Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002185-TA|BGIBMGA002185-PA|IPR002018|Carboxylesterase,
type B
(575 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 33 0.14
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 31 0.33
SPBP22H7.02c |||RNA-binding protein Mrd1 |Schizosaccharomyces po... 31 0.43
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 31 0.57
SPBC29B5.01 |atf1|mts1, sss1, gad7|transcription factor Atf1|Sch... 30 1.0
SPBC30D10.17c |||glucan synthase regulator |Schizosaccharomyces ... 29 1.3
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 29 1.3
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb... 29 2.3
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 28 4.1
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 28 4.1
SPAC227.06 |||Rab GTPase binding |Schizosaccharomyces pombe|chr ... 28 4.1
SPBC342.02 |||glutaminyl-tRNA synthetase |Schizosaccharomyces po... 27 9.4
SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|... 27 9.4
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 32.7 bits (71), Expect = 0.14
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 331 TPKTYSPAFKKTTDVIADTGLATKIPVL--NVLNITSSLNFNIVGMNSVTQSTASEVQKS 388
TP T S +T + + T L T IP+ +VLN ++ + + +N+ T T+S V S
Sbjct: 1258 TPITSSTVVNSSTPITSSTALNTSIPITSSSVLNSSTPIT-SSTALNTSTSITSSSVLNS 1316
Query: 389 ETTAAS 394
T S
Sbjct: 1317 STPITS 1322
Score = 32.3 bits (70), Expect = 0.19
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 331 TPKTYSPAFKKTTDVIADTGLATKIPVL--NVLNITSSLNFNIVGMNSVTQSTASEVQKS 388
TP T S +T + + TGL T P+ +VLN ++ + + V +NS T T+S +
Sbjct: 922 TPITSSSVLNSSTPITSSTGLNTSTPITSSSVLNSSTPITSSTV-LNSSTPITSSTALNT 980
Query: 389 ETTAAS 394
T S
Sbjct: 981 STPITS 986
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 31.5 bits (68), Expect = 0.33
Identities = 15/72 (20%), Positives = 33/72 (45%)
Query: 304 PDLHRPGGEDVPPAHHQLENEDNSIQPTPKTYSPAFKKTTDVIADTGLATKIPVLNVLNI 363
P H P + +PP H ++N + P+ + ++ + G+A++ P ++ N+
Sbjct: 128 PSNHLPAFQQIPPIHQSAYPQNNVAEVLMPPIPPSVEASSGQNFNQGIASQNPAISTSNL 187
Query: 364 TSSLNFNIVGMN 375
S+ I +N
Sbjct: 188 PSTTPLYIPPVN 199
>SPBP22H7.02c |||RNA-binding protein Mrd1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 833
Score = 31.1 bits (67), Expect = 0.43
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Query: 237 NFAKTGNPNEAQETDPIRAGRQERVRMKNIEWTAYEAVHKKYLNIDIK-SKLKNHYRAHR 295
+F ++G P AQ+ + + A E+V ++IE ++ K LN K + + ++
Sbjct: 584 SFKQSGKPELAQKVNAVEATTSEKVGTEDIESLDTATIYVKNLNFSTKQEEFQKVFKPLE 643
Query: 296 --LSFWLNLVPDLHRPG 310
LS + PD RPG
Sbjct: 644 GYLSAVIRAKPDPKRPG 660
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 30.7 bits (66), Expect = 0.57
Identities = 38/162 (23%), Positives = 65/162 (40%), Gaps = 7/162 (4%)
Query: 323 NEDNSIQPTPKTYSP-AFKKTTDVIADTGL-ATKIPVLNVLNITSSLNFNIVGMNSVTQS 380
NE N+ P S + TT + A+ G+ + I LN L TSS+ +SVT +
Sbjct: 810 NEYNTSFHAPTVSSTTSSSSTTSLAANKGVNSNSITSLN-LESTSSVTSTAYTTDSVTST 868
Query: 381 TASEVQKSETTAASPPEDGFAAYSTALSVTIAIGCSLLILNVLIFAGVYYQRDKTRMNGQ 440
TA Q ++ S + ST++ VT ++ ++ + V D +
Sbjct: 869 TALTSQGPSSSVVSSSLSSTTSLSTSIPVTSSVAPAVTSTGSETSSVVGSGTDSATSSSW 928
Query: 441 DGHNNGSHLKKRVENGQMPNNICGDLEGALSYQTSLKNDPAT 482
+ S + V P + A S+ +S + DP+T
Sbjct: 929 TAETSSSAITSSVAASVTPTS----SSSASSWSSSSEVDPST 966
>SPBC29B5.01 |atf1|mts1, sss1, gad7|transcription factor
Atf1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 566
Score = 29.9 bits (64), Expect = 1.0
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Query: 432 RDKTRMNGQDGHNNGSHLKKRVENGQMP--NNICGDLEGALSYQTS 475
R T +GQ+ N ++L ++ N MP N++ LE Y TS
Sbjct: 381 RQTTDFSGQNAENGSTNLPQKTSNSDMPTANSMPVKLENGTDYSTS 426
>SPBC30D10.17c |||glucan synthase regulator |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 504
Score = 29.5 bits (63), Expect = 1.3
Identities = 20/75 (26%), Positives = 33/75 (44%)
Query: 316 PAHHQLENEDNSIQPTPKTYSPAFKKTTDVIADTGLATKIPVLNVLNITSSLNFNIVGMN 375
P+ E S PTP A + + TGL +V N+ +S N + VG+N
Sbjct: 29 PSFRPSRREKQSRLPTPLQSVAASAYSGVNASQTGLLNDSRANSVTNLPNSSNTSQVGLN 88
Query: 376 SVTQSTASEVQKSET 390
+++ + V S+T
Sbjct: 89 NISPAPVGYVPGSKT 103
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 29.5 bits (63), Expect = 1.3
Identities = 20/90 (22%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Query: 316 PAHHQLENEDNSIQPTPKTYSPAFKKTTDVIADTGLATKIPVLNVLNITSSLNFNIVGMN 375
PA QL + + PT Y+P+ +++ ++ + +++ I + S + ++ +
Sbjct: 109 PATSQLPSSTSFFSPTSSEYTPSSTESSSLLDPSSVSSAILPSSTSVEVSISSSSLSSSD 168
Query: 376 SVTQSTASEVQKSETTAASPPEDGFAAYST 405
+T ST S + S +T++S P + ST
Sbjct: 169 PLTSSTFSSL--SSSTSSSQPSVSSTSSST 196
>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 28.7 bits (61), Expect = 2.3
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 327 SIQPTPKTYSPAFKKTTDVIAD--TGLATKIPVLNVLNITSSLNFNIVGMNSVTQSTASE 384
S+QP Y+ A +TT ++ + GL +P+ + +I S++ +G VT +
Sbjct: 140 SLQPVLALYASA--RTTGIVLECGDGLTHSVPIYDGFSIPSAIQQEEIGGRDVTDYLQLQ 197
Query: 385 VQKSETTAASPPE 397
++KS S E
Sbjct: 198 LRKSGHELVSSAE 210
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 27.9 bits (59), Expect = 4.1
Identities = 14/45 (31%), Positives = 20/45 (44%)
Query: 303 VPDLHRPGGEDVPPAHHQLENEDNSIQPTPKTYSPAFKKTTDVIA 347
+P++HRP + H+ N PT T SPA D +A
Sbjct: 39 LPNMHRPSRDSNSQTHNISFNIGTPTAPTVSTGSPAVASLHDQVA 83
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 27.9 bits (59), Expect = 4.1
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 5/40 (12%)
Query: 495 LPPPEFADLPGNNVAGMATLPRAPPPPKIGKTIN-TLASG 533
LPPP P ++ A +PPPPK+G+T + ASG
Sbjct: 907 LPPPP----PTASMTASAPAIASPPPPKVGETYHPPTASG 942
>SPAC227.06 |||Rab GTPase binding |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 27.9 bits (59), Expect = 4.1
Identities = 15/59 (25%), Positives = 27/59 (45%)
Query: 305 DLHRPGGEDVPPAHHQLENEDNSIQPTPKTYSPAFKKTTDVIADTGLATKIPVLNVLNI 363
DL++ P +L++ S+Q TP T +F T + + T IP +N ++
Sbjct: 22 DLYKQRTPITKPPAPRLQSRRASMQETPWTIKDSFNVETKDVVQRCIHTLIPTVNFFDV 80
>SPBC342.02 |||glutaminyl-tRNA synthetase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 811
Score = 26.6 bits (56), Expect = 9.4
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 523 IGKTINTLASGQLQENQPLLSAHQMQIMN--TSTLTKKNTQMNA 564
IG + TLA+ L++ P +AH+ I + S K N Q+NA
Sbjct: 53 IGNLLFTLANASLKQKDPKSNAHEAFIASKIVSGDLKTNLQVNA 96
>SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1184
Score = 26.6 bits (56), Expect = 9.4
Identities = 43/213 (20%), Positives = 71/213 (33%), Gaps = 3/213 (1%)
Query: 244 PNEAQETDPIRAGRQERVRMKNIEWTAYEAVHKKYLNIDIKSKLKNHYRAHRLSFWLNLV 303
PNE +E A Q R+R N+ +A A+ ++ D+ + + H F NL
Sbjct: 308 PNEVKERMDYEADAQRRIRKMNVFGSAGAALRER-TQQDLMANEQEH-SGEFAGFSRNLT 365
Query: 304 PDLHRPGG-EDVPPAHHQLENEDNSIQPTPKTYSPAFKKTTDVIADTGLATKIPVLNVLN 362
P E P + S TY P V + + V
Sbjct: 366 NTAAAPTTYEYKRPTSSYTAKDATSKVYRSNTYKPKSSVNGSVYRSKSVKSTTSHNKVPE 425
Query: 363 ITSSLNFNIVGMNSVTQSTASEVQKSETTAASPPEDGFAAYSTALSVTIAIGCSLLILNV 422
S +N M+S + A K+ + P D + A I G L + +
Sbjct: 426 RNSVPAYNEKLMHSSAANAAILSHKNYSPPVQPTRDDEVSQEDARVKEIVRGMKLPLTSS 485
Query: 423 LIFAGVYYQRDKTRMNGQDGHNNGSHLKKRVEN 455
+ A Y +K + H+ + +RV +
Sbjct: 486 SLSAAAYRPMEKQDPATVERHHIQAEATQRVRD 518
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.132 0.388
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,684,765
Number of Sequences: 5004
Number of extensions: 115887
Number of successful extensions: 298
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 287
Number of HSP's gapped (non-prelim): 17
length of query: 575
length of database: 2,362,478
effective HSP length: 77
effective length of query: 498
effective length of database: 1,977,170
effective search space: 984630660
effective search space used: 984630660
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 56 (26.6 bits)
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