GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002177-TA|BGIBMGA002177-PA|undefined
         (104 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071177-1|AAL48799.1|  212|Drosophila melanogaster RE23041p pro...    29   1.5  
AE013599-2046|AAF58146.2|  212|Drosophila melanogaster CG8160-PA...    29   1.5  

>AY071177-1|AAL48799.1|  212|Drosophila melanogaster RE23041p
           protein.
          Length = 212

 Score = 28.7 bits (61), Expect = 1.5
 Identities = 15/39 (38%), Positives = 16/39 (41%)

Query: 23  GSDEVGAVVDAKDSPGSLTESVGYGTKFGKSGLDDHGFG 61
           G    G V      P  LTE VGYG   G  G    G+G
Sbjct: 84  GQGGYGGVQGGYGQPAPLTEQVGYGGTQGGYGSAQKGYG 122


>AE013599-2046|AAF58146.2|  212|Drosophila melanogaster CG8160-PA
           protein.
          Length = 212

 Score = 28.7 bits (61), Expect = 1.5
 Identities = 15/39 (38%), Positives = 16/39 (41%)

Query: 23  GSDEVGAVVDAKDSPGSLTESVGYGTKFGKSGLDDHGFG 61
           G    G V      P  LTE VGYG   G  G    G+G
Sbjct: 84  GQGGYGGVQGGYGQPAPLTEQVGYGGTQGGYGSAQKGYG 122


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.312    0.136    0.391 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,044,005
Number of Sequences: 52641
Number of extensions: 126399
Number of successful extensions: 154
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 152
Number of HSP's gapped (non-prelim): 2
length of query: 104
length of database: 24,830,863
effective HSP length: 74
effective length of query: 30
effective length of database: 20,935,429
effective search space: 628062870
effective search space used: 628062870
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 55 (26.2 bits)