GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002174-TA|BGIBMGA002174-PA|undefined
         (436 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    28   0.11 
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    27   0.26 
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    27   0.26 
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    27   0.26 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    24   2.4  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    23   4.2  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 28.3 bits (60), Expect = 0.11
 Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 4/77 (5%)

Query: 122 KELRPDPFKDKYKALLKSRKTPRVELRYNVRDQVKNMKSDALRHENIDLLKTRWPLKKYN 181
           +E  P+ +  K  +L+ SR  P   +    RD  + +    L  +++D    RW  + Y+
Sbjct: 262 REPLPEAYFPKLDSLVASRTWPARPVNQVPRDLNREVDQIRLSLDDMD----RWRDRIYD 317

Query: 182 KVNGQFVFQNNNDNVPL 198
            ++   V  +N  N+PL
Sbjct: 318 AIHSGVVRGDNGQNIPL 334


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 27.1 bits (57), Expect = 0.26
 Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 1/36 (2%)

Query: 320 SVMNKVNNYNELINILSK-KIEEQNNTSMEMANVLF 354
           +++  +   N+   +L   K++ +NN+S  +ANVLF
Sbjct: 75  TILTTITKRNQWCKLLENLKLDRENNSSFVVANVLF 110


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 27.1 bits (57), Expect = 0.26
 Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 1/36 (2%)

Query: 320 SVMNKVNNYNELINILSK-KIEEQNNTSMEMANVLF 354
           +++  +   N+   +L   K++ +NN+S  +ANVLF
Sbjct: 75  TILTTITKRNQWCKLLENLKLDRENNSSFVVANVLF 110


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 27.1 bits (57), Expect = 0.26
 Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 1/36 (2%)

Query: 320 SVMNKVNNYNELINILSK-KIEEQNNTSMEMANVLF 354
           +++  +   N+   +L   K++ +NN+S  +ANVLF
Sbjct: 395 TILTTITKRNQWCKLLENLKLDRENNSSFVVANVLF 430


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.8 bits (49), Expect = 2.4
 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)

Query: 230 SKVDLKTVYNVGTIDAAIQNTTLSIETLIENLLEKSFDGNN 270
           S  DL T     T+  +   ++ S+   IE L+EKSFD  +
Sbjct: 705 SVTDLSTKDGT-TVPESNNGSSPSVLNAIEKLIEKSFDSRS 744


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 23.0 bits (47), Expect = 4.2
 Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 1/36 (2%)

Query: 296 HSIINKTTE-MNRTNIYNQNSDDKPSVMNKVNNYNE 330
           H   N T + M R +   QN +D PS   K    NE
Sbjct: 112 HGTNNGTNKNMRRLSTTTQNKNDDPSYWEKRRKNNE 147


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.314    0.129    0.371 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,342
Number of Sequences: 317
Number of extensions: 4407
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 6
length of query: 436
length of database: 114,650
effective HSP length: 59
effective length of query: 377
effective length of database: 95,947
effective search space: 36172019
effective search space used: 36172019
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 44 (21.8 bits)