Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002184-TA|BGIBMGA002184-PA|IPR000572|Oxidoreductase,
molybdopterin binding, IPR002018|Carboxylesterase, type B
         (74 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    31   0.001
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           31   0.001
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           30   0.003
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   0.30 
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    20   3.7  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    19   4.9  
AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    19   6.4  
AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    19   6.4  

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 31.1 bits (67), Expect = 0.001
 Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 5/74 (6%)

Query: 1   MSGSGLSPWSLVADPNKYAAIVATHANCSPDLTPPALLRCLRERPLEALLSAPVQAPDFA 60
           +SG+ L+ W+   +  + A  V     C P      ++RCLR RP  A++        F 
Sbjct: 234 ISGTALNCWTQTENSLEKAKQVGAFMGC-PTRNVKEMIRCLRYRPARAIVETLANFMRFY 292

Query: 61  Y----AFGPSVDGV 70
           Y     FGP  + V
Sbjct: 293 YNPFTPFGPVTEKV 306


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 31.1 bits (67), Expect = 0.001
 Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 5/74 (6%)

Query: 1   MSGSGLSPWSLVADPNKYAAIVATHANCSPDLTPPALLRCLRERPLEALLSAPVQAPDFA 60
           +SG+ L+ W+   +  + A  V     C P      ++RCLR RP  A++        F 
Sbjct: 234 ISGTALNCWTQTENSLEKAKQVGAFMGC-PTRNVKEMIRCLRYRPARAIVETLANFMRFY 292

Query: 61  Y----AFGPSVDGV 70
           Y     FGP  + V
Sbjct: 293 YNPFTPFGPVTEKV 306


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 29.9 bits (64), Expect = 0.003
 Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 1/61 (1%)

Query: 1   MSGSGLSPWSLVADPNKYAAIVATHANCSPDLTPPALLRCLRERPLEALLSAPVQAPDFA 60
           +SG+ L+ W+   +  + A  V     C P      ++RCLR RP  A++        F 
Sbjct: 105 ISGTALNCWTQTENSLEKAKQVGAFMGC-PTRNVKEMIRCLRYRPARAIVETLANFMRFY 163

Query: 61  Y 61
           Y
Sbjct: 164 Y 164


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.4 bits (48), Expect = 0.30
 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 3/54 (5%)

Query: 20  AIVATHANCSPDLT--PPALLRCLRERPLEALLSAPVQAPDFAYAFGPSVDGVV 71
           A +   A  +P+ T  PP L   L   P + L        DF+  F P++ GVV
Sbjct: 198 APILVRARETPNYTACPPTLACPLNPNP-QPLTGQQELLQDFSKRFSPAIRGVV 250


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 19.8 bits (39), Expect = 3.7
 Identities = 8/21 (38%), Positives = 12/21 (57%)

Query: 9   WSLVADPNKYAAIVATHANCS 29
           W  +AD   YA I+  +A+ S
Sbjct: 199 WVYIADVEGYALIIYNNADDS 219


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
          protein.
          Length = 500

 Score = 19.4 bits (38), Expect = 4.9
 Identities = 9/19 (47%), Positives = 10/19 (52%)

Query: 28 CSPDLTPPALLRCLRERPL 46
          CSPDL+      C  E PL
Sbjct: 36 CSPDLSVFTSPACGSETPL 54


>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding
          protein ASP1 protein.
          Length = 144

 Score = 19.0 bits (37), Expect = 6.4
 Identities = 9/27 (33%), Positives = 14/27 (51%), Gaps = 3/27 (11%)

Query: 20 AIVATHA---NCSPDLTPPALLRCLRE 43
          A++  HA   N +PD  PP +   + E
Sbjct: 14 ALLCLHAIFVNAAPDWVPPEVFDLVAE 40


>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
          protein ASP1 protein.
          Length = 144

 Score = 19.0 bits (37), Expect = 6.4
 Identities = 9/27 (33%), Positives = 14/27 (51%), Gaps = 3/27 (11%)

Query: 20 AIVATHA---NCSPDLTPPALLRCLRE 43
          A++  HA   N +PD  PP +   + E
Sbjct: 14 ALLCLHAIFVNAAPDWVPPEVFDLVAE 40


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.318    0.135    0.420 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,153
Number of Sequences: 429
Number of extensions: 862
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of query: 74
length of database: 140,377
effective HSP length: 46
effective length of query: 28
effective length of database: 120,643
effective search space:  3378004
effective search space used:  3378004
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)
S2: 36 (18.6 bits)