Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002173-TA|BGIBMGA002173-PA|IPR002018|Carboxylesterase,
type B
(867 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC417.12 |||carboxylesterase-lipase family |Schizosaccharomyce... 53 1e-07
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 38 0.006
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 33 0.17
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.91
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 30 1.2
SPBC106.11c |plg7||phospholipase A2 |Schizosaccharomyces pombe|c... 29 2.1
SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces p... 29 2.8
SPBC23G7.08c |rga7||GTPase activating protein Rga7|Schizosacchar... 29 3.7
SPCC1450.10c |||iron hydrogenase large subunit |Schizosaccharomy... 29 3.7
SPBC2D10.14c |myo51||myosin type V|Schizosaccharomyces pombe|chr... 27 8.4
>SPCC417.12 |||carboxylesterase-lipase family |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 520
Score = 53.2 bits (122), Expect = 1e-07
Identities = 48/211 (22%), Positives = 87/211 (41%), Gaps = 15/211 (7%)
Query: 78 YPVIVFIHG------ESFEWNSGNVYDGSVLASYAGLVVITINYRLGILGFLNANPIPHL 131
+PV+ FIHG + + D S A ++++ +RL + GFL +
Sbjct: 99 WPVLYFIHGGWLQVGNPLHYRQCDPQDLQADGSPAKFILVSPGHRLNLFGFLAGKELLEE 158
Query: 132 KARVANYGLMDQIAALHWVQQNIALFGGDAGNVTMLGHGSGAACINFLMISPTV---MQG 188
+ +N+G DQ L W ++I FGG+ N+ + G +G+ F +I T
Sbjct: 159 DPKSSNFGFWDQRLGLEWTYKHIESFGGNKENIAVGGISAGSYSALFQLIYETYHPEANQ 218
Query: 189 LFHRXXXXXXXXXXXXXXVEDPVSYAVQLAKQSNCTLPEDIVKDHELIVDCLREVPLEEL 248
+ R VE+ +LA++ +P ++ +L + LR +P ++L
Sbjct: 219 IIKRALLLSNGLSVQPKSVEESQIQFNELAQKFG--IPLELSSAEKL--EKLRAIPFQDL 274
Query: 249 MSEAINTPSYLTAFGPSVDGVVVKTDYAKEL 279
+N L F DG V + K++
Sbjct: 275 ADNILNL--RLHTFRAVTDGDFVNPNTFKDI 303
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 37.9 bits (84), Expect = 0.006
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Query: 617 TTMDTYVTTCISVMSARPGSAV--TQSQVPNNTHTQDVSNLEVAGYTAYSTALSVTIAIG 674
TTM + +T IS ++ P S+ T S+VP++T ++ + + +T+ + V I IG
Sbjct: 242 TTMSS--STFISTVTVTPSSSSSSTSSEVPSSTAALALNASKASNHTSLNAGAIVGIVIG 299
Query: 675 C--SLLILNVLIFAGVYYQRDKTRLQVKA 701
C +++ + IF Y++R K R+ A
Sbjct: 300 CVAFAVVMALCIFLYFYFRRFKIRMSDSA 328
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 33.1 bits (72), Expect = 0.17
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Query: 696 RLQVKALQQQQKRNHNSTFDSVSSK----HPHYFVGHSQSSSTIVDIDHQD 742
R V + + +R+ ST SSK H H+ GH+ SSST + HQD
Sbjct: 1279 RTSVSRSKSKAERHETSTSSRKSSKSGEHHHHHNEGHADSSSTRTSLAHQD 1329
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 30.7 bits (66), Expect = 0.91
Identities = 12/48 (25%), Positives = 30/48 (62%)
Query: 214 AVQLAKQSNCTLPEDIVKDHELIVDCLREVPLEELMSEAINTPSYLTA 261
AV+++ Q + LP+ + ++ +I+ + +P+E+L+ + + P +L A
Sbjct: 909 AVEISDQRSSLLPDTVEQNMAIILRSVSNMPVEDLVQKFLVEPDFLPA 956
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 30.3 bits (65), Expect = 1.2
Identities = 49/258 (18%), Positives = 91/258 (35%), Gaps = 13/258 (5%)
Query: 589 PLTRANYFDPTLELYRKPIYNVTLDVPSTTMDTYVTTCISVMSARPGSAVTQSQVPNNTH 648
PLT AN T P YN + +P++++ + + + +A S+ S V N+T
Sbjct: 390 PLTSANSTTSTSVSSTAPSYNTSSVLPTSSVSSTPLSSANSTTATSASSTPLSSV-NSTT 448
Query: 649 TQDVSNLEVAGYTAYSTALSVTIAIGCSLLILNVLIFAGVYYQRDKTRLQVKALQQQQKR 708
S+ ++ + +TA S + S+ + + A
Sbjct: 449 ATSASSTPLSSVNS-TTATSASSTPLTSVNSTTATSASSTPLTSVNSTSATSASSTPLTS 507
Query: 709 NHNSTFDSVSSKHPHYFVGHSQSSSTIVDIDHQDKNAIIAMTNRVPHFTGTNCPNVCHTG 768
+++T SVSS P Y +S++ N+ T T+ + T
Sbjct: 508 ANSTTSTSVSSTAPSYNTSSVLPTSSVSSTPLSSANST----------TATSASSTPLTS 557
Query: 769 IQMSNLTQKSSPPSNRGQCTTLPRKVGFSYQQPNQ-ICNASNCMTLPKNATFSANNLPDV 827
+ + T SS P T+ + N + S +T P + S + +
Sbjct: 558 VNSTTATSASSTPFGNSTITSSASGSTGEFTNTNSGNGDVSGSVTTPTSTPLSNSTVAPT 617
Query: 828 QAQTGQSQSAGNGVPPSS 845
T + +G+P SS
Sbjct: 618 STFTSSGFNTTSGLPTSS 635
>SPBC106.11c |plg7||phospholipase A2 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 438
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 69 IFGPTLQAKYPVIVFIHGESFEWNSGNVYDG--SVLASYAGLVVITINYR 116
+F P K PV +F HG S NVY +ASY G+VV+ + +R
Sbjct: 107 LFHPPNNGKLPVFIFSHGLV---GSRNVYSSLCGTIASY-GIVVLAMEHR 152
>SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 275
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 625 TCISVMSARPGSAVTQSQVPNNTHTQDVSNLEVAG 659
T IS + + G+ V Q PN+ ++V+NLE G
Sbjct: 196 TKISESNEKSGTEVEQQSAPNSNGNEEVNNLEPVG 230
>SPBC23G7.08c |rga7||GTPase activating protein
Rga7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 28.7 bits (61), Expect = 3.7
Identities = 28/84 (33%), Positives = 36/84 (42%), Gaps = 5/84 (5%)
Query: 779 SPPSNRGQC-TTLPRKVGFSYQQPNQICNASNCMTLPKNATFSANNL-PDVQAQTGQSQS 836
SP N +T P S PN + SN T P +A+ A+ L P T S S
Sbjct: 365 SPLQNTNPAPSTFPNPSVASPAFPNS--STSNPSTAPASASPLASTLKPSTANDTNGSSS 422
Query: 837 AGNGVP-PSSPQAQHFSQKPRVPQ 859
+ + P SSP A + KP V Q
Sbjct: 423 SSSSNPRTSSPLASNAENKPPVAQ 446
>SPCC1450.10c |||iron hydrogenase large subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 538
Score = 28.7 bits (61), Expect = 3.7
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 5/74 (6%)
Query: 702 LQQQQKRNHNSTFDSVSSKHPHYFVGHSQSSSTIVDIDHQDKNAIIAMTNRVPHFTGTNC 761
LQ + +N N +SV ++HP + HS S + V + + I N V ++C
Sbjct: 163 LQSRAHKNQNQVTNSVVNEHP--LIPHSTSQISGVHSNTSSNSGI--NENAVLPILSSSC 218
Query: 762 PN-VCHTGIQMSNL 774
P +C+ SNL
Sbjct: 219 PGWICYVEKTHSNL 232
>SPBC2D10.14c |myo51||myosin type V|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1471
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 95 NVYDGSVLASYAGLVVITINYRLGILGFLNANPIPH 130
N Y+ + +Y+G+V+++IN + F N N I H
Sbjct: 87 NRYNNKQIYTYSGIVLVSINPYQNLPEFYNDNLIKH 122
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.319 0.134 0.400
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,111,108
Number of Sequences: 5004
Number of extensions: 179618
Number of successful extensions: 490
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 481
Number of HSP's gapped (non-prelim): 12
length of query: 867
length of database: 2,362,478
effective HSP length: 79
effective length of query: 788
effective length of database: 1,967,162
effective search space: 1550123656
effective search space used: 1550123656
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 58 (27.5 bits)
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