GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002187-TA|BGIBMGA002187-PA|IPR008705|Nanos RNA-binding
         (256 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.           75   3e-15
AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.     75   3e-15
AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    26   0.93 
X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.     26   1.2  
AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein p...    26   1.2  
AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge...    25   2.1  
AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein p...    25   2.1  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    25   2.8  
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              24   3.7  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    24   4.9  
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr...    24   4.9  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    24   4.9  

>AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.
          Length = 259

 Score = 74.5 bits (175), Expect = 3e-15
 Identities = 35/70 (50%), Positives = 41/70 (58%), Gaps = 1/70 (1%)

Query: 113 RKLERIRGDDATRTNEECRFCKNNGERAAYYRSHALRDAAGRVACPVLRAFVCARCGARG 172
           R L + R + +T   + C FC NN      Y SH  +D AG V CPVL+ FVC RC A G
Sbjct: 140 RPLRKCR-NKSTCELDHCVFCFNNKADREVYESHRCKDEAGNVTCPVLQTFVCMRCKATG 198

Query: 173 DAAHTAKYCP 182
             AHTAKYCP
Sbjct: 199 TKAHTAKYCP 208


>AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.
          Length = 260

 Score = 74.5 bits (175), Expect = 3e-15
 Identities = 35/70 (50%), Positives = 41/70 (58%), Gaps = 1/70 (1%)

Query: 113 RKLERIRGDDATRTNEECRFCKNNGERAAYYRSHALRDAAGRVACPVLRAFVCARCGARG 172
           R L + R + +T   + C FC NN      Y SH  +D AG V CPVL+ FVC RC A G
Sbjct: 141 RPLRKCR-NKSTCELDHCVFCFNNKADREVYESHRCKDEAGNVTCPVLQTFVCMRCKATG 199

Query: 173 DAAHTAKYCP 182
             AHTAKYCP
Sbjct: 200 TKAHTAKYCP 209


>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 26.2 bits (55), Expect = 0.93
 Identities = 17/38 (44%), Positives = 17/38 (44%), Gaps = 7/38 (18%)

Query: 144 RSHALRDAAGRVACPVLRAFVCARCGARGDAAHTAKYC 181
           R H  RD       PV R   C RCGA G   H AK C
Sbjct: 396 RGHLARDCQS----PVDRQQACIRCGADG---HYAKSC 426


>X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.
          Length = 696

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 14/41 (34%), Positives = 19/41 (46%)

Query: 46  YSRQVSWPAPERSPKVPLPGSHWTSGLSSPPVRNETLTPPA 86
           ++ Q + P P+RSP    P       +S     N T TPPA
Sbjct: 436 FTAQSTSPGPDRSPATLTPSPGIGGPISPLDPGNVTPTPPA 476


>AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein
           protein.
          Length = 429

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 17/46 (36%), Positives = 19/46 (41%), Gaps = 3/46 (6%)

Query: 136 NGERAAYYRSHALRDAAGRVACPVLRAFVCARCGARGDAAHTAKYC 181
           N ++   YR       A     PV R   C RCGA G   H AK C
Sbjct: 358 NLQQQRCYRCLERGHIARECRSPVDRQKACIRCGAEG---HLAKDC 400


>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine
           dehydrogenase protein.
          Length = 1325

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 13/30 (43%), Positives = 21/30 (70%), Gaps = 1/30 (3%)

Query: 79  NETLTPPAASQVQPTEEQLR-VLSSLPDAV 107
           N+T+   AA QV+ T E+L+ V+ +L DA+
Sbjct: 664 NQTIAQRAARQVKVTYEELQPVIVTLEDAI 693


>AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein
           protein.
          Length = 468

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 14/36 (38%), Positives = 16/36 (44%), Gaps = 4/36 (11%)

Query: 144 RSHALRDAAGRVACPVLRAFVCARCGARGDAAHTAK 179
           R H  RD       PV  + VC RCG  G  A T +
Sbjct: 412 RGHVSRDCHS----PVNHSNVCIRCGTSGHLAATCE 443


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 17/44 (38%), Positives = 18/44 (40%), Gaps = 3/44 (6%)

Query: 138 ERAAYYRSHALRDAAGRVACPVLRAFVCARCGARGDAAHTAKYC 181
           ER   YR   L   A     P  R  +C RCG  G   H AK C
Sbjct: 658 ERVRCYRCLELGHWAHDCRSPDDRQNMCIRCGVVG---HMAKVC 698


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 11/20 (55%), Positives = 11/20 (55%)

Query: 158 PVLRAFVCARCGARGDAAHT 177
           PV R  VC RCG  G  A T
Sbjct: 567 PVDRQNVCIRCGQEGHKAGT 586


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 11/30 (36%), Positives = 15/30 (50%)

Query: 133 CKNNGERAAYYRSHALRDAAGRVACPVLRA 162
           CK  G+   + R+H      GR  CP+ RA
Sbjct: 502 CKLCGKVVTHIRNHYHVHFPGRFECPLCRA 531


>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
           protease protein.
          Length = 1322

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 5/74 (6%)

Query: 41  TQWNTYSRQVSWPAPERSPKVPLPGSHWTSGLSSPPVRNETLTPPAASQVQPTEEQLRVL 100
           T  N Y    +  AP   P+       +  GL   P+ +  L PP  +  +P E   +  
Sbjct: 601 TPRNNYKPSSAAAAPYVLPRASEVNDFFYGGLEPVPLASWQLPPPYVT--EPVEGPAK-- 656

Query: 101 SSLPDAVLYTLLRK 114
              P++V+Y + R+
Sbjct: 657 -KEPESVVYPIYRR 669


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
          protein.
          Length = 541

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 9/13 (69%), Positives = 10/13 (76%)

Query: 64 PGSHWTSGLSSPP 76
          PGSH   GLS+PP
Sbjct: 12 PGSHRPPGLSNPP 24


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.317    0.132    0.415 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 271,252
Number of Sequences: 2123
Number of extensions: 10705
Number of successful extensions: 29
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 20
Number of HSP's gapped (non-prelim): 12
length of query: 256
length of database: 516,269
effective HSP length: 63
effective length of query: 193
effective length of database: 382,520
effective search space: 73826360
effective search space used: 73826360
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 47 (23.0 bits)