GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002181-TA|BGIBMGA002181-PA|undefined
         (81 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   1.3  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    20   2.9  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    19   6.7  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    19   8.8  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol
          oxidase subunit 1 protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 1.3
 Identities = 7/14 (50%), Positives = 11/14 (78%)

Query: 44 LFNLDKNYNPERYK 57
          +F++  N+ PERYK
Sbjct: 27 VFDVPNNFLPERYK 40


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription
          factor homolog protein.
          Length = 276

 Score = 20.2 bits (40), Expect = 2.9
 Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 4/49 (8%)

Query: 8  SPCDKCEGPTLDRSTSSINVYPESVDPVEAVTVYCLLFNLDKNYNPERY 56
          +P DK    T    TSS+NV  +++           L  L+K +  E Y
Sbjct: 51 TPSDKLNTST----TSSVNVNDQNIRRYRTAFTREQLARLEKEFFKENY 95


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 19.0 bits (37), Expect = 6.7
 Identities = 9/27 (33%), Positives = 16/27 (59%)

Query: 41  YCLLFNLDKNYNPERYKKNVKLNFLSV 67
           Y L+F++ K Y  ++  KN + +  SV
Sbjct: 353 YTLVFSVLKQYVMQQQVKNFRHSVRSV 379


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 18.6 bits (36), Expect = 8.8
 Identities = 7/13 (53%), Positives = 8/13 (61%)

Query: 44  LFNLDKNYNPERY 56
           L N + NYNP  Y
Sbjct: 275 LSNSNTNYNPGTY 287


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.315    0.131    0.396 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,418
Number of Sequences: 317
Number of extensions: 736
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 81
length of database: 114,650
effective HSP length: 46
effective length of query: 35
effective length of database: 100,068
effective search space:  3502380
effective search space used:  3502380
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.3 bits)
S2: 36 (18.6 bits)