Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002181-TA|BGIBMGA002181-PA|undefined
(81 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY582423-1|AAT12221.1| 97|Homo sapiens immunoglobulin heavy ch... 30 1.3
BC016445-1|AAH16445.1| 617|Homo sapiens vacuolar protein sortin... 29 3.1
AL357472-1|CAB93109.1| 528|Homo sapiens VPS33B protein. 29 3.1
AK027754-1|BAB55345.1| 617|Homo sapiens protein ( Homo sapiens ... 29 3.1
AF308803-1|AAG34680.1| 617|Homo sapiens vacuolar protein sortin... 29 3.1
AF201694-1|AAF91174.1| 617|Homo sapiens vacuolar protein sortin... 29 3.1
U61375-1|AAC50690.1| 226|Homo sapiens ETV6 protein. 27 7.2
U11732-1|AAA19786.1| 452|Homo sapiens tel protein. 27 7.2
DQ841178-1|ABI30005.1| 556|Homo sapiens B-cell lineage specific... 27 7.2
BC043399-1|AAH43399.1| 452|Homo sapiens ets variant gene 6 (TEL... 27 7.2
BC037207-1|AAH37207.1| 738|Homo sapiens KIAA1600 protein protein. 27 7.2
AL137025-4|CAH70000.1| 738|Homo sapiens novel protein protein. 27 7.2
AL137025-3|CAH69999.1| 765|Homo sapiens novel protein protein. 27 7.2
AB067190-1|BAC02228.1| 131|Homo sapiens immunoglobulin heavy ch... 27 7.2
AB046820-1|BAB13426.2| 741|Homo sapiens KIAA1600 protein protein. 27 7.2
AJ289308-1|CAB93212.1| 115|Homo sapiens immunoglobulin heavy ch... 27 9.5
>AY582423-1|AAT12221.1| 97|Homo sapiens immunoglobulin heavy
chain variable region protein.
Length = 97
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 17 TLDRSTSSINVYPESVDPVEAVTVYCLLFNLDKNYN 52
T D S + + + ++DPV+ T YC FN D YN
Sbjct: 54 TKDTSKNQVVLTMTNMDPVDTATYYCARFNRD-GYN 88
>BC016445-1|AAH16445.1| 617|Homo sapiens vacuolar protein sorting
33 homolog B (yeast) protein.
Length = 617
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 14 EGPTLDRSTSSINVYPE-SVDPVEAVTVYCLLFNLDKNYNPERYKKNVKLNFLSVNGNE 71
EG + STS I + + V P+E++ + CLL + P+ Y +++K +L G E
Sbjct: 372 EGFNIRESTSYIEEHIDRQVSPIESLRLMCLLSITENGLIPKDY-RSLKTQYLQSYGPE 429
>AL357472-1|CAB93109.1| 528|Homo sapiens VPS33B protein.
Length = 528
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 14 EGPTLDRSTSSINVYPE-SVDPVEAVTVYCLLFNLDKNYNPERYKKNVKLNFLSVNGNE 71
EG + STS I + + V P+E++ + CLL + P+ Y +++K +L G E
Sbjct: 283 EGFNIRESTSYIEEHIDRQVSPIESLRLMCLLSITENGLIPKDY-RSLKTQYLQSYGPE 340
>AK027754-1|BAB55345.1| 617|Homo sapiens protein ( Homo sapiens
cDNA FLJ14848 fis, clone PLACE1000492, highly similar to
Rat vacuolar protein sorting homolog r-vps33b mRNA. ).
Length = 617
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 14 EGPTLDRSTSSINVYPE-SVDPVEAVTVYCLLFNLDKNYNPERYKKNVKLNFLSVNGNE 71
EG + STS I + + V P+E++ + CLL + P+ Y +++K +L G E
Sbjct: 372 EGFNIRESTSYIEEHIDRQVSPIESLRLMCLLSITENGLIPKDY-RSLKTQYLQSYGPE 429
>AF308803-1|AAG34680.1| 617|Homo sapiens vacuolar protein sorting
protein 33B protein.
Length = 617
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 14 EGPTLDRSTSSINVYPE-SVDPVEAVTVYCLLFNLDKNYNPERYKKNVKLNFLSVNGNE 71
EG + STS I + + V P+E++ + CLL + P+ Y +++K +L G E
Sbjct: 372 EGFNIRESTSYIEEHIDRQVSPIESLRLMCLLSITENGLIPKDY-RSLKTQYLQSYGPE 429
>AF201694-1|AAF91174.1| 617|Homo sapiens vacuolar protein sorting
33B protein.
Length = 617
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 14 EGPTLDRSTSSINVYPE-SVDPVEAVTVYCLLFNLDKNYNPERYKKNVKLNFLSVNGNE 71
EG + STS I + + V P+E++ + CLL + P+ Y +++K +L G E
Sbjct: 372 EGFNIRESTSYIEEHIDRQVSPIESLRLMCLLSITENGLIPKDY-RSLKTQYLQSYGPE 429
>U61375-1|AAC50690.1| 226|Homo sapiens ETV6 protein.
Length = 226
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 2 NRQRHSSPCDKCEGPTLDRSTSSINVYPESVDPVE 36
N R SP ++ +GP + + YP SV P+E
Sbjct: 97 NMIRRLSPAERAQGPRPHQENNHQESYPLSVSPME 131
>U11732-1|AAA19786.1| 452|Homo sapiens tel protein.
Length = 452
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 2 NRQRHSSPCDKCEGPTLDRSTSSINVYPESVDPVE 36
N R SP ++ +GP + + YP SV P+E
Sbjct: 207 NMIRRLSPAERAQGPRPHQENNHQESYPLSVSPME 241
>DQ841178-1|ABI30005.1| 556|Homo sapiens B-cell lineage specific
activator/TEL oncogene fusion protein protein.
Length = 556
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 2 NRQRHSSPCDKCEGPTLDRSTSSINVYPESVDPVE 36
N R SP ++ +GP + + YP SV P+E
Sbjct: 311 NMIRRLSPAERAQGPRPHQENNHQESYPLSVSPME 345
>BC043399-1|AAH43399.1| 452|Homo sapiens ets variant gene 6 (TEL
oncogene) protein.
Length = 452
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 2 NRQRHSSPCDKCEGPTLDRSTSSINVYPESVDPVE 36
N R SP ++ +GP + + YP SV P+E
Sbjct: 207 NMIRRLSPAERAQGPRPHQENNHQESYPLSVSPME 241
>BC037207-1|AAH37207.1| 738|Homo sapiens KIAA1600 protein protein.
Length = 738
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 13 CEGPTLDRSTSSINVYPESVDPVEAVTVYCLLFNLDKNYNPE 54
CE T DR S P+SVDP++ TV + + LD + E
Sbjct: 306 CELLT-DRLASLYKALPQSVDPLDIETVEAINWGLDSYSHKE 346
>AL137025-4|CAH70000.1| 738|Homo sapiens novel protein protein.
Length = 738
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 13 CEGPTLDRSTSSINVYPESVDPVEAVTVYCLLFNLDKNYNPE 54
CE T DR S P+SVDP++ TV + + LD + E
Sbjct: 306 CELLT-DRLASLYKALPQSVDPLDIETVEAINWGLDSYSHKE 346
>AL137025-3|CAH69999.1| 765|Homo sapiens novel protein protein.
Length = 765
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 13 CEGPTLDRSTSSINVYPESVDPVEAVTVYCLLFNLDKNYNPE 54
CE T DR S P+SVDP++ TV + + LD + E
Sbjct: 306 CELLT-DRLASLYKALPQSVDPLDIETVEAINWGLDSYSHKE 346
>AB067190-1|BAC02228.1| 131|Homo sapiens immunoglobulin heavy chain
VHDJ region protein.
Length = 131
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 19 DRSTSSINVYPESVDPVEAVTVYCLLFN 46
D S S + + ++DPV+ T YC L N
Sbjct: 74 DTSKSQVVLTMTNMDPVDTATYYCALLN 101
>AB046820-1|BAB13426.2| 741|Homo sapiens KIAA1600 protein protein.
Length = 741
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 13 CEGPTLDRSTSSINVYPESVDPVEAVTVYCLLFNLDKNYNPE 54
CE T DR S P+SVDP++ TV + + LD + E
Sbjct: 282 CELLT-DRLASLYKALPQSVDPLDIETVEAINWGLDSYSHKE 322
>AJ289308-1|CAB93212.1| 115|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 115
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 19 DRSTSSINVYPESVDPVEAVTVYCLLFNLDKNYNP 53
D S + + + ++DPV+ T YC + D YNP
Sbjct: 68 DTSKNQVVLTMTNMDPVDTATYYCARISRD-GYNP 101
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.315 0.131 0.396
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,962,307
Number of Sequences: 224733
Number of extensions: 390723
Number of successful extensions: 1337
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1327
Number of HSP's gapped (non-prelim): 16
length of query: 81
length of database: 73,234,838
effective HSP length: 59
effective length of query: 22
effective length of database: 59,975,591
effective search space: 1319463002
effective search space used: 1319463002
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 57 (27.1 bits)
- SilkBase 1999-2023 -