GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002177-TA|BGIBMGA002177-PA|undefined
         (104 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           22   4.0  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    22   5.3  
AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    21   7.0  

>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 11/22 (50%), Positives = 11/22 (50%)

Query: 45   GYGTKFGKSGLDDHGFGNLGDD 66
            G G   GKS  D H  G LG D
Sbjct: 1420 GVGGGGGKSPSDKHNPGTLGTD 1441


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 10/21 (47%), Positives = 12/21 (57%)

Query: 31  VDAKDSPGSLTESVGYGTKFG 51
           +  K SPGS+ ESV    K G
Sbjct: 174 ISPKLSPGSVVESVSRSLKSG 194


>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A
          homeotic protein protein.
          Length = 308

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 11/31 (35%), Positives = 14/31 (45%)

Query: 41 TESVGYGTKFGKSGLDDHGFGNLGDDKVVQN 71
          T    Y T  G SGLDD    +   D V+ +
Sbjct: 10 TTHTSYSTMPGFSGLDDKSCSSRYTDSVMNS 40


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.312    0.136    0.391 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,147
Number of Sequences: 2123
Number of extensions: 2520
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 104
length of database: 516,269
effective HSP length: 55
effective length of query: 49
effective length of database: 399,504
effective search space: 19575696
effective search space used: 19575696
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 42 (21.0 bits)