GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002183-TA|BGIBMGA002183-PA|undefined
         (238 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DA376B Cluster: PREDICTED: similar to Myosin hea...    36   1.2  
UniRef50_Q55VG4 Cluster: Putative uncharacterized protein; n=2; ...    34   3.6  
UniRef50_Q1GIK3 Cluster: Putative uncharacterized protein; n=1; ...    33   4.8  
UniRef50_Q7SC11 Cluster: Predicted protein; n=2; Neurospora cras...    33   4.8  
UniRef50_UPI0000DD8034 Cluster: PREDICTED: hypothetical protein;...    33   6.3  
UniRef50_A3LTG7 Cluster: Predicted protein; n=5; Saccharomycetac...    33   6.3  
UniRef50_Q7XQJ7 Cluster: OSJNBa0017B10.11 protein; n=11; Oryza s...    33   8.4  

>UniRef50_UPI0000DA376B Cluster: PREDICTED: similar to Myosin heavy
           chain, fast skeletal muscle, embryonic; n=1; Rattus
           norvegicus|Rep: PREDICTED: similar to Myosin heavy
           chain, fast skeletal muscle, embryonic - Rattus
           norvegicus
          Length = 399

 Score = 35.5 bits (78), Expect = 1.2
 Identities = 29/125 (23%), Positives = 50/125 (40%), Gaps = 6/125 (4%)

Query: 21  RKIIDRCLNVAYDIFKIKRIYTSSEQQ-----HSDRRSTEQYHPLGGR-SSLCRLIHSQT 74
           RK+ D C  +  +I  ++ I   SE++     H  R  TE+   L    S L R + +  
Sbjct: 54  RKLEDECSELKKEINDLETILAKSEKEKCAAEHKVRNLTEEVQSLHEDVSKLTRAVQAAQ 113

Query: 75  GDLRRNNRNLLIHHQRIKNFGYHNPRILADKSTSLTVVPQQASIAASTGPSQPTHRASWS 134
              ++   +L I  +++ N    N ++       L V  Q+A  A +    +  HR    
Sbjct: 114 EAQQQTQEHLHIEEEKLSNVSKVNQKLSQQVDAKLAVPSQEAVEARNASLERARHRLQLE 173

Query: 135 YGTQL 139
            G  L
Sbjct: 174 LGDAL 178


>UniRef50_Q55VG4 Cluster: Putative uncharacterized protein; n=2;
           Filobasidiella neoformans|Rep: Putative uncharacterized
           protein - Cryptococcus neoformans (Filobasidiella
           neoformans)
          Length = 432

 Score = 33.9 bits (74), Expect = 3.6
 Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 1/70 (1%)

Query: 107 TSLTVVPQQASIAASTGPSQPTHRASWSYGTQLHCLITPLQFIAAHDRIIKAWGNTSPAW 166
           +SLT     A++ +S+G S  T ++SW+  +      T  +  A +D      G T+P  
Sbjct: 22  SSLTSSQSTATVTSSSGVSSVT-QSSWTESSLKEDTQTTARIAAVNDTTFGTAGGTAPQS 80

Query: 167 QLCITWTTHN 176
               T TTHN
Sbjct: 81  DTTATTTTHN 90


>UniRef50_Q1GIK3 Cluster: Putative uncharacterized protein; n=1;
           Silicibacter sp. TM1040|Rep: Putative uncharacterized
           protein - Silicibacter sp. (strain TM1040)
          Length = 257

 Score = 33.5 bits (73), Expect = 4.8
 Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 8/80 (10%)

Query: 100 RILADKSTSLTVVPQQASIAASTGPSQPTHRASWSYGTQLHCLITPLQFIAAHDRIIKAW 159
           R+ AD +  L V PQ   ++      + +H     YG  + C++  +     H      W
Sbjct: 100 RLQADINEMLGVAPQSIKLSEIVNQMRQSHEEDGGYGEVVTCIVEEI-----HVDDSDFW 154

Query: 160 GNTSPAWQLCITWTTHNTHA 179
           G   P W++ +  TTH +H+
Sbjct: 155 G---PRWKVYLDDTTHYSHS 171


>UniRef50_Q7SC11 Cluster: Predicted protein; n=2; Neurospora
           crassa|Rep: Predicted protein - Neurospora crassa
          Length = 523

 Score = 33.5 bits (73), Expect = 4.8
 Identities = 28/99 (28%), Positives = 42/99 (42%), Gaps = 6/99 (6%)

Query: 46  QQHSDRRSTEQYHPLG-GRSSLCRLIHSQTGDLRRNNRNLLIHHQ-RIKNFGYHNPRILA 103
           Q   D  +  Q+H    G  S    +H Q G   R+ R+  +  +  + NFG  +     
Sbjct: 168 QYPHDPNAYYQHHDRSSGNLSPQDAVHPQNGSSNRDRRSASLGSRLSLSNFGSTSSNSSL 227

Query: 104 DKSTSLTVVPQQASIAASTGPSQPTHRASWSYGTQLHCL 142
            +S S+T +   +S A S GP+ P H    S     HCL
Sbjct: 228 GRS-SVTTMSTMSSAATSPGPASPHH---LSQSQHPHCL 262


>UniRef50_UPI0000DD8034 Cluster: PREDICTED: hypothetical protein;
           n=1; Homo sapiens|Rep: PREDICTED: hypothetical protein -
           Homo sapiens
          Length = 297

 Score = 33.1 bits (72), Expect = 6.3
 Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 4/68 (5%)

Query: 112 VPQQASIAASTGPSQPTHRA--SWSYGTQLHCLITPLQFIAAHDRIIKAWGNTSPAWQLC 169
           +PQQA +  + GPS P   A    ++ T+L CL  P+  +     +  A G ++P    C
Sbjct: 146 LPQQAHLPVANGPSTPDSPACSQQTFHTRLTCL-QPMD-LPHQTHLPAANGPSTPDLPAC 203

Query: 170 ITWTTHNT 177
             WT H +
Sbjct: 204 SQWTFHTS 211


>UniRef50_A3LTG7 Cluster: Predicted protein; n=5;
           Saccharomycetaceae|Rep: Predicted protein - Pichia
           stipitis (Yeast)
          Length = 348

 Score = 33.1 bits (72), Expect = 6.3
 Identities = 23/83 (27%), Positives = 34/83 (40%)

Query: 54  TEQYHPLGGRSSLCRLIHSQTGDLRRNNRNLLIHHQRIKNFGYHNPRILADKSTSLTVVP 113
           TE   P+   S+L R +H ++GD         +    I  F Y +     DKSTS T+  
Sbjct: 194 TEVLGPVESVSALTRQVHEESGDDDVLFSTFKLTSGAIGTFTYGSAFGATDKSTSFTIYG 253

Query: 114 QQASIAASTGPSQPTHRASWSYG 136
              SI     P+  T   ++  G
Sbjct: 254 TNGSIVYDWSPALKTPTITYQVG 276


>UniRef50_Q7XQJ7 Cluster: OSJNBa0017B10.11 protein; n=11; Oryza sativa
            (japonica cultivar-group)|Rep: OSJNBa0017B10.11 protein -
            Oryza sativa subsp. japonica (Rice)
          Length = 1814

 Score = 32.7 bits (71), Expect = 8.4
 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 1/33 (3%)

Query: 102  LADKSTSLTVVPQQASIA-ASTGPSQPTHRASW 133
            LAD     T  P+  S+  AS+GPSQP H A W
Sbjct: 1269 LADFVAEWTPAPEPVSVPEASSGPSQPPHTAHW 1301


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.323    0.131    0.412 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 233,452,675
Number of Sequences: 1657284
Number of extensions: 8739673
Number of successful extensions: 24158
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 24153
Number of HSP's gapped (non-prelim): 9
length of query: 238
length of database: 575,637,011
effective HSP length: 98
effective length of query: 140
effective length of database: 413,223,179
effective search space: 57851245060
effective search space used: 57851245060
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 71 (32.7 bits)