Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002189-TA|BGIBMGA002189-PA|IPR007087|Zinc finger,
C2H2-type
(491 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein ... 109 2e-25
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 42 4e-05
AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific tran... 38 5e-04
CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein... 32 0.030
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 26 2.0
DQ230894-1|ABD94313.1| 315|Anopheles gambiae zinc finger protei... 25 3.5
DQ230893-1|ABD94311.1| 315|Anopheles gambiae zinc finger protei... 25 4.6
>AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein
protein.
Length = 680
Score = 109 bits (261), Expect = 2e-25
Identities = 56/170 (32%), Positives = 82/170 (48%), Gaps = 4/170 (2%)
Query: 142 HQCDQCTNRYTSLVRLERHKQIKHEGSKPPYICEICGAHYKHKRACDIHIALHKGISDWK 201
H+C C N +T+ L RH + +H +P + C C HI H G ++
Sbjct: 183 HRCKHCDNCFTTSGELIRHIRYRHTHERP-HKCTECDYASVELSKLKRHIRTHTGEKPFQ 241
Query: 202 CEECNKLFPSKNALQRHNNIHTGKLNYQCDLCGKSFIHTSSFKMHKLSHS-GVKP-HSCD 259
C C P K L RH IHTG+ Y CD+C F ++S K HK+ H G KP C
Sbjct: 242 CPHCTYASPDKFKLTRHMRIHTGEKPYSCDVCFARFTQSNSLKAHKMIHQVGNKPVFQCK 301
Query: 260 VCGLALMTRSHLKRH-KRVHSGEKRHECALCGKRFSERYNLMAHAKSHHG 308
+C ++ L+ H + +H+ +K +C C F +RY+ HAK+H G
Sbjct: 302 LCPTTCGRKTDLRIHVQNLHTADKPIKCKRCDSTFPDRYSYKMHAKTHEG 351
Score = 102 bits (244), Expect = 3e-23
Identities = 50/166 (30%), Positives = 77/166 (46%), Gaps = 3/166 (1%)
Query: 142 HQCDQCTNRYTSLVRLERHKQIKHEGSKPPYICEICGAHYKHKRACDIHIALHKGISDWK 201
+ C+ C L L RH +K P+ C +C +K + H+ H G +
Sbjct: 127 YMCNYCNYTSNKLFLLSRH--LKTHSEDRPHKCVVCERGFKTLASLQNHVNTHTGTKPHR 184
Query: 202 CEECNKLFPSKNALQRHNNI-HTGKLNYQCDLCGKSFIHTSSFKMHKLSHSGVKPHSCDV 260
C+ C+ F + L RH HT + ++C C + + S K H +H+G KP C
Sbjct: 185 CKHCDNCFTTSGELIRHIRYRHTHERPHKCTECDYASVELSKLKRHIRTHTGEKPFQCPH 244
Query: 261 CGLALMTRSHLKRHKRVHSGEKRHECALCGKRFSERYNLMAHAKSH 306
C A + L RH R+H+GEK + C +C RF++ +L AH H
Sbjct: 245 CTYASPDKFKLTRHMRIHTGEKPYSCDVCFARFTQSNSLKAHKMIH 290
Score = 101 bits (242), Expect = 4e-23
Identities = 52/175 (29%), Positives = 77/175 (44%), Gaps = 10/175 (5%)
Query: 142 HQCDQCTNRYTSLVRLERHKQIKHEGSKPPYICEICGAHYKHKRACDIHIA-LHKGISDW 200
+ CD C R+T L+ HK I G+KP + C++C K IH+ LH
Sbjct: 268 YSCDVCFARFTQSNSLKAHKMIHQVGNKPVFQCKLCPTTCGRKTDLRIHVQNLHTADKPI 327
Query: 201 KCEECNKLFPSKNALQRHNNIHTGKLNYQCDLCGKSFIHTSSFKMHKLSHSGVKPHSCDV 260
KC+ C+ FP + + + H H G+ Y+C+ C + I + H L H+ KP+ CD
Sbjct: 328 KCKRCDSTFPDRYSYKMHAKTHEGEKCYRCEYCPYASISMRHLESHLLLHTDQKPYKCDQ 387
Query: 261 CGLALMTRSHLKRHKRVHSG---------EKRHECALCGKRFSERYNLMAHAKSH 306
C + LKRH + K H C C + F + NL+ H H
Sbjct: 388 CAQTFRQKQLLKRHMNYYHNPDYVAPTPKAKTHICPTCKRPFRHKGNLIRHMAMH 442
Score = 97.9 bits (233), Expect = 5e-22
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 5/168 (2%)
Query: 143 QCDQCTNRYTSLVRLERHKQIKHEGSKPPYICEICGAHYKHKRACDIHIALHKGISD--W 200
QC CT +L RH +I H G KP Y C++C A + + H +H+ + +
Sbjct: 241 QCPHCTYASPDKFKLTRHMRI-HTGEKP-YSCDVCFARFTQSNSLKAHKMIHQVGNKPVF 298
Query: 201 KCEECNKLFPSKNALQRH-NNIHTGKLNYQCDLCGKSFIHTSSFKMHKLSHSGVKPHSCD 259
+C+ C K L+ H N+HT +C C +F S+KMH +H G K + C+
Sbjct: 299 QCKLCPTTCGRKTDLRIHVQNLHTADKPIKCKRCDSTFPDRYSYKMHAKTHEGEKCYRCE 358
Query: 260 VCGLALMTRSHLKRHKRVHSGEKRHECALCGKRFSERYNLMAHAKSHH 307
C A ++ HL+ H +H+ +K ++C C + F ++ L H +H
Sbjct: 359 YCPYASISMRHLESHLLLHTDQKPYKCDQCAQTFRQKQLLKRHMNYYH 406
Score = 84.6 bits (200), Expect = 5e-18
Identities = 42/138 (30%), Positives = 60/138 (43%), Gaps = 1/138 (0%)
Query: 172 YICEICGAHYKHKRACDIHIALHKGISDWKCEECNKLFPSKNALQRHNNIHTGKLNYQCD 231
Y+C C H+ H KC C + F + +LQ H N HTG ++C
Sbjct: 127 YMCNYCNYTSNKLFLLSRHLKTHSEDRPHKCVVCERGFKTLASLQNHVNTHTGTKPHRCK 186
Query: 232 LCGKSFIHTSSFKMH-KLSHSGVKPHSCDVCGLALMTRSHLKRHKRVHSGEKRHECALCG 290
C F + H + H+ +PH C C A + S LKRH R H+GEK +C C
Sbjct: 187 HCDNCFTTSGELIRHIRYRHTHERPHKCTECDYASVELSKLKRHIRTHTGEKPFQCPHCT 246
Query: 291 KRFSERYNLMAHAKSHHG 308
+++ L H + H G
Sbjct: 247 YASPDKFKLTRHMRIHTG 264
Score = 68.1 bits (159), Expect = 5e-13
Identities = 35/112 (31%), Positives = 50/112 (44%), Gaps = 1/112 (0%)
Query: 198 SDWKCEECNKLFPSKNALQRHNNIHTGKLNYQCDLCGKSFIHTSSFKMHKLSHSGVKPHS 257
S + C CN L RH H+ ++C +C + F +S + H +H+G KPH
Sbjct: 125 STYMCNYCNYTSNKLFLLSRHLKTHSEDRPHKCVVCERGFKTLASLQNHVNTHTGTKPHR 184
Query: 258 CDVCGLALMTRSHLKRHKRV-HSGEKRHECALCGKRFSERYNLMAHAKSHHG 308
C C T L RH R H+ E+ H+C C E L H ++H G
Sbjct: 185 CKHCDNCFTTSGELIRHIRYRHTHERPHKCTECDYASVELSKLKRHIRTHTG 236
Score = 60.5 bits (140), Expect = 1e-10
Identities = 38/148 (25%), Positives = 57/148 (38%), Gaps = 10/148 (6%)
Query: 143 QCDQCTNRYTSLVRLERHKQIKHEGSKPPYICEICGAHYKHKRACDIHIALHKGISDWKC 202
QC C L H Q H KP C+ C + + + + +H H+G ++C
Sbjct: 299 QCKLCPTTCGRKTDLRIHVQNLHTADKP-IKCKRCDSTFPDRYSYKMHAKTHEGEKCYRC 357
Query: 203 EECNKLFPSKNALQRHNNIHTGKLNYQCDLCGKSFIHTSSFKMHKLSHSG---------V 253
E C S L+ H +HT + Y+CD C ++F K H +
Sbjct: 358 EYCPYASISMRHLESHLLLHTDQKPYKCDQCAQTFRQKQLLKRHMNYYHNPDYVAPTPKA 417
Query: 254 KPHSCDVCGLALMTRSHLKRHKRVHSGE 281
K H C C + +L RH +H E
Sbjct: 418 KTHICPTCKRPFRHKGNLIRHMAMHDPE 445
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 41.9 bits (94), Expect = 4e-05
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Query: 256 HSCDVCGLALMTRSHLKRHKRVHSGEKRHECALCGKRFSERYNLMAHAKSHH 307
+SC C + R H H +H + HEC +CG++F+ R N+ AH K H
Sbjct: 899 YSCVSCHKTVSNRWH---HANIHRPQS-HECPVCGQKFTRRDNMKAHCKVKH 946
Score = 31.5 bits (68), Expect = 0.053
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
Query: 200 WKCEECNKLFPSKNALQRHNNIHTGKLNYQCDLCGKSFIHTSSFKMH-KLSH 250
+ C C+K ++ H NIH + +++C +CG+ F + K H K+ H
Sbjct: 899 YSCVSCHKTVSNR---WHHANIHRPQ-SHECPVCGQKFTRRDNMKAHCKVKH 946
Score = 31.1 bits (67), Expect = 0.070
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 4/56 (7%)
Query: 228 YQCDLCGKSFIHTSSFKMHKLSHSGVKPHSCDVCGLALMTRSHLKRHKRVHSGEKR 283
Y C C K T S + H + + H C VCG R ++K H +V E R
Sbjct: 899 YSCVSCHK----TVSNRWHHANIHRPQSHECPVCGQKFTRRDNMKAHCKVKHPELR 950
Score = 24.6 bits (51), Expect = 6.1
Identities = 7/24 (29%), Positives = 14/24 (58%)
Query: 142 HQCDQCTNRYTSLVRLERHKQIKH 165
H+C C ++T ++ H ++KH
Sbjct: 923 HECPVCGQKFTRRDNMKAHCKVKH 946
>AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific
transcription factor FRU-MB protein.
Length = 759
Score = 38.3 bits (85), Expect = 5e-04
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 252 GVKPHSCDVCGLALMTRSHLKRHKRVHSGEKRHECALCGKRFSERYNLMAHAKSHH 307
G H C +CG + +H++ H VH R EC LC ++ NL H K H
Sbjct: 496 GCNLHRCKLCGKVV---THIRNHYHVHF-PGRFECPLCRATYTRSDNLRTHCKFKH 547
>CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein
protein.
Length = 415
Score = 32.3 bits (70), Expect = 0.030
Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 258 CDVCGLALMTRSHLKRHK-RVHSGEKRH---ECALCGKRFSERYNLMAHAKSHH 307
C++C ++ T+ ++H+ VH + +C +C K FS+R + H ++ H
Sbjct: 351 CNLCDMSYRTKLQYQKHEYEVHRISNENFGIKCTICHKLFSQRQDYQLHMRAIH 404
Score = 26.2 bits (55), Expect = 2.0
Identities = 20/87 (22%), Positives = 37/87 (42%), Gaps = 13/87 (14%)
Query: 228 YQCDLCGKSFIHTSSFKMHKLSHSGVKPHSCDVCGLALMTRSHLKRHKR-------VHSG 280
Y+C CG F+ ++F +HS K + D G+A+ + ++ + R + S
Sbjct: 292 YRCPACGNLFVELTNF----YNHSCTKAPAQD--GVAVASSNNQSQPARTGGSAVTITSE 345
Query: 281 EKRHECALCGKRFSERYNLMAHAKSHH 307
+R +C LC + + H H
Sbjct: 346 GQRFQCNLCDMSYRTKLQYQKHEYEVH 372
Score = 25.0 bits (52), Expect = 4.6
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 6/60 (10%)
Query: 163 IKHEGSKPPYICEICGAHYKHKRACDIH-IALHKGISD---WKCEECNKLFPSKNALQRH 218
I EG + + C +C Y+ K H +H+ ++ KC C+KLF + Q H
Sbjct: 342 ITSEGQR--FQCNLCDMSYRTKLQYQKHEYEVHRISNENFGIKCTICHKLFSQRQDYQLH 399
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 26.2 bits (55), Expect = 2.0
Identities = 23/89 (25%), Positives = 35/89 (39%), Gaps = 7/89 (7%)
Query: 197 ISDWKCEECNKLFPSKNALQRHNNIHTGKLNYQCDLCG-----KSFIHTSSFKMHKLSHS 251
+++W + L P K L ++ +G N ++CG K I +H H
Sbjct: 694 VNNWMVQHKLSLAPEKTELLMISSKRSGYRNIPVNICGVEVRSKRSIRYLGVMLH--DHL 751
Query: 252 GVKPHSCDVCGLALMTRSHLKRHKRVHSG 280
+PH V AL L+ R HSG
Sbjct: 752 SWRPHVEMVADKALRVVRALRGIMRNHSG 780
>DQ230894-1|ABD94313.1| 315|Anopheles gambiae zinc finger protein
183 protein.
Length = 315
Score = 25.4 bits (53), Expect = 3.5
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Query: 43 CELCGETGD-KGGTNAEEAHRLSVHSGMNSGNNGAFNDVKTEDSADGSESPFK-YTFKES 100
C+ + D K G E+ S H+ + G++ +D K E +D E PFK Y +ES
Sbjct: 196 CKFLHDRSDYKHGWQMEQEGAGSGHN--HGGDDSDGDDTKYEIHSDDEELPFKCYVCRES 253
Query: 101 LL 102
+
Sbjct: 254 FV 255
>DQ230893-1|ABD94311.1| 315|Anopheles gambiae zinc finger protein
183 protein.
Length = 315
Score = 25.0 bits (52), Expect = 4.6
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Query: 43 CELCGETGD-KGGTNAEEAHRLSVHSGMNSGNNGAFNDVKTEDSADGSESPFK-YTFKES 100
C+ + D K G E+ S H+ + G++ +D K E +D E PFK Y +ES
Sbjct: 196 CKFLHDRSDYKHGWQMEQEGGGSGHN--HGGDDSDGDDTKYEIHSDDEELPFKCYVCRES 253
Query: 101 LL 102
+
Sbjct: 254 FV 255
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.319 0.132 0.417
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 468,164
Number of Sequences: 2123
Number of extensions: 18310
Number of successful extensions: 89
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 54
Number of HSP's gapped (non-prelim): 21
length of query: 491
length of database: 516,269
effective HSP length: 67
effective length of query: 424
effective length of database: 374,028
effective search space: 158587872
effective search space used: 158587872
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 50 (24.2 bits)
- SilkBase 1999-2023 -