GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002182-TA|BGIBMGA002182-PA|IPR002018|Carboxylesterase,
type B
         (162 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    62   3e-12
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    62   3e-12
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    48   5e-08
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           48   5e-08
AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.        23   1.5  
AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex det...    21   8.0  
AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex det...    21   8.0  
AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex det...    21   8.0  
AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex det...    21   8.0  
AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex det...    21   8.0  

>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 62.1 bits (144), Expect = 3e-12
 Identities = 48/151 (31%), Positives = 70/151 (46%), Gaps = 26/151 (17%)

Query: 4   LMIVYFITLPVLTSKPVMGDATVEEKTSQQYISSRVVRTKYGDIRGFIVTPESRYLEPVE 63
           +++++F+ L   T +P  G+A    +    +    VV T  G +RGF   P +   + V 
Sbjct: 5   ILLLFFLLLSSCT-RPSRGNAVPSSQRGNVHNDPLVVETTSGLVRGF---PRTVLDKEVH 60

Query: 64  VFRGVPYASPPVGSLRFMPPVSGAQWSGVKIAEEFGPVCPQVLPDIRNETVVLKRISKGR 123
           VF G+P+A PP+G LRF  P+    W GV                  N TV+     + R
Sbjct: 61  VFYGIPFAKPPIGPLRFRKPLPIEPWHGV-----------------LNATVLPNSCYQER 103

Query: 124 LEYL-----KRILPFLTNQSEDCLYLNIYAP 149
            EY      + +    TN SEDCLYLNI+ P
Sbjct: 104 YEYFPGFPGEEMWNPNTNISEDCLYLNIWVP 134


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 62.1 bits (144), Expect = 3e-12
 Identities = 48/151 (31%), Positives = 70/151 (46%), Gaps = 26/151 (17%)

Query: 4   LMIVYFITLPVLTSKPVMGDATVEEKTSQQYISSRVVRTKYGDIRGFIVTPESRYLEPVE 63
           +++++F+ L   T +P  G+A    +    +    VV T  G +RGF   P +   + V 
Sbjct: 5   ILLLFFLLLSSCT-RPSRGNAVPSSQRGNVHNDPLVVETTSGLVRGF---PRTVLDKEVH 60

Query: 64  VFRGVPYASPPVGSLRFMPPVSGAQWSGVKIAEEFGPVCPQVLPDIRNETVVLKRISKGR 123
           VF G+P+A PP+G LRF  P+    W GV                  N TV+     + R
Sbjct: 61  VFYGIPFAKPPIGPLRFRKPLPIEPWHGV-----------------LNATVLPNSCYQER 103

Query: 124 LEYL-----KRILPFLTNQSEDCLYLNIYAP 149
            EY      + +    TN SEDCLYLNI+ P
Sbjct: 104 YEYFPGFPGEEMWNPNTNISEDCLYLNIWVP 134


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 48.0 bits (109), Expect = 5e-08
 Identities = 36/111 (32%), Positives = 49/111 (44%), Gaps = 21/111 (18%)

Query: 40  VRTKYGDIRGFIVTPESRYLEPVEVFRGVPYASPPVGSLRFMPPVSGAQWSGVKIAEEFG 99
           V+T  G I+G+     +   +  E + G+PYA PPVG  RF  P     W G   A +FG
Sbjct: 25  VKTPLGAIKGYYKISGNG--KQYEAYEGIPYALPPVGKFRFKAPQKIPAWIGELSATKFG 82

Query: 100 PVCPQVLPDIRNETVVLKRISKGRLEYLKRILPFLTNQSEDCLYLNIYAPA 150
             C Q           L    + ++E            +EDCLYLN+Y PA
Sbjct: 83  FPCLQY--------TQLPVNPRDKIE-----------GAEDCLYLNVYVPA 114


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 48.0 bits (109), Expect = 5e-08
 Identities = 36/111 (32%), Positives = 49/111 (44%), Gaps = 21/111 (18%)

Query: 40  VRTKYGDIRGFIVTPESRYLEPVEVFRGVPYASPPVGSLRFMPPVSGAQWSGVKIAEEFG 99
           V+T  G I+G+     +   +  E + G+PYA PPVG  RF  P     W G   A +FG
Sbjct: 25  VKTPLGAIKGYYKISGNG--KQYEAYEGIPYALPPVGKFRFKAPQKIPAWIGELSATKFG 82

Query: 100 PVCPQVLPDIRNETVVLKRISKGRLEYLKRILPFLTNQSEDCLYLNIYAPA 150
             C Q           L    + ++E            +EDCLYLN+Y PA
Sbjct: 83  FPCLQY--------TQLPVNPRDKIE-----------GAEDCLYLNVYVPA 114


>AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.
          Length = 62

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 7/10 (70%), Positives = 10/10 (100%)

Query: 138 SEDCLYLNIY 147
           +EDCLYL++Y
Sbjct: 1   TEDCLYLDVY 10


>AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 7/14 (50%), Positives = 8/14 (57%)

Query: 70  YASPPVGSLRFMPP 83
           Y  PP    RF+PP
Sbjct: 377 YIGPPTSFPRFIPP 390


>AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 7/14 (50%), Positives = 8/14 (57%)

Query: 70  YASPPVGSLRFMPP 83
           Y  PP    RF+PP
Sbjct: 377 YIGPPTSFPRFIPP 390


>AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 7/14 (50%), Positives = 8/14 (57%)

Query: 70  YASPPVGSLRFMPP 83
           Y  PP    RF+PP
Sbjct: 377 YIGPPTSFPRFIPP 390


>AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 7/14 (50%), Positives = 8/14 (57%)

Query: 70  YASPPVGSLRFMPP 83
           Y  PP    RF+PP
Sbjct: 377 YIGPPTSFPRFIPP 390


>AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 7/14 (50%), Positives = 8/14 (57%)

Query: 70  YASPPVGSLRFMPP 83
           Y  PP    RF+PP
Sbjct: 366 YIGPPTSFPRFIPP 379


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.323    0.141    0.419 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,187
Number of Sequences: 429
Number of extensions: 1855
Number of successful extensions: 16
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of query: 162
length of database: 140,377
effective HSP length: 53
effective length of query: 109
effective length of database: 117,640
effective search space: 12822760
effective search space used: 12822760
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 41 (20.6 bits)