Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002186-TA|BGIBMGA002186-PA|IPR012335|Thioredoxin fold,
IPR000866|Alkyl hydroperoxide reductase/ Thiol specific antioxidant/
Mal allergen, IPR012336|Thioredoxin-like fold
(195 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0116 + 19901546-19901737,19901825-19901899,19902034-199021... 136 8e-33
07_03_1427 + 26495072-26495148,26495323-26495468,26495581-264957... 91 4e-19
04_03_0889 + 20568984-20569037,20569271-20569345,20569981-205700... 91 4e-19
07_03_1428 + 26498201-26498318,26498422-26498570,26498685-26499080 82 3e-16
06_01_0671 - 4899611-4899829,4900870-4901448 71 8e-13
02_01_0691 - 5167260-5167937 41 6e-04
06_01_0785 - 5873244-5873357,5873458-5873562,5874333-5874424,587... 30 1.4
01_01_0288 - 2373764-2373923,2374016-2374398,2375426-2375710 29 1.9
02_03_0183 + 16106205-16106474 28 4.3
11_04_0291 - 15851647-15852252,15853995-15854136,15854666-158548... 27 7.6
08_02_1257 - 25646029-25646054,25646139-25646236,25646609-256467... 27 7.6
09_06_0046 + 20467240-20467586,20467627-20468116,20468815-20469426 27 10.0
05_01_0169 - 1170614-1172098 27 10.0
03_02_0999 - 13105030-13105434,13105716-13105850,13105933-131061... 27 10.0
>02_04_0116 +
19901546-19901737,19901825-19901899,19902034-19902115,
19902219-19902298,19903279-19903482,19903625-19903750,
19903872-19903985,19904802-19904918
Length = 329
Score = 136 bits (330), Expect = 8e-33
Identities = 62/115 (53%), Positives = 83/115 (72%), Gaps = 1/115 (0%)
Query: 78 FTHLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGLFIIDDKQNLRQ 137
F+HLAW+ T RK GGLG + PLISD + IS+ +GVL + GI RGLFIID + ++
Sbjct: 212 FSHLAWVQTDRKSGGLGDLKYPLISDVTKSISKSFGVLIPDQGIALRGLFIIDKEGVIQH 271
Query: 138 ITINDLPVGRSVEETLRLVQAFQFT-DKHGEVCPANWRPGAKTIKPDTKAAQEYF 191
TIN+L +GRSV+ET+R +QA Q+ D EVCPA W+PG K++KPD K ++EYF
Sbjct: 272 STINNLAIGRSVDETMRTLQALQYVQDNPDEVCPAGWKPGDKSMKPDPKGSKEYF 326
Score = 96.3 bits (229), Expect = 1e-20
Identities = 45/69 (65%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 9 APQFKATAVVNGEFKDISLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGC 67
AP F A AV + EF ++ LSDY GK YV+LFFYPLDFTFVCPTEI AFS++ DEF K+
Sbjct: 74 APDFDAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYDEFEKLNT 133
Query: 68 EVLGASTDS 76
E+LG S DS
Sbjct: 134 EILGVSIDS 142
>07_03_1427 +
26495072-26495148,26495323-26495468,26495581-26495729,
26495829-26496224
Length = 255
Score = 91.5 bits (217), Expect = 4e-19
Identities = 53/165 (32%), Positives = 83/165 (50%), Gaps = 7/165 (4%)
Query: 25 ISLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGASTDSHFTHLAW 83
I + D+ G YV+LF +P DFT VC TE+ A + A EF K G ++LG S D +H W
Sbjct: 57 IRIHDFVGDTYVILFSHPGDFTPVCTTELAAMAGYAKEFDKRGVKLLGISCDDVQSHKDW 116
Query: 84 INTPRKQGGLGPMNIPLISDKSHRISRDYGVLD----EETG--IPFRGLFIIDDKQNLRQ 137
I + P+++D S + ++D + G +P R L I+ + ++
Sbjct: 117 IKDIEAYKPGNRVTYPIMADPSREAIKQLNMVDPDEKDSNGGHLPSRALHIVGPDKKVKL 176
Query: 138 ITINDLPVGRSVEETLRLVQAFQFTDKHGEVCPANWRPGAKTIKP 182
+ VGR+++E +R V A Q KH P NW+PG + + P
Sbjct: 177 SFLYPACVGRNMDEVVRAVDALQTAAKHAVATPVNWKPGERVVIP 221
>04_03_0889 +
20568984-20569037,20569271-20569345,20569981-20570088,
20572066-20572179,20572393-20572509
Length = 155
Score = 91.5 bits (217), Expect = 4e-19
Identities = 42/80 (52%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
Query: 113 GVLDEETGIPFRGLFIIDDKQNLRQITINDLPVGRSVEETLRLVQAFQFTDKH-GEVCPA 171
GV + GI RGLFIID + ++ TIN+L +GRSV+ETLR +QA Q+ ++ EVCPA
Sbjct: 73 GVSIDSVGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPA 132
Query: 172 NWRPGAKTIKPDTKAAQEYF 191
W+PG K++KPD K ++EYF
Sbjct: 133 GWKPGEKSMKPDPKDSKEYF 152
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/31 (58%), Positives = 21/31 (67%)
Query: 46 FVCPTEIIAFSEKADEFRKIGCEVLGASTDS 76
FV EI AFS++ +EF KI EVLG S DS
Sbjct: 48 FVSSAEITAFSDRYEEFEKINTEVLGVSIDS 78
>07_03_1428 + 26498201-26498318,26498422-26498570,26498685-26499080
Length = 220
Score = 81.8 bits (193), Expect = 3e-16
Identities = 50/172 (29%), Positives = 81/172 (47%), Gaps = 7/172 (4%)
Query: 25 ISLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGASTDSHFTHLAW 83
I L D+ G YV++F +P DFT VC TE+ + A EF K G ++LG S D +H W
Sbjct: 22 IRLHDFVGDAYVIIFSHPADFTPVCTTELSEMAGYAGEFDKRGVKLLGFSCDDVESHKDW 81
Query: 84 INTPRKQGGLGPMNIPLISDKSHRISRDYGVLD---EETG---IPFRGLFIIDDKQNLRQ 137
I + P+++D R ++D ++T +P R L I+ + ++
Sbjct: 82 IKDIEAYKPGRRVGFPIVADPDREAIRQLNMIDADEKDTAGGELPNRALHIVGPDKKVKL 141
Query: 138 ITINDLPVGRSVEETLRLVQAFQFTDKHGEVCPANWRPGAKTIKPDTKAAQE 189
+ GR++ E LR A +H P NW+PG + + P + +E
Sbjct: 142 SFLFPACTGRNMAEVLRATDALLTAARHRVATPVNWKPGERVVIPPGVSDEE 193
>06_01_0671 - 4899611-4899829,4900870-4901448
Length = 265
Score = 70.5 bits (165), Expect = 8e-13
Identities = 42/135 (31%), Positives = 78/135 (57%), Gaps = 8/135 (5%)
Query: 25 ISLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGASTDSHFTHLAWI 84
+SLS +KG+ VV++FYP D T C + AF + ++F+K G EV+G S D +H +
Sbjct: 137 VSLSKFKGRPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDAASHKEF- 195
Query: 85 NTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETG-IPFRGLFIIDDKQNLRQITINDL 143
+K+ L P L+SD+ +++ +++GV + G +P R +++D ++ I N
Sbjct: 196 ---KKKYKL-PFT--LLSDEGNKVRKEWGVPADLFGTLPGRQTYVLDKNGVVQYIYNNQF 249
Query: 144 PVGRSVEETLRLVQA 158
+ + ETL+++Q+
Sbjct: 250 QPEKHIGETLKILQS 264
>02_01_0691 - 5167260-5167937
Length = 225
Score = 41.1 bits (92), Expect = 6e-04
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 19 NGEFKDISLSDYK-GKYVVLFFYPLDFTFVCPTEII-AFSEKADEFRKIGCEVLGA-STD 75
+GE K +++++ G+ VLF P FT C + + F EKA E G + + S +
Sbjct: 81 DGELKTVTVAELTAGRKAVLFAVPGAFTPTCSQKHLPGFIEKAGELHAKGVDAIACVSVN 140
Query: 76 SHFTHLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGV 114
F AW ++ GLG ++ L+SD + ++R GV
Sbjct: 141 DAFVMRAW----KESLGLGDADVLLLSDGNLELTRALGV 175
>06_01_0785 -
5873244-5873357,5873458-5873562,5874333-5874424,
5874525-5874594,5875080-5875202,5875287-5875372,
5875547-5875648,5875874-5876096,5876217-5876282,
5876407-5876497,5876574-5876701,5877734-5877749,
5878171-5878318,5878440-5878511,5878586-5878690,
5879122-5879291,5880093-5880424
Length = 680
Score = 29.9 bits (64), Expect = 1.4
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 6/70 (8%)
Query: 55 FSEKADEFRKIGC--EVLGAST-DSHFTHLAWINTPRKQGGLGPMNIPLISDKSHRISRD 111
FSE D +++ EV+ T D+ FT W+ G LG N + S + H R
Sbjct: 272 FSESGDLTKRVEHTNEVISVYTLDAEFTRPLWVFGISSYGFLGESNHIVFSYRQH--GRS 329
Query: 112 Y-GVLDEETG 120
Y GVLD + G
Sbjct: 330 YLGVLDSDIG 339
>01_01_0288 - 2373764-2373923,2374016-2374398,2375426-2375710
Length = 275
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/53 (28%), Positives = 28/53 (52%)
Query: 88 RKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGLFIIDDKQNLRQITI 140
+K+ G G N+P D R ++DY +DE+ +P F I D++ + + +
Sbjct: 65 KKKKGSGAGNLPGAIDAEIREAQDYLAIDEQEPVPENFPFEILDEEGMSVVIL 117
>02_03_0183 + 16106205-16106474
Length = 89
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 99 PLISDKSHRISRDYGVLDEETGIP 122
PL S HR SR +G L E +G P
Sbjct: 59 PLASSHEHRFSRLHGCLPESSGFP 82
>11_04_0291 -
15851647-15852252,15853995-15854136,15854666-15854881,
15854957-15855052,15855147-15855259,15856516-15856727,
15856842-15856939,15857066-15857186,15857291-15857508,
15857657-15857837,15857919-15858207,15858303-15858367,
15858480-15858591
Length = 822
Score = 27.5 bits (58), Expect = 7.6
Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Query: 146 GRSVEETLRLVQAFQFTDKHGEV--CPAN 172
G S+EE L LV F D HGE+ C +N
Sbjct: 559 GGSMEEMLNLVALFDKWDDHGEIGFCSSN 587
>08_02_1257 -
25646029-25646054,25646139-25646236,25646609-25646700,
25646786-25646893,25647212-25647346,25647648-25647752,
25647951-25648088,25648865-25648963,25649079-25649195,
25649446-25649610,25649955-25650014,25650395-25650559,
25650636-25650746,25651220-25651333,25651466-25651531,
25651857-25651994,25652303-25652386,25652468-25652510,
25652621-25652676,25652772-25652880,25652944-25653026,
25653127-25653210,25653383-25653454,25653557-25653634,
25653717-25653800,25653892-25653962,25654095-25654164,
25654314-25654403,25654500-25654661,25654702-25654817,
25654946-25654988,25655069-25655185,25655897-25656046
Length = 1082
Score = 27.5 bits (58), Expect = 7.6
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 49 PTE--IIAFSEKADEFRKIGCEVLGASTDSHFTHLAWINTPRKQGGL 93
PTE I+++ K F +IG + A + S H+ N+ +K+GG+
Sbjct: 561 PTEKAILSWGLKFFHFEQIGMDFNDARSKSQILHVFPFNSEKKRGGV 607
>09_06_0046 + 20467240-20467586,20467627-20468116,20468815-20469426
Length = 482
Score = 27.1 bits (57), Expect = 10.0
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 60 DEFRKIGCEVLGASTDSHFTHLAWINT 86
D + I +++GA+TD+ F L WI T
Sbjct: 272 DNVKAIIKDIMGAATDTSFVTLEWIMT 298
>05_01_0169 - 1170614-1172098
Length = 494
Score = 27.1 bits (57), Expect = 10.0
Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 38 FFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGASTDSHF 78
F L F+CP+ ++ SE + F K G ++ A T++ +
Sbjct: 397 FLAGLVLNFICPSAVLPLSELVNIFSKFG-PIMEAKTENAY 436
>03_02_0999 -
13105030-13105434,13105716-13105850,13105933-13106133,
13106374-13106673,13106764-13106964,13107246-13107410,
13107484-13107663,13108171-13108212,13108327-13108404
Length = 568
Score = 27.1 bits (57), Expect = 10.0
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query: 142 DLPVGRSVEETLRLVQAFQFTDKHGEVCPANWRPGAKTIKPD 183
DL +G+S EET + + KH E PA P KT K D
Sbjct: 441 DLVLGQSTEETPKKPEGASKKRKHQETEPA---PAEKTTKED 479
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.321 0.139 0.424
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,881,510
Number of Sequences: 37544
Number of extensions: 236437
Number of successful extensions: 432
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 416
Number of HSP's gapped (non-prelim): 16
length of query: 195
length of database: 14,793,348
effective HSP length: 78
effective length of query: 117
effective length of database: 11,864,916
effective search space: 1388195172
effective search space used: 1388195172
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 57 (27.1 bits)
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