Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002179-TA|BGIBMGA002179-PA|undefined
(57 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 20 2.1
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 20 2.7
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 20 2.7
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 19 3.6
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 19 3.6
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 19 3.6
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 19 3.6
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 19 3.6
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 19 3.6
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 19 3.6
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 19 3.6
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 19 3.6
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 19 3.6
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 19 3.6
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 19 3.6
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 19 4.7
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 19 6.3
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 19 6.3
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 18 8.3
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 18 8.3
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 18 8.3
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 20.2 bits (40), Expect = 2.1
Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Query: 7 NSLTYNVNRSEADWRLEHTEMSKPGRLSNYLRLVRTRTVFSLCTVRL 53
N + + + S+ W+L H + P L Y R +VF+L L
Sbjct: 290 NLICHILCMSDLHWQLPHNSTNPPNILL-YYRDSLALSVFALILTAL 335
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 19.8 bits (39), Expect = 2.7
Identities = 10/36 (27%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 15 RSEADWRLEHTEMSKPGRLSN-YLRLVRTRTVFSLC 49
R AD+ + ++ PG++SN Y ++ T C
Sbjct: 335 RGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIAC 370
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 19.8 bits (39), Expect = 2.7
Identities = 10/36 (27%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 15 RSEADWRLEHTEMSKPGRLSN-YLRLVRTRTVFSLC 49
R AD+ + ++ PG++SN Y ++ T C
Sbjct: 46 RGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIAC 81
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.4 bits (38), Expect = 3.6
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 6 YNSLTYNVNRSE 17
YN L YN+N E
Sbjct: 106 YNKLYYNINYIE 117
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.4 bits (38), Expect = 3.6
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 6 YNSLTYNVNRSE 17
YN L YN+N E
Sbjct: 106 YNKLYYNINYIE 117
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.4 bits (38), Expect = 3.6
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 6 YNSLTYNVNRSE 17
YN L YN+N E
Sbjct: 106 YNKLYYNINYIE 117
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.4 bits (38), Expect = 3.6
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 6 YNSLTYNVNRSE 17
YN L YN+N E
Sbjct: 106 YNKLYYNINYIE 117
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.4 bits (38), Expect = 3.6
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 6 YNSLTYNVNRSE 17
YN L YN+N E
Sbjct: 106 YNKLYYNINYIE 117
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.4 bits (38), Expect = 3.6
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 6 YNSLTYNVNRSE 17
YN L YN+N E
Sbjct: 106 YNKLYYNINYIE 117
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.4 bits (38), Expect = 3.6
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 6 YNSLTYNVNRSE 17
YN L YN+N E
Sbjct: 106 YNKLYYNINYIE 117
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.4 bits (38), Expect = 3.6
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 6 YNSLTYNVNRSE 17
YN L YN+N E
Sbjct: 106 YNKLYYNINYIE 117
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.4 bits (38), Expect = 3.6
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 6 YNSLTYNVNRSE 17
YN L YN+N E
Sbjct: 106 YNKLYYNINYIE 117
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 19.4 bits (38), Expect = 3.6
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 6 YNSLTYNVNRSE 17
YN L YN+N E
Sbjct: 339 YNKLYYNINYIE 350
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 19.4 bits (38), Expect = 3.6
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 6 YNSLTYNVNRSE 17
YN L YN+N E
Sbjct: 339 YNKLYYNINYIE 350
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 19.4 bits (38), Expect = 3.6
Identities = 10/39 (25%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 12 NVNRSEADWRLEHTEMSKPGRLSN-YLRLVRTRTVFSLC 49
N + AD+ + ++ PG++SN Y ++ T C
Sbjct: 332 NPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIAC 370
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 19.0 bits (37), Expect = 4.7
Identities = 6/16 (37%), Positives = 11/16 (68%)
Query: 21 RLEHTEMSKPGRLSNY 36
++ E+S+PG L+ Y
Sbjct: 149 KIGRDELSQPGSLNGY 164
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 18.6 bits (36), Expect = 6.3
Identities = 4/10 (40%), Positives = 9/10 (90%)
Query: 11 YNVNRSEADW 20
YN+N+ +++W
Sbjct: 24 YNLNQEDSNW 33
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 18.6 bits (36), Expect = 6.3
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 34 SNYLRLVRTRTVFSL 48
+ Y LVR+RT+ SL
Sbjct: 26 NEYTYLVRSRTLTSL 40
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic
acetylcholine receptor alpha1subunit protein.
Length = 601
Score = 18.2 bits (35), Expect = 8.3
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 33 LSNYLRLVR 41
LSNY RL+R
Sbjct: 29 LSNYNRLIR 37
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 18.2 bits (35), Expect = 8.3
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 33 LSNYLRLVR 41
LSNY RL+R
Sbjct: 29 LSNYNRLIR 37
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 18.2 bits (35), Expect = 8.3
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 33 LSNYLRLVR 41
LSNY RL+R
Sbjct: 42 LSNYNRLIR 50
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.320 0.130 0.385
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,242
Number of Sequences: 429
Number of extensions: 514
Number of successful extensions: 21
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of query: 57
length of database: 140,377
effective HSP length: 37
effective length of query: 20
effective length of database: 124,504
effective search space: 2490080
effective search space used: 2490080
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (19.1 bits)
S2: 35 (18.2 bits)
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