Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002173-TA|BGIBMGA002173-PA|IPR002018|Carboxylesterase,
type B
(867 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g37060.1 68418.m04448 cation/hydrogen exchanger, putative (CH... 40 0.005
At5g27320.1 68418.m03262 expressed protein similar to PrMC3 [Pin... 37 0.066
At3g63010.1 68416.m07078 expressed protein similar to PrMC3 [Pin... 35 0.27
At5g23530.1 68418.m02761 expressed protein contains similarity t... 33 0.82
At2g29610.1 68415.m03597 F-box family protein contains Pfam prof... 33 1.1
At3g05120.1 68416.m00556 expressed protein low similarity to PrM... 32 1.4
At5g58460.1 68418.m07321 cation/hydrogen exchanger, putative (CH... 32 1.9
At1g78310.1 68414.m09126 VQ motif-containing protein contains PF... 31 2.5
At3g02410.1 68416.m00228 hypothetical protein weak similarity to... 31 3.3
At4g07410.1 68417.m01136 transducin family protein / WD-40 repea... 31 4.4
At2g31720.1 68415.m03871 expressed protein contains Pfam profile... 30 5.8
At1g36060.1 68414.m04481 AP2 domain-containing transcription fac... 30 7.6
>At5g37060.1 68418.m04448 cation/hydrogen exchanger, putative
(CHX24) similar to Na+/H+-exchanging protein NapA -
Enterococcus hirae, PIR:A42111; monovalent cation:proton
antiporter family 2 (CPA2) member, PMID:11500563
Length = 859
Score = 40.3 bits (90), Expect = 0.005
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 352 IIRTYVRNAYTYHLSEIFFTIVNEY-TDWERTVQH-PINTRDAAVLAISDAQYVAPLVQT 409
++ T V A T L F+ Y + RT+QH P NT VLA+SD + ++ L+
Sbjct: 448 VLHTVVVTAVTTPLINFFYDPTRPYRSSKHRTIQHTPQNTEMGLVLAVSDHETLSGLITF 507
Query: 410 GDFLSVAKSSP 420
DF KSSP
Sbjct: 508 LDFAYPTKSSP 518
>At5g27320.1 68418.m03262 expressed protein similar to PrMC3 [Pinus
radiata] GI:5487873
Length = 344
Score = 36.7 bits (81), Expect = 0.066
Identities = 20/42 (47%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Query: 79 PVIVFIHGESFEWNSGN--VYDGSV--LASYAGLVVITINYR 116
PVIVF HG SF +S N +YD L G VV+++NYR
Sbjct: 105 PVIVFFHGGSFAHSSANSAIYDTLCRRLVGLCGAVVVSVNYR 146
>At3g63010.1 68416.m07078 expressed protein similar to PrMC3 [Pinus
radiata] GI:5487873
Length = 358
Score = 34.7 bits (76), Expect = 0.27
Identities = 17/42 (40%), Positives = 27/42 (64%), Gaps = 4/42 (9%)
Query: 79 PVIVFIHGESFEWNSGN--VYDGSV--LASYAGLVVITINYR 116
PV++F HG SF +S N +YD L + G+VV++++YR
Sbjct: 107 PVLIFFHGGSFTHSSANSAIYDTFCRRLVTICGVVVVSVDYR 148
>At5g23530.1 68418.m02761 expressed protein contains similarity to
PrMC3 [Pinus radiata] GI:5487873
Length = 335
Score = 33.1 bits (72), Expect = 0.82
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 63 SRSSYF-IFGPTLQA-KYPVIVFIHGESFEWNSGNVYD-GSVLASYAGLV---VITINYR 116
SR +F ++ P + K PV+VF HG F + S N Y +V +A + VI++NYR
Sbjct: 70 SRDLWFRLYTPHVSGDKIPVVVFFHGGGFAFLSPNAYPYDNVCRRFARKLPAYVISVNYR 129
Query: 117 L 117
L
Sbjct: 130 L 130
>At2g29610.1 68415.m03597 F-box family protein contains Pfam profile
PF00646: F-box domain
Length = 328
Score = 32.7 bits (71), Expect = 1.1
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Query: 441 PQRMGSVHGEELPYLFGAP--LVEGL-GHFPKNYTKSEVALSESFIQYI 486
PQ +H E LP L P L+E + HFP+ Y+ S + + E+F Q I
Sbjct: 88 PQEQ-KIHNENLPILLQLPEELIERIIAHFPQCYSPSPILVCETFRQVI 135
>At3g05120.1 68416.m00556 expressed protein low similarity to PrMC3
[Pinus radiata] GI:5487873
Length = 345
Score = 32.3 bits (70), Expect = 1.4
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Query: 79 PVIVFIHGESFEWNSGN--VYDGSV--LASYAGLVVITINYR 116
PVI+F HG SF +S N +YD L VV+++NYR
Sbjct: 107 PVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYR 148
>At5g58460.1 68418.m07321 cation/hydrogen exchanger, putative
(CHX25) similar to Na+/H+-exchanging protein slr1595,
Synechocystis sp., PIR:S74951; monovalent cation:proton
antiporter family 2 (CPA2) member, PMID:11500563
Length = 857
Score = 31.9 bits (69), Expect = 1.9
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 381 RTVQH-PINTRDAAVLAISDAQYVAPLVQTGDFLSVAKSSPDS 422
RT+QH P NT VLA++D + L+ DF K+SP S
Sbjct: 479 RTIQHTPQNTETGLVLAVTDHDTFSGLITFLDFAYPTKTSPFS 521
>At1g78310.1 68414.m09126 VQ motif-containing protein contains
PF05678: VQ motif
Length = 311
Score = 31.5 bits (68), Expect = 2.5
Identities = 25/92 (27%), Positives = 36/92 (39%), Gaps = 2/92 (2%)
Query: 757 TGTNCPNVCHTGIQMSNLTQKSSPPSNRGQCTTLP-RKVGFSYQQPNQICNASNCMTLPK 815
TG N N H Q++ L+ K S P+N ++ R++ P QI + P
Sbjct: 22 TGNNTTNRDHYLRQLNKLSHKISKPTNSSSSVSVANREIDLPPPPPLQINQGNLHQHQPP 81
Query: 816 NATFSANNLPD-VQAQTGQSQSAGNGVPPSSP 846
+ N+ D VQ TG PP P
Sbjct: 82 VYNINKNDFRDVVQKLTGSPAHERISAPPQQP 113
>At3g02410.1 68416.m00228 hypothetical protein weak similarity to
kynurenine formamidase [Mus musculus] GI:21552719
Length = 422
Score = 31.1 bits (67), Expect = 3.3
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 72 PTLQAKYPVIVFIHGESFEWNSGNVYDGSVLASYAGLVVITINYRLGILGFLNANPIPHL 131
PT PV+VF+ G + W G GS+L GL + + + L + N P +
Sbjct: 144 PTSDGLKPVVVFVTGGA--WIIGYKAWGSLL----GLQLAERDIIVACLDYRNF-PQGTI 196
Query: 132 KARVANYGLMDQIAALHWVQQNIALFGGDAGNVTMLGHGSGA 173
V+ D + +V NI+ FGGD + ++G +GA
Sbjct: 197 SDMVS-----DAAQGISFVCNNISAFGGDPNRIYLMGQSAGA 233
>At4g07410.1 68417.m01136 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400) (2
weak); similar to Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 815
Score = 30.7 bits (66), Expect = 4.4
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 703 QQQQKRNHNSTFDSVSSKHPHYFVGHSQSSSTIV 736
Q + K N F+ + S HP FVGH +S +V
Sbjct: 758 QLEGKSNERKNFEILPSNHPVLFVGHLSKNSILV 791
>At2g31720.1 68415.m03871 expressed protein contains Pfam profile
PF03754: Domain of unknown function (DUF313)
Length = 313
Score = 30.3 bits (65), Expect = 5.8
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 305 RSGDRIFGIRGGQNKYDLLFGVVTSEALWKFSAQDI-QNGFEGE-RRDRIIRTYVRNAYT 362
R D++ G++GG+ D+L V T + F+ ++I + EG+ RR+R+ R +R
Sbjct: 3 RGDDQLNGLQGGKRALDILC-VATERTVSAFAYEEIGETSTEGDKRRERLRR--LRRLIN 59
Query: 363 YHLS 366
Y LS
Sbjct: 60 YSLS 63
>At1g36060.1 68414.m04481 AP2 domain-containing transcription
factor, putative similar to AP2 domain transcription
factor GI:4567204 from [Arabidopsis thaliana]
Length = 314
Score = 29.9 bits (64), Expect = 7.6
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 815 KNATFSANNLPDVQAQTGQSQSAGNGVPPSSPQAQHFSQKPRVP 858
K A SA Q +G +S G+G P S Q Q+P +P
Sbjct: 249 KAAASSAEQPSAPQQHSGSGESDGSGSPTSDVMVQEMCQEPEMP 292
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.319 0.134 0.400
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,776,192
Number of Sequences: 28952
Number of extensions: 890763
Number of successful extensions: 2154
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 2151
Number of HSP's gapped (non-prelim): 12
length of query: 867
length of database: 12,070,560
effective HSP length: 87
effective length of query: 780
effective length of database: 9,551,736
effective search space: 7450354080
effective search space used: 7450354080
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 64 (29.9 bits)
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