Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002182-TA|BGIBMGA002182-PA|IPR002018|Carboxylesterase,
type B
(162 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0744 - 19867604-19867686,19868075-19869872,19870777-198708... 36 0.021
06_01_0289 - 2111768-2114377,2114970-2115025,2115272-2115323 27 5.5
05_03_0597 + 16014809-16015120,16015234-16015398,16015497-160159... 27 7.3
04_03_0781 + 19572795-19573540,19573906-19573956,19574179-195742... 27 7.3
10_08_0683 - 19860777-19861070,19861677-19861874,19862498-198626... 27 9.6
05_06_0214 - 26425100-26425922,26426008-26426058,26426183-264262... 27 9.6
04_04_0869 - 28883688-28884983 27 9.6
03_05_0988 - 29458789-29459776,29459875-29460035,29460134-294602... 27 9.6
>09_04_0744 -
19867604-19867686,19868075-19869872,19870777-19870801,
19872313-19872710
Length = 767
Score = 35.5 bits (78), Expect = 0.021
Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 6/114 (5%)
Query: 24 ATVEEKTSQQYISSRVVRTKYGDIRGFIVTPESRYLE-PV-EVFRGVPYASPPVGSLRFM 81
A+VEE + + V+T +I+ E L P+ + RG+P A +G L
Sbjct: 122 ASVEELNQRFLRKNNSVKTDVYKSTEYILEKEMEDLAGPILKRCRGLPLAISTIGGLLAN 181
Query: 82 PPVSGAQWSGVKIAEEFGPVCPQVLPDIRNETVVLKRISKGRLEYLKRILPFLT 135
P +G +W +K+ E G D+RN T V+ G YLK I +L+
Sbjct: 182 RPKTGIEW--IKLDEHLGAELES--SDLRNITKVIVSSYDGLPYYLKSIFLYLS 231
>06_01_0289 - 2111768-2114377,2114970-2115025,2115272-2115323
Length = 905
Score = 27.5 bits (58), Expect = 5.5
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 70 YASPPVGSLRFMPPVSGAQWSGVKIAEEFGPV 101
+A P G+LRF WSGV +++ G V
Sbjct: 64 FADPAGGALRFWQGQDCCAWSGVSCSKKIGSV 95
>05_03_0597 +
16014809-16015120,16015234-16015398,16015497-16015957,
16016057-16016233,16016331-16016679
Length = 487
Score = 27.1 bits (57), Expect = 7.3
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 4/63 (6%)
Query: 46 DIRGFIVTPESRYLEPVEVFRGVPYASPPVGSLRFMPPVSGAQWSGVKIAEEFGPVCPQV 105
D R I T E ++ V V RG P + PP SGA A + GP ++
Sbjct: 394 DTRAVITTYEGKHNHDVPVGRGGGGGRAPAPA----PPTSGAIRPSAVAAAQQGPYTLEM 449
Query: 106 LPD 108
LP+
Sbjct: 450 LPN 452
>04_03_0781 +
19572795-19573540,19573906-19573956,19574179-19574251,
19574772-19574876
Length = 324
Score = 27.1 bits (57), Expect = 7.3
Identities = 12/30 (40%), Positives = 14/30 (46%)
Query: 54 PESRYLEPVEVFRGVPYASPPVGSLRFMPP 83
P +L P G+P AS P LR PP
Sbjct: 153 PPGSFLRPGPAMPGIPQASIPTHMLRAAPP 182
>10_08_0683 -
19860777-19861070,19861677-19861874,19862498-19862659,
19862763-19862911,19863089-19863236,19863317-19863385,
19863471-19863719,19863937-19864131,19864444-19864560,
19864978-19866537
Length = 1046
Score = 26.6 bits (56), Expect = 9.6
Identities = 11/21 (52%), Positives = 11/21 (52%)
Query: 54 PESRYLEPVEVFRGVPYASPP 74
P S YL P F G P A PP
Sbjct: 39 PPSAYLSPSRSFHGYPSAPPP 59
>05_06_0214 -
26425100-26425922,26426008-26426058,26426183-26426256,
26426344-26426441,26426547-26426671,26426724-26426957,
26426992-26427037,26427101-26427152,26427331-26427367,
26427521-26427637,26428287-26428352,26428439-26428518,
26429102-26429311,26429650-26429739,26430093-26430182,
26430280-26430411,26430876-26431094,26431203-26431286,
26431543-26431656,26431857-26431914,26432535-26432602,
26432847-26432962,26433495-26433574,26433839-26433912
Length = 1045
Score = 26.6 bits (56), Expect = 9.6
Identities = 16/64 (25%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Query: 32 QQYISSRVVRTKYGDIRGFIV-TPESRYLEPVEVFRGVPYASPPVGSLRFMPPVSGAQWS 90
Q+ + V T Y IR P++ + P RG +P L P +G+ W
Sbjct: 445 QEVLGRSVNGTTYAGIRARTTGAPQNHWFGPAGDPRGAGIGTPEAIKLVCDPNFNGSNWI 504
Query: 91 GVKI 94
G+ +
Sbjct: 505 GIPV 508
>04_04_0869 - 28883688-28884983
Length = 431
Score = 26.6 bits (56), Expect = 9.6
Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Query: 37 SRVVRTKYGDIRGFIVTPESRYLEPVEVFRGVPYASPPVGSLRFMPPVSGA 87
SRV T D I T +S L P E+F G P +P G +P S A
Sbjct: 301 SRVASTVLDDTPTVIHTVDSVLLPP-ELFGGAPSPAPAPGPASDVPAASPA 350
>03_05_0988 -
29458789-29459776,29459875-29460035,29460134-29460271,
29460367-29460543
Length = 487
Score = 26.6 bits (56), Expect = 9.6
Identities = 9/34 (26%), Positives = 18/34 (52%)
Query: 63 EVFRGVPYASPPVGSLRFMPPVSGAQWSGVKIAE 96
E++ G +A PP G + + V+G G +++
Sbjct: 243 EIYAGTAFAEPPAGFVSALEVVAGRDGGGADVSD 276
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.323 0.141 0.419
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,629,805
Number of Sequences: 37544
Number of extensions: 184898
Number of successful extensions: 326
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 322
Number of HSP's gapped (non-prelim): 8
length of query: 162
length of database: 14,793,348
effective HSP length: 77
effective length of query: 85
effective length of database: 11,902,460
effective search space: 1011709100
effective search space used: 1011709100
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 56 (26.6 bits)
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