Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002167-TA|BGIBMGA002167-PA|IPR006020|Phosphotyrosine
interaction region
         (448 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    23   5.2  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    23   5.2  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    23   5.2  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    23   5.2  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    23   5.2  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    23   6.9  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    23   6.9  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   9.1  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    22   9.1  

>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 23.0 bits (47), Expect = 5.2
 Identities = 9/42 (21%), Positives = 25/42 (59%)

Query: 324 TASTAASDSEPTSLPSLPQEDKVAEETGDRIGNYSNEVNHVP 365
           T  ++ +DS+ T+LP+L  +++ + ++   + +  +  N +P
Sbjct: 125 TTVSSEADSDVTTLPTLIGKNETSTQSSRSVESVEDFDNEIP 166


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 23.0 bits (47), Expect = 5.2
 Identities = 9/42 (21%), Positives = 25/42 (59%)

Query: 324 TASTAASDSEPTSLPSLPQEDKVAEETGDRIGNYSNEVNHVP 365
           T  ++ +DS+ T+LP+L  +++ + ++   + +  +  N +P
Sbjct: 173 TTVSSEADSDVTTLPTLIGKNETSTQSSRSVESVEDFDNEIP 214


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 23.0 bits (47), Expect = 5.2
 Identities = 7/17 (41%), Positives = 12/17 (70%)

Query: 351 GDRIGNYSNEVNHVPIG 367
           G R+G Y N ++ +P+G
Sbjct: 203 GPRLGRYDNGIDPLPLG 219


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 23.0 bits (47), Expect = 5.2
 Identities = 9/42 (21%), Positives = 25/42 (59%)

Query: 324 TASTAASDSEPTSLPSLPQEDKVAEETGDRIGNYSNEVNHVP 365
           T  ++ +DS+ T+LP+L  +++ + ++   + +  +  N +P
Sbjct: 173 TTVSSEADSDVTTLPTLIGKNETSTQSSRSVESVEDFDNEIP 214


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 23.0 bits (47), Expect = 5.2
 Identities = 9/42 (21%), Positives = 25/42 (59%)

Query: 324 TASTAASDSEPTSLPSLPQEDKVAEETGDRIGNYSNEVNHVP 365
           T  ++ +DS+ T+LP+L  +++ + ++   + +  +  N +P
Sbjct: 173 TTVSSEADSDVTTLPTLIGKNETSTQSSRSVESVEDFDNEIP 214


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 6.9
 Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 1/42 (2%)

Query: 323 ETASTAASDSEPTSLPSLPQEDKVAEETGDRIGNYSNEVNHV 364
           E  ST++  S+   +  + + +K  E   ++ GNY N V+H+
Sbjct: 194 EVESTSSLHSD-MPIERILEAEKRVECKMEQQGNYENAVSHI 234


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 6.9
 Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 1/42 (2%)

Query: 323 ETASTAASDSEPTSLPSLPQEDKVAEETGDRIGNYSNEVNHV 364
           E  ST++  S+   +  + + +K  E   ++ GNY N V+H+
Sbjct: 194 EVESTSSLHSD-MPIERILEAEKRVECKMEQQGNYENAVSHI 234


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.2 bits (45), Expect = 9.1
 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)

Query: 222  TLDRRRPDVKSPRKMSCPEGIMNRLLASPGS 252
            TLD+RRPD++       P     +L   PGS
Sbjct: 1631 TLDKRRPDLRDELGYIAPPN--RKLPPVPGS 1659


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 22.2 bits (45), Expect = 9.1
 Identities = 11/25 (44%), Positives = 15/25 (60%)

Query: 154 RRKILLSVGSMNYRPPLERSKSAPK 178
           RR+++LS GS+N    L  S   PK
Sbjct: 314 RREVILSAGSVNTPQLLMLSGIGPK 338


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.311    0.127    0.364 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,407
Number of Sequences: 429
Number of extensions: 4420
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 9
length of query: 448
length of database: 140,377
effective HSP length: 60
effective length of query: 388
effective length of database: 114,637
effective search space: 44479156
effective search space used: 44479156
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 45 (22.2 bits)