GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002179-TA|BGIBMGA002179-PA|undefined
         (57 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6FP34 Cluster: Candida glabrata strain CBS138 chromoso...    31   3.4  
UniRef50_Q4WW36 Cluster: C6 transcription factor, putative; n=2;...    30   7.9  

>UniRef50_Q6FP34 Cluster: Candida glabrata strain CBS138
          chromosome J complete sequence; n=1; Candida
          glabrata|Rep: Candida glabrata strain CBS138 chromosome
          J complete sequence - Candida glabrata (Yeast)
          (Torulopsis glabrata)
          Length = 1105

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 14/27 (51%), Positives = 16/27 (59%)

Query: 11 YNVNRSEADWRLEHTEMSKPGRLSNYL 37
          YN  R E D +LEH E +KP    NYL
Sbjct: 18 YNDQRLEKDKKLEHIERNKPTEQKNYL 44


>UniRef50_Q4WW36 Cluster: C6 transcription factor, putative; n=2;
           Trichocomaceae|Rep: C6 transcription factor, putative -
           Aspergillus fumigatus (Sartorya fumigata)
          Length = 787

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 2/54 (3%)

Query: 2   KGKGYNSL-TYNVNRSEADWRLEHTEMSKP-GRLSNYLRLVRTRTVFSLCTVRL 53
           KG+ Y S  T  +NR+  DW ++H  +  P   ++       T   ++LCT+R+
Sbjct: 488 KGREYISRQTQQINRTLDDWEIQHKHILSPASTMTAQEAFCLTELRYTLCTLRV 541


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.320    0.130    0.385 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,182,603
Number of Sequences: 1657284
Number of extensions: 1412072
Number of successful extensions: 2854
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2853
Number of HSP's gapped (non-prelim): 2
length of query: 57
length of database: 575,637,011
effective HSP length: 37
effective length of query: 20
effective length of database: 514,317,503
effective search space: 10286350060
effective search space used: 10286350060
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 65 (30.3 bits)