GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002171-TA|BGIBMGA002171-PA|IPR001128|Cytochrome P450
         (389 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...   161   7e-42
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    77   2e-16
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    75   1e-15
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   7.8  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score =  161 bits (392), Expect = 7e-42
 Identities = 95/276 (34%), Positives = 148/276 (53%), Gaps = 14/276 (5%)

Query: 117 LKDHFPSLSKKLGFTIIPKSTSEFFRTLIASTVDYRIKNKVERRDMIQLLMQL------- 169
           LK   P L   LG+ +  ++ + FF  ++  T+ YR  N + R D I +LM+L       
Sbjct: 225 LKQFMPRLYDLLGYVMPDRTFAPFFTRVVTDTIKYRNDNNIVRPDFINMLMELQKNPQKL 284

Query: 170 -STEWTETELAAQLFVFFVAGFETTGNTLINCIHELALSPHIQDILYEELKAF-KETKGN 227
            + + T++ +AAQ FVFF+AGFET+  T+ N ++ELAL+  +Q  L EE+  F  +    
Sbjct: 285 ENIKLTDSLIAAQAFVFFLAGFETSSTTMSNALYELALNQDVQKKLREEINTFCPKNNKE 344

Query: 228 LVYENIGELKYLDCVLNETMRKWSAAIFVDRICTKPYVLPPPREGGKPCQLKPGEVIYNT 287
           L Y++I E++YLD V  ET+R +  A  + R     Y     +    P ++K    I+  
Sbjct: 345 LKYDDIKEMEYLDKVFKETLRMYPPASILMRKAISDYTFNDTKIT-IPKEMK----IWIP 399

Query: 288 VNSIHMDPIYYEEPEKFIPERFLDENKHKIKPFTFMPFGVGPRYCIGSRFALMEMKILLF 347
             +IH D   Y  P+ F PERF  +      P  ++PFG GPR CIG+RFA+ + K+ L 
Sbjct: 400 AFAIHRDSAIYPNPDSFDPERFDQDAMASRHPMHYLPFGDGPRNCIGARFAVYQTKVGLI 459

Query: 348 RLMLNFKVLKCAKTLDPIKMSPVGFNMNIWGGSWVK 383
            ++ N KV  C KT+ P +  P  F ++   G ++K
Sbjct: 460 TILRNHKVEVCEKTIIPYEFDPGAFLLSPKDGIYLK 495



 Score = 72.5 bits (170), Expect = 6e-15
 Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 1/101 (0%)

Query: 17  VYKAFPNERYVGFTDGVCPGIFIRDPEIIKHVTVKEFDHFVNNKDLSPEGEESILKNSLI 76
           +Y+ + NE  VG      P + + DPE+IK + +++F  F N + L        L   L+
Sbjct: 63  IYEKYKNEPMVGLYATRSPFLLLNDPELIKDILIRDFSKFAN-RGLGVFERTEPLSPHLL 121

Query: 77  MLKDEKWRKMRAALSPAFTASKMREMVPLITEISHNIVEYL 117
            L+ E+WR +R+ LSP FT+ K++EM  LI E S N+  YL
Sbjct: 122 NLEVERWRPLRSRLSPIFTSGKLKEMFYLIIECSLNLETYL 162


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 77.4 bits (182), Expect = 2e-16
 Identities = 47/183 (25%), Positives = 86/183 (46%), Gaps = 6/183 (3%)

Query: 174 TETELAAQLFVFFVAGFETTGNTLINCIHELALSPHIQDILYEEL-KAFKETKGNLVYEN 232
           T+ E+  Q+      G +TT +     +  +   P IQ+ + +EL + F ++     +++
Sbjct: 334 TDKEVKEQVDTIMFEGHDTTASGSSFFLAVMGCHPDIQEKVIQELDEIFGDSDRPATFQD 393

Query: 233 IGELKYLDCVLNETMRKWSAAIFVDRICTKPYVLPPPREGGKPCQLKPGEVIYNTVNSIH 292
             E+KYL+  L ET+R +     + R       L           +  G  +      +H
Sbjct: 394 TLEMKYLERCLLETLRMYPPVPLIAREIKTDLKL-----ASGDYTIPAGCTVVIGTFKLH 448

Query: 293 MDPIYYEEPEKFIPERFLDENKHKIKPFTFMPFGVGPRYCIGSRFALMEMKILLFRLMLN 352
             P  Y  P+ F P+ FL E       + F+PF  GPR C+G ++A++++KI+L  ++ N
Sbjct: 449 RQPHIYPNPDVFDPDNFLPEKTANRHYYAFVPFSAGPRSCVGRKYAMLKLKIVLSTILRN 508

Query: 353 FKV 355
           F+V
Sbjct: 509 FRV 511



 Score = 29.9 bits (64), Expect = 0.039
 Identities = 11/48 (22%), Positives = 26/48 (54%)

Query: 71  LKNSLIMLKDEKWRKMRAALSPAFTASKMREMVPLITEISHNIVEYLK 118
           L + L++   +KWR  R  ++P F  + ++  + L    + ++VE ++
Sbjct: 122 LGDGLLISTGQKWRNHRKLIAPTFHLNVLKSFIDLFNANARSVVEKMR 169


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 74.5 bits (175), Expect = 1e-15
 Identities = 47/177 (26%), Positives = 83/177 (46%), Gaps = 8/177 (4%)

Query: 180 AQLFVFFVAGFETTGNTLINCIHELALSPHIQDILYEELKAFKETKGNLVYENIGELKYL 239
           A +  F  AG  T GNTL+     +  +P +Q+ LYEE  A      +L  +N+ + KYL
Sbjct: 322 AAIVDFIAAGIHTLGNTLVFLFDLIGRNPTVQNKLYEETYALAPAGCDLTIDNLRKAKYL 381

Query: 240 DCVLNETMRKWSAAIFVDRICTKPYVLPPPREGGKPCQLKPGEVIYNTVNSIHMDPIYYE 299
              + E++R       + RI  +P  L   R       L  G V+        ++   ++
Sbjct: 382 RACITESLRLIPTTTCIARILDEPIELSGYR-------LTAGTVVLLHTWIAGLNEENFK 434

Query: 300 EPEKFIPERFLDENKHKIKPFTFMPFGVGPRYCIGSRFALMEMKILLFRLMLNFKVL 356
           + +K++PER+         P    PFG G R C G RF  + ++++L +++  F+++
Sbjct: 435 DAKKYLPERWTTPTTPH-SPLLVAPFGAGRRICPGKRFVDLALQLILAKIIREFEII 490


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.2 bits (45), Expect = 7.8
 Identities = 10/38 (26%), Positives = 19/38 (50%)

Query: 188 AGFETTGNTLINCIHELALSPHIQDILYEELKAFKETK 225
           +G   T + L+ C+H    + HI+  L+    + K +K
Sbjct: 138 SGSSLTKSRLMRCLHHDIENAHIRRTLHMNRTSLKTSK 175


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.323    0.140    0.428 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,140
Number of Sequences: 429
Number of extensions: 5592
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 6
length of query: 389
length of database: 140,377
effective HSP length: 59
effective length of query: 330
effective length of database: 115,066
effective search space: 37971780
effective search space used: 37971780
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 45 (22.2 bits)