GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002179-TA|BGIBMGA002179-PA|undefined
         (57 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            21   4.4  
AY745216-1|AAU93483.1|   89|Anopheles gambiae cytochrome P450 pr...    21   4.4  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    20   7.6  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 10/34 (29%), Positives = 18/34 (52%)

Query: 11   YNVNRSEADWRLEHTEMSKPGRLSNYLRLVRTRT 44
            Y  +R + D ++ HT+M +  +   Y RL   +T
Sbjct: 3247 YIFSRPKRDQQVSHTDMVEYEKKMLYCRLDEMKT 3280


>AY745216-1|AAU93483.1|   89|Anopheles gambiae cytochrome P450
          protein.
          Length = 89

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 8/12 (66%), Positives = 8/12 (66%)

Query: 11 YNVNRSEADWRL 22
          YNV RSE  W L
Sbjct: 15 YNVQRSEQHWGL 26


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 9/14 (64%), Positives = 9/14 (64%)

Query: 22  LEHTEMSKPGRLSN 35
           LEH E S PG  SN
Sbjct: 223 LEHMEPSGPGYSSN 236


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.320    0.130    0.385 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,388
Number of Sequences: 2123
Number of extensions: 1331
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 57
length of database: 516,269
effective HSP length: 36
effective length of query: 21
effective length of database: 439,841
effective search space:  9236661
effective search space used:  9236661
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.4 bits)
S2: 40 (20.2 bits)