GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002184-TA|BGIBMGA002184-PA|IPR000572|Oxidoreductase,
molybdopterin binding, IPR002018|Carboxylesterase, type B
         (74 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY330175-1|AAQ16281.1|  200|Anopheles gambiae odorant-binding pr...    21   4.4  
AJ618919-1|CAF01998.1|  200|Anopheles gambiae putative odorant-b...    21   4.4  
AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinestera...    21   4.4  
AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinestera...    21   4.4  
AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinestera...    21   4.4  
AF533512-1|AAM97673.1|  200|Anopheles gambiae odorant binding pr...    21   4.4  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    21   5.9  

>AY330175-1|AAQ16281.1|  200|Anopheles gambiae odorant-binding
          protein AgamOBP48 protein.
          Length = 200

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 12/21 (57%), Positives = 12/21 (57%)

Query: 48 ALLSAPVQAPDFAYAFGPSVD 68
          ALL A V A D   A GP VD
Sbjct: 20 ALLQAGVLAGDNPCAAGPPVD 40


>AJ618919-1|CAF01998.1|  200|Anopheles gambiae putative
          odorant-binding protein OBP3788 protein.
          Length = 200

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 12/21 (57%), Positives = 12/21 (57%)

Query: 48 ALLSAPVQAPDFAYAFGPSVD 68
          ALL A V A D   A GP VD
Sbjct: 20 ALLQAGVLAGDNPCAAGPPVD 40


>AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 4/75 (5%)

Query: 2   SGSGLSPWSLVA--DPNKYAAIVATHANCSPDLTPPA-LLRCLRERPLEALLSAPVQAPD 58
           SGS  +PW+LV+  +    A  +A    C  + +  +  + CLR +    L++       
Sbjct: 386 SGSPTAPWALVSREEATLRALRLAEAVGCPHEPSKLSDAVECLRGKDPHVLVNNEWGTLG 445

Query: 59  FA-YAFGPSVDGVVI 72
              + F P VDG  +
Sbjct: 446 ICEFPFVPVVDGAFL 460


>AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 4/75 (5%)

Query: 2   SGSGLSPWSLVA--DPNKYAAIVATHANCSPDLTPPA-LLRCLRERPLEALLSAPVQAPD 58
           SGS  +PW+LV+  +    A  +A    C  + +  +  + CLR +    L++       
Sbjct: 386 SGSPTAPWALVSREEATLRALRLAEAVGCPHEPSKLSDAVECLRGKDPHVLVNNEWGTLG 445

Query: 59  FA-YAFGPSVDGVVI 72
              + F P VDG  +
Sbjct: 446 ICEFPFVPVVDGAFL 460


>AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 623

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 4/75 (5%)

Query: 2   SGSGLSPWSLVA--DPNKYAAIVATHANCSPDLTPPA-LLRCLRERPLEALLSAPVQAPD 58
           SGS  +PW+LV+  +    A  +A    C  + +  +  + CLR +    L++       
Sbjct: 272 SGSPTAPWALVSREEATLRALRLAEAVGCPHEPSKLSDAVECLRGKDPHVLVNNEWGTLG 331

Query: 59  FA-YAFGPSVDGVVI 72
              + F P VDG  +
Sbjct: 332 ICEFPFVPVVDGAFL 346


>AF533512-1|AAM97673.1|  200|Anopheles gambiae odorant binding
          protein-8 protein.
          Length = 200

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 12/21 (57%), Positives = 12/21 (57%)

Query: 48 ALLSAPVQAPDFAYAFGPSVD 68
          ALL A V A D   A GP VD
Sbjct: 20 ALLQAGVLAGDNPCAAGPPVD 40


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 10/20 (50%), Positives = 11/20 (55%)

Query: 23  ATHANCSPDLTPPALLRCLR 42
           A HA  S  + PP L R LR
Sbjct: 557 AIHAALSKMMIPPYLCRLLR 576


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.318    0.135    0.420 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,258
Number of Sequences: 2123
Number of extensions: 2773
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of query: 74
length of database: 516,269
effective HSP length: 51
effective length of query: 23
effective length of database: 407,996
effective search space:  9383908
effective search space used:  9383908
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
S2: 40 (20.2 bits)