GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002183-TA|BGIBMGA002183-PA|undefined
         (238 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF247765-1|AAF86225.1| 1446|Drosophila melanogaster Toll-7 protein.    30   2.4  
AE013599-2957|AAF57514.1| 1446|Drosophila melanogaster CG8595-PA...    30   2.4  

>AF247765-1|AAF86225.1| 1446|Drosophila melanogaster Toll-7 protein.
          Length = 1446

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 3/43 (6%)

Query: 104 DKSTSLTVVPQQASIAASTG-PSQPTHRASWSY-GT-QLHCLI 143
           D S+ L+ VP  + + A+   PS P ++ SWSY GT  +HC +
Sbjct: 49  DYSSLLSNVPAASPVPANPSQPSGPANQCSWSYNGTSSVHCAL 91


>AE013599-2957|AAF57514.1| 1446|Drosophila melanogaster CG8595-PA
           protein.
          Length = 1446

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 3/43 (6%)

Query: 104 DKSTSLTVVPQQASIAASTG-PSQPTHRASWSY-GT-QLHCLI 143
           D S+ L+ VP  + + A+   PS P ++ SWSY GT  +HC +
Sbjct: 49  DYSSLLSNVPAASPVPANPSQPSGPANQCSWSYNGTSSVHCAL 91


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.323    0.131    0.412 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,590,701
Number of Sequences: 52641
Number of extensions: 433570
Number of successful extensions: 1533
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1533
Number of HSP's gapped (non-prelim): 2
length of query: 238
length of database: 24,830,863
effective HSP length: 83
effective length of query: 155
effective length of database: 20,461,660
effective search space: 3171557300
effective search space used: 3171557300
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 60 (28.3 bits)