Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002174-TA|BGIBMGA002174-PA|undefined
(436 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyce... 32 0.18
SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16 |S... 31 0.32
SPAC9.05 |mfh1||ATP-dependent DNA helicase Mfh1 |Schizosaccharom... 31 0.32
SPCC1393.05 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 31 0.32
SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr 1|... 30 0.55
SPCC1020.08 |||wybutosine biosynthesis protein Tyw1|Schizosaccha... 29 0.97
SPCC4G3.09c |gyp3||GTPase activating protein Gyp3|Schizosaccharo... 29 0.97
SPBC11C11.01 ||SPBC17D1.08|RNA-binding protein|Schizosaccharomyc... 29 1.3
SPAC1142.03c |swi2|SPAC17G6.20c|Swi5 complex subunit Swi2|Schizo... 29 1.7
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 28 2.2
SPAC2E12.02 |hsf1|hstf, hsf|transcription factor Hsf1|Schizosacc... 28 3.0
SPBC530.06c |||translation initiation factor eIF3 alpha subunit ... 27 3.9
SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces pom... 27 3.9
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 27 3.9
SPCC1739.11c |cdc11||SIN component scaffold protein Cdc11|Schizo... 27 3.9
SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual 27 3.9
SPBC660.11 |tcg1|mug187|single-stranded telomeric binding protei... 27 3.9
SPAC1A6.01c ||SPAC23C4.20c|human thyroid receptor interacting pr... 27 5.2
SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase Ppk30|Schizos... 27 5.2
SPBC1711.07 |||WD repeat protein Rrb1 |Schizosaccharomyces pombe... 27 5.2
SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3 Brl2|Schizosa... 27 6.8
SPAC20G8.02 |||phospholipase|Schizosaccharomyces pombe|chr 1|||M... 27 6.8
SPAC11E3.03 |pcs1||chromosome segregation protein Pcs1 |Schizosa... 27 6.8
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 27 6.8
SPBC336.12c |cdc10||MBF transcription factor complex subunit Cdc... 26 9.0
SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces pomb... 26 9.0
>SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1067
Score = 31.9 bits (69), Expect = 0.18
Identities = 14/57 (24%), Positives = 25/57 (43%)
Query: 362 DKSNNLNHTENVSNDKARPTCPFSDTTARNDNVDLQRNYTVTSNDNDTDFPTTESVK 418
D N+ T N + P +D + DN D ++N +SN + + T++ K
Sbjct: 66 DNKNDPKKTHNEDESHTNESLPSTDKKKKKDNDDFKQNLKSSSNKTEEKYSATQASK 122
>SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 672
Score = 31.1 bits (67), Expect = 0.32
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Query: 327 NYNELINILSKKIEEQNNTSMEMANVLFGGIISLEDKSNNLNHTENVSNDKARPTCPFSD 386
NY N S + E + S+E V F I S + +NL T +V D PF+
Sbjct: 434 NYLTQENFDSDNLSESLDNSVENLTV-FPSINSFGRRHSNLPQTTHV--DTGEQNTPFTP 490
Query: 387 TTARNDNVDLQRNYTVTSNDNDT 409
+ N+D +++T SN ++
Sbjct: 491 PLLKTVNLDGNKDFTFPSNSQNS 513
>SPAC9.05 |mfh1||ATP-dependent DNA helicase Mfh1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 834
Score = 31.1 bits (67), Expect = 0.32
Identities = 19/89 (21%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 306 NRTNIYNQNSDDKPSVMNKVNNYNELIN----ILSKKIEEQNNTSMEMANVLFGGIISLE 361
N+ + N NS D+ + K++++ + ++ K+ + N+ S + + + + +LE
Sbjct: 730 NQFQVSNINSTDRDTKQPKMHDFRQPLHPNPMTTLKRKGQHNSFSYDKSTLFYDNNNNLE 789
Query: 362 DKSNNLNHTENVSNDKARPTCPFSDTTAR 390
+ ++N + + N++A T PF D R
Sbjct: 790 EDLPDVNISISSRNEEASKTKPFDDRQQR 818
>SPCC1393.05 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 956
Score = 31.1 bits (67), Expect = 0.32
Identities = 31/131 (23%), Positives = 55/131 (41%), Gaps = 16/131 (12%)
Query: 293 SYYHSIINKTTEMNRTNIYNQNSDDKPSV-MNKVNNYNELINILSKKIEEQNNTSMEMAN 351
S +HS +TE++ +I+ P V N +N+ E+I K+ + ++
Sbjct: 373 SNFHS---SSTELSDNSIHQGRRAVDPVVNQNNPSNFEEMI---MNKLNKLPTIDKQILG 426
Query: 352 VLFGGIISLEDKSNNLNHTENVSNDKARPTC-------PFSDTTARNDNVDLQRNYTVTS 404
+ +DK+ + H+ N SN K P P S+T +L Y+V+S
Sbjct: 427 T--SSLTHFQDKTTAIEHSINKSNSKQPPRFKFQLPPRPTSNTLPLEPEEELVTRYSVSS 484
Query: 405 NDNDTDFPTTE 415
+ N D T+
Sbjct: 485 DGNTVDEAITK 495
>SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1372
Score = 30.3 bits (65), Expect = 0.55
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Query: 301 KTTEMNRTNIYNQNSDDKPSVMNKVNNYNELINILSKKIEEQNNTSMEMANVLFGGIISL 360
KTT +Y +N D+ S NN NE+I + KK N + + F + +L
Sbjct: 1218 KTTLKTTLLMYGENPDEPTSSARFFNNLNEII-LEYKKASTVNQKMEKEEELAFLRLQAL 1276
Query: 361 ED--KSNNLNHTENVSNDKARPT 381
+ KSNN ++ + N++ T
Sbjct: 1277 KASVKSNNAENSGSSKNEEVSAT 1299
>SPCC1020.08 |||wybutosine biosynthesis protein
Tyw1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 688
Score = 29.5 bits (63), Expect = 0.97
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 311 YNQNSDDKPSVMNKVNNYNELINILSKKIE 340
Y+ NSD P M V Y E+I+ + K IE
Sbjct: 548 YSGNSDQSPLTMKNVPYYEEVIDFVKKLIE 577
>SPCC4G3.09c |gyp3||GTPase activating protein
Gyp3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 635
Score = 29.5 bits (63), Expect = 0.97
Identities = 21/108 (19%), Positives = 47/108 (43%), Gaps = 2/108 (1%)
Query: 309 NIYNQNSDDKPSVMNKVNNYNELINILSKKIEEQNNTSMEMANVLFGGIISLEDKSNNLN 368
++YN ++D + VNNY +++ S E + + ++ LE ++N+
Sbjct: 49 DLYNDTTEDDADDADDVNNY--IMSPSSSLSSESEHALDALVYPIYSHHNILEHENNSDY 106
Query: 369 HTENVSNDKARPTCPFSDTTARNDNVDLQRNYTVTSNDNDTDFPTTES 416
+ SN A +C + + N + + + ++ TDF +T +
Sbjct: 107 ASITPSNHPAFTSCAYLQNPVVDSNNEYESKFRLSLEIPPTDFLSTST 154
>SPBC11C11.01 ||SPBC17D1.08|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 493
Score = 29.1 bits (62), Expect = 1.3
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 158 MKSDALRHENIDLLKTRWPLKKYNKVNGQFVFQNNNDNVPLKSNKFFMTTNQENEVNRNG 217
++ + LRHE + K + + G F+ QNN N+ + K+F+ + + V NG
Sbjct: 92 LQEELLRHEAYE--KNEEIANENDVDQGMFIQQNNILNMLVNLMKYFVHMDNISPVTTNG 149
Query: 218 QSKYFKRDLGNISKVDL 234
K R +I V++
Sbjct: 150 SLKESLRKYSSIIAVNI 166
>SPAC1142.03c |swi2|SPAC17G6.20c|Swi5 complex subunit
Swi2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 722
Score = 28.7 bits (61), Expect = 1.7
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 297 SIINKTTEMNRTNIYNQNSDDKPSVMNKVNNYNELINILSKKIEEQNNTSMEMAN 351
+++N+ NRTN+ NS K SV++ NN++ NI+ K NT + N
Sbjct: 462 AVLNENNSKNRTNVTKPNS-YKNSVLSIGNNHSNHSNII--KPNTYKNTILSNEN 513
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 28.3 bits (60), Expect = 2.2
Identities = 25/119 (21%), Positives = 46/119 (38%), Gaps = 4/119 (3%)
Query: 301 KTTEMNRTNIYNQNSDDKPSVMNKVNNYNELINILSKKIEEQNNTSMEMANVLFGGIISL 360
KT + + N N + +K + ++ I+ KK+ Q + + +
Sbjct: 1584 KTGKARKDKGINNNQTSPQNKPSKESLKSDTISN-EKKVFPQKASKVNLLTPTISNGTRA 1642
Query: 361 EDKSNNLNHT--ENVSNDKARPTCPFSDTTARNDNVDLQRNYTVTSNDNDTDFPTTESV 417
+N +T V N+ P P ++T D + RN +ND FPTT ++
Sbjct: 1643 SKHANEKENTFPRGVENNLVAPMIP-NNTELNEDTSAVSRNLENATNDLKETFPTTTTI 1700
>SPAC2E12.02 |hsf1|hstf, hsf|transcription factor
Hsf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 609
Score = 27.9 bits (59), Expect = 3.0
Identities = 17/69 (24%), Positives = 31/69 (44%)
Query: 305 MNRTNIYNQNSDDKPSVMNKVNNYNELINILSKKIEEQNNTSMEMANVLFGGIISLEDKS 364
+N +I N D + +N+ + L+ + NNTS E + + G +S S
Sbjct: 373 VNTGDIINMLDDANSIEGSNMNSLSPLLFDYPNSLYPVNNTSSEQHHNSYRGSVSNSQPS 432
Query: 365 NNLNHTENV 373
NL+ + N+
Sbjct: 433 GNLSESTNL 441
>SPBC530.06c |||translation initiation factor eIF3 alpha subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1173
Score = 27.5 bits (58), Expect = 3.9
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 4/73 (5%)
Query: 344 NTSMEMANVLFGGI-ISLEDKSNNLNHTENVSNDKARPTCPFSDTTARNDNVDLQRNYTV 402
N S++ + GI +S E NN+N V ND AR C F+ R+D + N +
Sbjct: 616 NDSLKSVELEGNGIKLSSEKGKNNVN---KVRNDNARFDCGFNPDCFRSDYIFPPDNKEL 672
Query: 403 TSNDNDTDFPTTE 415
D + + ++
Sbjct: 673 YDKDIENSYALSQ 685
>SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 649
Score = 27.5 bits (58), Expect = 3.9
Identities = 12/50 (24%), Positives = 24/50 (48%)
Query: 300 NKTTEMNRTNIYNQNSDDKPSVMNKVNNYNELINILSKKIEEQNNTSMEM 349
N +++ N+Y QN+ PS N N+ + + E+Q T++ +
Sbjct: 493 NTALNISQVNMYAQNNPVNPSTTNPFQNFLRQPSYQGMQFEQQQPTTIPL 542
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 27.5 bits (58), Expect = 3.9
Identities = 11/45 (24%), Positives = 27/45 (60%)
Query: 332 INILSKKIEEQNNTSMEMANVLFGGIISLEDKSNNLNHTENVSND 376
+N+L++K+ ++N + N + +S + ++NL + EN+ +D
Sbjct: 759 LNLLTEKLNKKNADTESFKNTIREAELSKKALNDNLGNKENIISD 803
>SPCC1739.11c |cdc11||SIN component scaffold protein
Cdc11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1045
Score = 27.5 bits (58), Expect = 3.9
Identities = 18/100 (18%), Positives = 39/100 (39%)
Query: 317 DKPSVMNKVNNYNELINILSKKIEEQNNTSMEMANVLFGGIISLEDKSNNLNHTENVSND 376
++ + +N + Y E+ ++++ N+ E L + L ++ + VS +
Sbjct: 260 ERKASLNTKDLYQEVEEVMARLRGRMPNSGRESTIFLPRKLSGLREEEEQDEISVEVSQE 319
Query: 377 KARPTCPFSDTTARNDNVDLQRNYTVTSNDNDTDFPTTES 416
+ P ++ + T NDND FP+ S
Sbjct: 320 DSSNAFPSLSDQLHLKSLQSMKRVTSIFNDNDDSFPSASS 359
>SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1489
Score = 27.5 bits (58), Expect = 3.9
Identities = 15/57 (26%), Positives = 27/57 (47%)
Query: 304 EMNRTNIYNQNSDDKPSVMNKVNNYNELINILSKKIEEQNNTSMEMANVLFGGIISL 360
E+ T + N +K N+ NNY +++N ++ I ++ M+ L G SL
Sbjct: 1276 ELKYTALSNIVEMEKLGFANRRNNYQDMVNSIALDIRNKSRRRMQRQRELDAGHQSL 1332
>SPBC660.11 |tcg1|mug187|single-stranded telomeric binding protein
Tgc1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 348
Score = 27.5 bits (58), Expect = 3.9
Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Query: 336 SKKIEEQNNTSMEMANVLFGGIISLEDKSNN---LNHTENVSNDKARPTCPFSDTTARND 392
S+ IEE N + ++ + EDK N+ N E + ++ PT T +
Sbjct: 272 SRAIEEMNGKQVGDLTLVVKSAVFREDKQNDENEKNENEPIEASESAPTNVSDSTEPKAS 331
Query: 393 NVDLQRNYTVTSN 405
VD + VT++
Sbjct: 332 EVDSEEKSGVTAS 344
>SPAC1A6.01c ||SPAC23C4.20c|human thyroid receptor interacting
protein homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 455
Score = 27.1 bits (57), Expect = 5.2
Identities = 17/77 (22%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Query: 303 TEMNRTNIYNQNSDDKPSVMNKVNNYNELINILSKKIEEQNNTSMEMANVLFGG----II 358
++ N+ ++ +S + PS+M N NI K ++ S +AN G +
Sbjct: 55 SDFNQKRFHSTHSGNSPSIMKNKKNVTPNNNIRQKNTATSSHPSFYIANNKQKGYDEEMY 114
Query: 359 SLEDKSNNLNHTENVSN 375
+ S N + + N+S+
Sbjct: 115 KVNPASRNKSQSNNISS 131
>SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase
Ppk30|Schizosaccharomyces pombe|chr 2|||Manual
Length = 953
Score = 27.1 bits (57), Expect = 5.2
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 11/79 (13%)
Query: 301 KTTEMNRTNIYNQN-SDDKPSVMNKVNNYNELINILSKKIEEQNNTSMEMANVLFGGIIS 359
K +E + + QN S D PSV N ++ K + +N+ +++ L GG
Sbjct: 546 KPSEFSSSVGSKQNLSMDIPSVQN--------VSTKQKSTNDTDNSKLKINKPLTGGYAP 597
Query: 360 LEDKSNNLNHTENVSNDKA 378
L + N +NH +V N+K+
Sbjct: 598 LPSRPNRMNH--SVLNEKS 614
>SPBC1711.07 |||WD repeat protein Rrb1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 480
Score = 27.1 bits (57), Expect = 5.2
Identities = 14/67 (20%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 146 ELRYNVRDQVKNMKSDALRHENIDLLKTRWPLKKYNKVNGQFVFQNNNDNVPLKSNKFFM 205
E+ +N++ + + D L+ +++ + WP + Y Q + N+N+ +K ++ +
Sbjct: 95 EMLHNIQVKWPFLSFDILQ-DSLGEERRAWPHQMYLVGGSQALDSNDNELTVMKLSQLYK 153
Query: 206 TTNQENE 212
T + EN+
Sbjct: 154 TQHDEND 160
>SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3
Brl2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 680
Score = 26.6 bits (56), Expect = 6.8
Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 2/69 (2%)
Query: 309 NIYNQNSDDKPSVMNKVNNYNELINILSKKIEEQNNTSMEMANVLFGGIISLEDKSNNLN 368
N+ +Q S + V ++Y LIN L +I N + N +SLE K
Sbjct: 322 NVLSQQSKNFNGVFE--SSYQPLINDLDHQISVMQNDEKRINNAKTELSLSLEKKLEAKK 379
Query: 369 HTENVSNDK 377
E V DK
Sbjct: 380 QKEKVYKDK 388
>SPAC20G8.02 |||phospholipase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 757
Score = 26.6 bits (56), Expect = 6.8
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 380 PTCPFSDTTARNDNVDLQRNYTVTSNDNDTDFPT 413
PT + TT ND+ D N+T ++ ++ D P+
Sbjct: 299 PTEELTSTTLLNDSSDPSDNFTPSNTESTIDLPS 332
>SPAC11E3.03 |pcs1||chromosome segregation protein Pcs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 222
Score = 26.6 bits (56), Expect = 6.8
Identities = 12/36 (33%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Query: 151 VRDQVKNMKSDALRHENI--DLLKTRWPLKKYNKVN 184
V+D K ++++ + ++ +LLKTR +K Y+K+N
Sbjct: 96 VKDLKKELENEKKANHSLKNELLKTREQIKNYSKIN 131
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 26.6 bits (56), Expect = 6.8
Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 6/82 (7%)
Query: 337 KKIEEQNNTSMEMANVLFGGIISLEDKSNNLNHTENVSNDKARPTCPFSDTTARNDNVDL 396
K + ++ +E + V+ G S S+ + +++ K P + TA D
Sbjct: 876 KSTQRDSSKKLENSTVVSGSPSS----SSKSDAAKSIKPQKPEPALKPVEGTA--DPKST 929
Query: 397 QRNYTVTSNDNDTDFPTTESVK 418
+RN+ T DTD +TE VK
Sbjct: 930 KRNHQETEKTADTDVSSTEPVK 951
>SPBC336.12c |cdc10||MBF transcription factor complex subunit
Cdc10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 767
Score = 26.2 bits (55), Expect = 9.0
Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 188 VFQNNNDNVPLKSNKFFMTTNQENEVNRNG-QSKYFKRDLGNISK----VDLKTVYNVGT 242
V +NNN N+ + KF + + NE N +K ++R+ SK V L T +
Sbjct: 670 VNENNNKNLSIAELKFQVAAYERNEARLNELANKLWQRNSNIKSKCRRVVSLCTGVDESR 729
Query: 243 IDAAIQNTTLSIET 256
+D+ +++ ++E+
Sbjct: 730 VDSLLESLLQAVES 743
>SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 368
Score = 26.2 bits (55), Expect = 9.0
Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 309 NIYNQNSDDKPSVMNKVNNYNELINILSKKIEEQNNTSMEMANVLFGGIISLEDKS 364
N+ +N + V++ V+ + I+ L +KI+ Q N +E +++ G I +DK+
Sbjct: 2 NLTFKNLQQQKFVISDVSADTK-ISELKEKIQTQQNYEVERQKLIYSGRILADDKT 56
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.314 0.129 0.371
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,021,433
Number of Sequences: 5004
Number of extensions: 91264
Number of successful extensions: 252
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 238
Number of HSP's gapped (non-prelim): 30
length of query: 436
length of database: 2,362,478
effective HSP length: 75
effective length of query: 361
effective length of database: 1,987,178
effective search space: 717371258
effective search space used: 717371258
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 55 (26.2 bits)
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