GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002184-TA|BGIBMGA002184-PA|IPR000572|Oxidoreductase,
molybdopterin binding, IPR002018|Carboxylesterase, type B
         (74 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    38   1e-05
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    36   3e-05
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    36   3e-05
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    36   5e-05
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    36   5e-05
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    25   0.084
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   0.34 
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    20   2.4  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    19   4.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    19   5.5  
AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.            19   5.5  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    19   5.5  

>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 37.5 bits (83), Expect = 1e-05
 Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 9/73 (12%)

Query: 1   MSGSGLSPWSLVADPNKYAAIVATHANCSPDLTPPALLRCLRERPLEAL-LSAP-VQA-- 56
           MSG+ L PW+L+  P      +AT   C  D T   ++RCL+ RP   + L+ P  QA  
Sbjct: 221 MSGTMLVPWALMEQPLAQTKKLATIVGCGTDET---MIRCLKSRPARQIALTVPRYQAWW 277

Query: 57  -PDFAYAFGPSVD 68
              FA  FGP +D
Sbjct: 278 YLPFA-QFGPVID 289


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 36.3 bits (80), Expect = 3e-05
 Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 9/73 (12%)

Query: 1   MSGSGLSPWSLVADPNKYAAIVATHANCSPDLTPPALLRCLRERPLEAL-LSAP-VQA-- 56
           MSG+ L PW+L+  P      +AT   C  D T   +++CL+ RP   + L+ P  QA  
Sbjct: 221 MSGTMLVPWALMEQPLAQTKKLATIVGCGTDET---MIKCLKSRPARQIALTVPRYQAWW 277

Query: 57  -PDFAYAFGPSVD 68
              FA  FGP +D
Sbjct: 278 YLPFA-QFGPVID 289


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 36.3 bits (80), Expect = 3e-05
 Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 9/73 (12%)

Query: 1   MSGSGLSPWSLVADPNKYAAIVATHANCSPDLTPPALLRCLRERPLEAL-LSAP-VQA-- 56
           MSG+ L PW+L+  P      +AT   C  D T   +++CL+ RP   + L+ P  QA  
Sbjct: 221 MSGTMLVPWALMEQPLAQTKKLATIVGCGTDET---MIKCLKSRPARQIALTVPRYQAWW 277

Query: 57  -PDFAYAFGPSVD 68
              FA  FGP +D
Sbjct: 278 YLPFA-QFGPVID 289


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 35.9 bits (79), Expect = 5e-05
 Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 9/73 (12%)

Query: 1   MSGSGLSPWSLVADPNKYAAIVATHANCSPDLTPPALLRCLRERPLEAL-LSAP-VQA-- 56
           MSG+ L PW+L+  P      +AT   C  D T   +++CL+ RP   + L+ P  QA  
Sbjct: 221 MSGTMLVPWALMEQPLAQTKKLATIVGCGTDGT---MIKCLKSRPARQIALTVPRYQAWW 277

Query: 57  -PDFAYAFGPSVD 68
              FA  FGP +D
Sbjct: 278 YLPFA-QFGPVID 289


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 35.9 bits (79), Expect = 5e-05
 Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 9/73 (12%)

Query: 1   MSGSGLSPWSLVADPNKYAAIVATHANCSPDLTPPALLRCLRERPLEAL-LSAP-VQA-- 56
           MSG+ L PW+L+  P      +AT   C  D T   +++CL+ RP   + L+ P  QA  
Sbjct: 221 MSGTMLVPWALMEQPLAQTKKLATIVGCGTDGT---MIKCLKSRPARQIALTVPRYQAWW 277

Query: 57  -PDFAYAFGPSVD 68
              FA  FGP +D
Sbjct: 278 YLPFA-QFGPVID 289


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 25.0 bits (52), Expect = 0.084
 Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 1/24 (4%)

Query: 22  VATHANCSPDLTPPALLRCLRERP 45
           +A  ANCSPDL    +L C +E P
Sbjct: 713 LARPANCSPDLY-AVMLNCWKECP 735


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 23.0 bits (47), Expect = 0.34
 Identities = 16/61 (26%), Positives = 25/61 (40%), Gaps = 6/61 (9%)

Query: 4   SGLSPWSLVADP------NKYAAIVATHANCSPDLTPPALLRCLRERPLEALLSAPVQAP 57
           +G+  WS+  D        KY  + A +A    D  PP  +     +P +   S P QA 
Sbjct: 356 AGVMIWSIETDDFNGLSGTKYQILNAINAALKSDEIPPEPVPTPEPQPTQTTESEPTQAS 415

Query: 58  D 58
           +
Sbjct: 416 E 416


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
          orthologue protein.
          Length = 431

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 8/29 (27%), Positives = 13/29 (44%)

Query: 2  SGSGLSPWSLVADPNKYAAIVATHANCSP 30
          S + +SP +     N  + +     NCSP
Sbjct: 16 SSNAMSPMTPTYSMNSMSCVSMPSMNCSP 44


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 19.4 bits (38), Expect = 4.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)

Query: 13  ADPNKYAAIVATHA 26
           AD N YA++VA  A
Sbjct: 102 ADQNGYASVVAAAA 115


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 9    WSLVADPNK 17
            W++V DPN+
Sbjct: 1691 WTVVQDPNR 1699


>AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.
          Length = 150

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 9/14 (64%), Positives = 10/14 (71%), Gaps = 1/14 (7%)

Query: 24 TH-ANCSPDLTPPA 36
          TH A+ SP  TPPA
Sbjct: 82 THGASISPQNTPPA 95


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
          ortholog protein.
          Length = 477

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 9/14 (64%), Positives = 10/14 (71%), Gaps = 1/14 (7%)

Query: 24 TH-ANCSPDLTPPA 36
          TH A+ SP  TPPA
Sbjct: 82 THGASISPQNTPPA 95


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.318    0.135    0.420 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,592
Number of Sequences: 317
Number of extensions: 697
Number of successful extensions: 17
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of query: 74
length of database: 114,650
effective HSP length: 45
effective length of query: 29
effective length of database: 100,385
effective search space:  2911165
effective search space used:  2911165
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (19.0 bits)
S2: 35 (18.2 bits)