMHKLSHSGVKPHSCDVCGLA 264
CNK K ++ H H Y+CDLC F+ K H H +P+ C+ C
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE-CLKR 508
Query: 265 LMTRSHLKRHKR 276
L RHK+
Sbjct: 509 FNRLDALNRHKQ 520
Score = 44.8 bits (101), Expect = 3e-05
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Query: 233 CGKSFIHTSSFKMHKLSHSGVKPHSCDVCGLALMTRSHLKRHKRVHSGEKRHECALCGKR 292
C K + + H +H +P+ CD+C + LKRH R+H + + C C KR
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE-CLKR 508
Query: 293 FSERYNLMAH 302
F+ L H
Sbjct: 509 FNRLDALNRH 518
Score = 38.3 bits (85), Expect = 0.002
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Query: 172 YICEICGAHYKHKRACDI--HIALHKGISDWKCEECNKLFPSKNALQRHNNIHTGKLNYQ 229
Y+C G + + R ++ HI H ++C+ C F + L+RH IH Y
Sbjct: 443 YVCLYNGCNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYV 502
Query: 230 CDLCGKSFIHTSSFKMHK 247
C+ C K F + HK
Sbjct: 503 CE-CLKRFNRLDALNRHK 519
Score = 37.9 bits (84), Expect = 0.003
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 147 CTNRYTSLVRLERHKQIKHEGSKPPYICEICGAHYKHKRACDIHIALHKGISDWKCEECN 206
C R +E H I+ S PY C++C A + H+ +H+ + C EC
Sbjct: 450 CNKRIARKYNVESH--IQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVC-ECL 506
Query: 207 KLFPSKNALQRH 218
K F +AL RH
Sbjct: 507 KRFNRLDALNRH 518
Score = 29.5 bits (63), Expect = 1.1
Identities = 10/46 (21%), Positives = 22/46 (47%)
Query: 261 CGLALMTRSHLKRHKRVHSGEKRHECALCGKRFSERYNLMAHAKSH 306
C + + +++ H + H ++ + C LC F ++L H + H
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIH 495
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 43.6 bits (98), Expect = 6e-05
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 7/62 (11%)
Query: 253 VKPHSCDVCGLALMTRSHLKRHKRVHSGEKRHECAL-------CGKRFSERYNLMAHAKS 305
VK + C+ C A HLKRH R H+ EK C+ CG++FS R L+ H +
Sbjct: 67 VKQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQK 126
Query: 306 HH 307
H
Sbjct: 127 IH 128
Score = 34.3 bits (75), Expect = 0.039
Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 9/82 (10%)
Query: 206 NKLFPSKNALQRHNNIHTGKLN-YQCDLCGKSFIHTSSFKMHKLSHSGVKPHSCDV---- 260
+K S A ++ N K+ Y C+ C ++F K H SH+ KP +C
Sbjct: 47 SKPVASSTAAKKDPNAPPQKVKQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGL 106
Query: 261 ---CGLALMTRSHLKRH-KRVH 278
CG R L RH +++H
Sbjct: 107 PTGCGRQFSRRDLLLRHQQKIH 128
Score = 28.3 bits (60), Expect = 2.6
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 197 ISDWKCEECNKLFPSKNALQRHNNIHTGKLNYQC 230
+ + CE C + F L+RH HT + + C
Sbjct: 67 VKQYVCETCTRAFARLEHLKRHIRSHTNEKPFTC 100
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 41.9 bits (94), Expect = 2e-04
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Query: 199 DWKCEECNKLFPSKNALQRHNNIHTGKLNYQCDLCGKSFIHTSSFKMHKLSHSGVKPHSC 258
D E + +K L + I + ++ + CD C K F + HK HS +P C
Sbjct: 3 DHVSENSTNVLSAKRKLTEPSLIDSKRV-FPCDQCAKRFTRHENLTRHKACHSKAEPIPC 61
Query: 259 DVCGLALMTRSHLKRH-KRVHS 279
C + + LKRH +R H+
Sbjct: 62 PYCEIKCKRKDLLKRHIQRFHN 83
Score = 31.5 bits (68), Expect = 0.27
Identities = 17/48 (35%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Query: 144 CDQCTNRYTSLVRLERHKQIKHEGSKPPYICEICGAHYKHKRACDIHI 191
CDQC R+T L RHK + P C C K K HI
Sbjct: 33 CDQCAKRFTRHENLTRHKACHSKAE--PIPCPYCEIKCKRKDLLKRHI 78
Score = 29.9 bits (64), Expect = 0.84
Identities = 14/50 (28%), Positives = 19/50 (38%)
Query: 258 CDVCGLALMTRSHLKRHKRVHSGEKRHECALCGKRFSERYNLMAHAKSHH 307
CD C +L RHK HS + C C + + L H + H
Sbjct: 33 CDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFH 82
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 37.9 bits (84), Expect = 0.003
Identities = 14/47 (29%), Positives = 22/47 (46%)
Query: 261 CGLALMTRSHLKRHKRVHSGEKRHECALCGKRFSERYNLMAHAKSHH 307
C + + HL+RH+R H K C+ C + F+ L H + H
Sbjct: 33 CPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQQMH 79
Score = 35.9 bits (79), Expect = 0.013
Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Query: 211 SKNALQRHNNIHT-GKLNYQCDL--CGKSFIHTSSFKMHKLSHSGVKPHSCDVCGLALMT 267
++ L++ + H G + C C KSF + H+ +H VK SC C A
Sbjct: 8 TEKPLKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFAR 67
Query: 268 RSHLKRH 274
L RH
Sbjct: 68 SDVLNRH 74
Score = 33.1 bits (72), Expect = 0.090
Identities = 12/43 (27%), Positives = 18/43 (41%)
Query: 204 ECNKLFPSKNALQRHNNIHTGKLNYQCDLCGKSFIHTSSFKMH 246
+C K F K L+RH H + C C ++F + H
Sbjct: 32 DCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRH 74
Score = 32.3 bits (70), Expect = 0.16
Identities = 17/66 (25%), Positives = 25/66 (37%), Gaps = 3/66 (4%)
Query: 165 HEGSKPPYICEI--CGAHYKHKRACDIHIALHKGISDWKCEECNKLFPSKNALQRH-NNI 221
H P + C C + K H H+ + + C CN+ F + L RH +
Sbjct: 19 HRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQQM 78
Query: 222 HTGKLN 227
H K N
Sbjct: 79 HLQKQN 84
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 33.9 bits (74), Expect = 0.052
Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Query: 224 GKLNYQCDL--CGKSFIHTSSFKMHKLSHSGVKPHSCDVCGLALMTRSHLKRH 274
G + Y+CD C KSF + H SH+ K C C + L RH
Sbjct: 13 GDIRYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRH 65
Score = 32.7 bits (71), Expect = 0.12
Identities = 17/57 (29%), Positives = 23/57 (40%), Gaps = 2/57 (3%)
Query: 192 ALHKGISDWKCE--ECNKLFPSKNALQRHNNIHTGKLNYQCDLCGKSFIHTSSFKMH 246
A +G +KC+ C K F K +RH HT + C C SF + H
Sbjct: 9 AYQEGDIRYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRH 65
Score = 31.9 bits (69), Expect = 0.21
Identities = 15/54 (27%), Positives = 21/54 (38%), Gaps = 2/54 (3%)
Query: 256 HSCDV--CGLALMTRSHLKRHKRVHSGEKRHECALCGKRFSERYNLMAHAKSHH 307
+ CD C + + H +RH R H+ K C C F+ L H H
Sbjct: 17 YKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHVNQKH 70
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 31.9 bits (69), Expect = 0.21
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 6/81 (7%)
Query: 207 KLFPSKNALQRHNNIHTGKLNYQCDLCG-KSFIHTSSFKM--HKLSHSGVKPHSCDV--C 261
+L + N++ H K + D C K + TS F + H SH+G KP C V C
Sbjct: 54 RLISNINSILDHIGNRRPKYTCEWDDCPRKGMVQTSRFALVAHLRSHTGEKPFICSVPEC 113
Query: 262 GLALMTRSHLKRHKR-VHSGE 281
+ L +H R VH +
Sbjct: 114 DRSFTRSDALAKHMRTVHEAD 134
Score = 29.5 bits (63), Expect = 1.1
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query: 258 CDVCGLALMTRSHLKRHKRVHSGEKRHECAL--CGKRFSERYNLMAHAKSHH 307
C G+ +R L H R H+GEK C++ C + F+ L H ++ H
Sbjct: 80 CPRKGMVQTSRFALVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMRTVH 131
>SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 637
Score = 31.1 bits (67), Expect = 0.36
Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Query: 147 CTNRYTSLVRLERHKQIKHEGSKPPYICEICG--AHYKHKRACDIHIALHKG 196
C ++ L RH+ H ++P + CEICG H+ A H+ + G
Sbjct: 585 CNTVFSRTYDLIRHQDTIHAKTRPVFRCEICGDQRHFSRHDALVRHLRVKHG 636
>SPAC6B12.08 |mug185||DNAJ domain protein Jjj
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 380
Score = 27.9 bits (59), Expect = 3.4
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 202 CEECNKLFPSKNALQRHNNIHTGKLN 227
C CNK F S+N L+ H N K N
Sbjct: 272 CMVCNKNFRSQNQLENHENSKKHKKN 297
>SPAC22E12.11c |set3||histone lysine methyltransferase
Set3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 859
Score = 27.5 bits (58), Expect = 4.5
Identities = 14/37 (37%), Positives = 15/37 (40%)
Query: 53 GGTNAEEAHRLSVHSGMNSGNNGAFNDVKTEDSADGS 89
G A H S G N+G NGA T S GS
Sbjct: 91 GKNGASPTHSASPRQGNNTGANGALFSQSTNSSNSGS 127
>SPAC10F6.17c ||SPAC56E4.01c|mitochondrial pyruvate dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 444
Score = 27.1 bits (57), Expect = 5.9
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 177 CGAHYKHKRACDIHIALHKGISD 199
C A Y H+ AC +AL K IS+
Sbjct: 147 CTASYYHQNACPSSLALDKSISE 169
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 26.6 bits (56), Expect = 7.8
Identities = 27/104 (25%), Positives = 37/104 (35%), Gaps = 8/104 (7%)
Query: 160 HKQIKHEGSKPPYICEICGAHYKHKRACDIHIALHKGI--SDWKCEE-CNKLFPSKNALQ 216
H Q+KH C C K + C HI ++ + +C E CNKL K
Sbjct: 654 HPQVKHNCHPTSEPCPPCPYFVKKRCLCGKHILENQPCYRENVRCGELCNKLLSCKTHFC 713
Query: 217 RHNNIHTGKLNYQCDL-CGKSFIHTSSFKMHKLSHSGVKPHSCD 259
G+ C CGK ++ H+G H CD
Sbjct: 714 EKLCHPDGECESSCKKECGKRRMYCEHV-CQSPCHAG---HPCD 753
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.319 0.132 0.417
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,979,914
Number of Sequences: 5004
Number of extensions: 73891
Number of successful extensions: 286
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 206
Number of HSP's gapped (non-prelim): 54
length of query: 491
length of database: 2,362,478
effective HSP length: 76
effective length of query: 415
effective length of database: 1,982,174
effective search space: 822602210
effective search space used: 822602210
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 56 (26.6 bits)
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