Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002180-TA|BGIBMGA002180-PA|IPR002018|Carboxylesterase,
type B
(982 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g02410.1 68416.m00228 hypothetical protein weak similarity to... 39 0.014
At5g15860.2 68418.m01856 expressed protein 36 0.10
At5g15860.1 68418.m01855 expressed protein 36 0.10
At1g26120.1 68414.m03188 esterase-related contains similaity to ... 32 1.6
At5g23530.1 68418.m02761 expressed protein contains similarity t... 31 5.0
At2g40860.1 68415.m05044 protein kinase family protein / protein... 31 5.0
At1g17690.1 68414.m02190 expressed protein 31 5.0
At5g06570.2 68418.m00742 expressed protein similar to PrMC3 [Pin... 30 6.6
At5g06570.1 68418.m00741 expressed protein similar to PrMC3 [Pin... 30 6.6
At1g55600.1 68414.m06364 WRKY family transcription factor simila... 30 6.6
At3g58860.1 68416.m06560 F-box family protein contains F-box dom... 30 8.7
At2g45040.1 68415.m05607 matrix metalloproteinase nearly identic... 30 8.7
>At3g02410.1 68416.m00228 hypothetical protein weak similarity to
kynurenine formamidase [Mus musculus] GI:21552719
Length = 422
Score = 39.1 bits (87), Expect = 0.014
Identities = 27/74 (36%), Positives = 35/74 (47%), Gaps = 9/74 (12%)
Query: 266 DQIAALHWVQQNIALFGGDPNNITLMGHGSGAACINFLMISPTVMPGLFHRAILLSGSAL 325
D + +V NI+ FGGDPN I LMG +GA IS LF +AI S
Sbjct: 202 DAAQGISFVCNNISAFGGDPNRIYLMGQSAGA------HISSC---ALFEQAIKESRGES 252
Query: 326 SSWAIVDDPVYYSL 339
SW++ Y+ L
Sbjct: 253 ISWSVSQIKAYFGL 266
>At5g15860.2 68418.m01856 expressed protein
Length = 299
Score = 36.3 bits (80), Expect = 0.10
Identities = 16/32 (50%), Positives = 20/32 (62%)
Query: 266 DQIAALHWVQQNIALFGGDPNNITLMGHGSGA 297
D + +V NI+ FGGDPN I LMG +GA
Sbjct: 207 DASQGISFVCNNISAFGGDPNRIYLMGQSAGA 238
>At5g15860.1 68418.m01855 expressed protein
Length = 427
Score = 36.3 bits (80), Expect = 0.10
Identities = 16/32 (50%), Positives = 20/32 (62%)
Query: 266 DQIAALHWVQQNIALFGGDPNNITLMGHGSGA 297
D + +V NI+ FGGDPN I LMG +GA
Sbjct: 207 DASQGISFVCNNISAFGGDPNRIYLMGQSAGA 238
>At1g26120.1 68414.m03188 esterase-related contains similaity to
esterase 6 GI:606998 from [Drosophila simulans] and
esterase GI:12584120 from [Sphingomonas elodea]
Length = 476
Score = 32.3 bits (70), Expect = 1.6
Identities = 14/32 (43%), Positives = 21/32 (65%)
Query: 266 DQIAALHWVQQNIALFGGDPNNITLMGHGSGA 297
D + + +V +IA +GGDP+ I LMG +GA
Sbjct: 258 DASSGISFVCNHIAEYGGDPDRIYLMGQSAGA 289
>At5g23530.1 68418.m02761 expressed protein contains similarity to
PrMC3 [Pinus radiata] GI:5487873
Length = 335
Score = 30.7 bits (66), Expect = 5.0
Identities = 19/70 (27%), Positives = 39/70 (55%), Gaps = 8/70 (11%)
Query: 176 YLKNQSEDCLYLNIFAPLQMDETKLELPVLVYIHGESYSWSS--SHPYDGAV--LASYTD 231
++ +QS D L+ ++ P + ++PV+V+ HG +++ S ++PYD A
Sbjct: 65 FVVDQSRD-LWFRLYTPHVSGD---KIPVVVFFHGGGFAFLSPNAYPYDNVCRRFARKLP 120
Query: 232 LIVVTLNFRL 241
V+++N+RL
Sbjct: 121 AYVISVNYRL 130
>At2g40860.1 68415.m05044 protein kinase family protein / protein
phosphatase 2C ( PP2C) family protein contains Pfam
PF00481: Protein phosphatase 2C domain; contains Pfam
PF00069: Protein kinase domain; similar to partner of
PIX 1 (GI:21702695) [Homo sapiens]
Length = 658
Score = 30.7 bits (66), Expect = 5.0
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 319 LLSGSALSSWAIVDDPVYYSLKLA-KHMNCTVPEDLSKDHEVI-VDC-LREASIRDLLAA 375
LLS A S ++V + + ++A K + +DL K H + + C L + LLAA
Sbjct: 32 LLSPIAKGSESVVYEAILDGRRVAAKKPILSTSDDLDKFHRNLQLSCNLNHPGVAKLLAA 91
Query: 376 DISPPNYLTAF 386
PPNY+ F
Sbjct: 92 HAKPPNYMFFF 102
>At1g17690.1 68414.m02190 expressed protein
Length = 754
Score = 30.7 bits (66), Expect = 5.0
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Query: 7 SDENYDDHDREHDPVDYAKVNFDHNPFFNSEDFLQKFYNSDNSAYSNYDDYKKYYLNPSN 66
+ E+ D+ E DP DY H N + F+ +S SA+S + + K
Sbjct: 139 TQEDNDNQSEEEDPDDYETDEEVHELSTNGQSFVDA--SSSISAFSEHLSH-KLSSEEVE 195
Query: 67 PIPKSKVKFKISS 79
+PK K KFK S
Sbjct: 196 TLPKGKWKFKWES 208
>At5g06570.2 68418.m00742 expressed protein similar to PrMC3 [Pinus
radiata] GI:5487873
Length = 329
Score = 30.3 bits (65), Expect = 6.6
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 185 LYLNIFAPLQMDETKLELPVLVYIHGESY-----SWSSSHPYDGAVLASYTDLIVVTLNF 239
L+L ++ P+ + LPV+V+ HG + SW H + LAS + +VV+ ++
Sbjct: 60 LHLRLYKPISASN-RTALPVVVFFHGGGFCFGSRSWPHFHNF-CLTLASSLNALVVSPDY 117
Query: 240 RL 241
RL
Sbjct: 118 RL 119
>At5g06570.1 68418.m00741 expressed protein similar to PrMC3 [Pinus
radiata] GI:5487873
Length = 329
Score = 30.3 bits (65), Expect = 6.6
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 185 LYLNIFAPLQMDETKLELPVLVYIHGESY-----SWSSSHPYDGAVLASYTDLIVVTLNF 239
L+L ++ P+ + LPV+V+ HG + SW H + LAS + +VV+ ++
Sbjct: 60 LHLRLYKPISASN-RTALPVVVFFHGGGFCFGSRSWPHFHNF-CLTLASSLNALVVSPDY 117
Query: 240 RL 241
RL
Sbjct: 118 RL 119
>At1g55600.1 68414.m06364 WRKY family transcription factor similar
to SPF1 protein GI:484261 from [Ipomoea batatas];
contains Pfam profile: PF03106 WRKY DNA -binding domain
Length = 485
Score = 30.3 bits (65), Expect = 6.6
Identities = 25/97 (25%), Positives = 47/97 (48%), Gaps = 13/97 (13%)
Query: 1 MQNDQPSDENYDDHDREHDPVDYAKVNFDHNPFFNSEDFLQKFYNSDNSAYSNYDDYKKY 60
+++ + D N DD D + D + +D + + ++ +K + DN A DD
Sbjct: 217 IEDSESEDGNKDDDDEDFQYEDEDEDQYDQDQDVDEDEEEEK--DEDNVAL---DD---- 267
Query: 61 YLNPSNPIPKSKVKFKISSRIVQTKYGKLQGIVLAMD 97
P P PK + ++++S+ I T+ K Q I+L M+
Sbjct: 268 ---PQPPPPKRR-RYEVSNMIGATRTSKTQRIILQME 300
>At3g58860.1 68416.m06560 F-box family protein contains F-box domain
Pfam:PF00646
Length = 457
Score = 29.9 bits (64), Expect = 8.7
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 429 KKRSDSGRRLFQNKYDLLFGVVTSEALWKFSAGDVQNGIEPDKRDRMLRTYVRNSYTYHL 488
K+ D R F + D + + + + KFS +V+ G++PD+ DR + ++ + HL
Sbjct: 63 KREKDGILRSFMDFVDRVLALQGASPIKKFSL-NVKTGVDPDRVDRWICNVLQRGVS-HL 120
Query: 489 SEIFYTIVNEYT 500
+ +F EY+
Sbjct: 121 A-LFMDFEEEYS 131
>At2g45040.1 68415.m05607 matrix metalloproteinase nearly identical
to metalloproteinase [Arabidopsis thaliana] GI:3128477;
contains InterPro accession IPR001818: Matrixin
Length = 342
Score = 29.9 bits (64), Expect = 8.7
Identities = 12/45 (26%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 594 FGHFPQNYTKSELALSESIMMFLANFAK--TGDPNDNTRQEALLP 636
+G+ PQN +++ ++++ + N TG P+ +T + LLP
Sbjct: 60 YGYLPQNKESDDVSFEQALVRYQKNLGLPITGKPDSDTLSQILLP 104
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.317 0.135 0.408
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,971,257
Number of Sequences: 28952
Number of extensions: 1159241
Number of successful extensions: 2721
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 2717
Number of HSP's gapped (non-prelim): 12
length of query: 982
length of database: 12,070,560
effective HSP length: 88
effective length of query: 894
effective length of database: 9,522,784
effective search space: 8513368896
effective search space used: 8513368896
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 64 (29.9 bits)
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