Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002167-TA|BGIBMGA002167-PA|IPR006020|Phosphotyrosine
interaction region
(448 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0876 - 32654209-32654238,32654357-32654672,32654833-326549... 34 0.27
01_06_0727 - 31517592-31518600,31519999-31520225 33 0.35
11_01_0068 + 551578-551661,552158-552274,557142-557210,557211-55... 33 0.46
01_03_0003 + 11509530-11512772 31 1.9
02_04_0115 - 19888252-19888406,19888507-19888573,19888867-198891... 31 2.5
12_01_0069 + 598704-598784,599161-599277,600681-600872,601004-60... 30 4.3
04_04_0648 - 26936123-26936447,26936540-26936841,26937043-269379... 29 5.7
01_06_0645 + 30826267-30826307,30826403-30826454,30826580-308266... 29 5.7
11_01_0055 + 421459-421620,422356-422697,422934-423051,423132-42... 29 7.6
10_05_0056 + 8635567-8635782,8636275-8637006,8637088-8637531,863... 29 7.6
08_02_1382 + 26565137-26565210,26565330-26565468,26565489-265656... 29 7.6
01_01_0245 + 2013821-2014171,2014278-2014671,2015158-2015289,201... 29 7.6
>01_06_0876 -
32654209-32654238,32654357-32654672,32654833-32654901,
32655238-32655275,32655418-32655478,32655550-32655617,
32655729-32655889,32656687-32656751,32656883-32656956,
32658158-32658245,32658800-32658879,32659168-32659224,
32659332-32659404,32659524-32659762,32659846-32660025,
32660150-32660440
Length = 629
Score = 33.9 bits (74), Expect = 0.27
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Query: 369 KNGFRRRSTYPPLSASILSNFEENFESLIDNLTDADSLTSSTETEVFKSVGDSDSAC-SD 427
K G+RR P L + + L++ TD D L+ + EV + + D S+C S
Sbjct: 500 KGGYRRVIQRPIDFEWDLITYTDEKIPLVE--TDLDVLSKTKPLEVNELLSDGISSCTSH 557
Query: 428 ESGYSEFLDGKESIIGNTIMV 448
+SG LD ESI G +++V
Sbjct: 558 DSGLEASLDASESINGASLVV 578
>01_06_0727 - 31517592-31518600,31519999-31520225
Length = 411
Score = 33.5 bits (73), Expect = 0.35
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 40 DVVMKLSVTNSGLKGFTKEHGLTEYWS 66
DVV KL VT+ G + F + HGL ++WS
Sbjct: 352 DVVAKLFVTSKGPQKFLEAHGLEQWWS 378
>11_01_0068 +
551578-551661,552158-552274,557142-557210,557211-557402,
557558-557650
Length = 184
Score = 33.1 bits (72), Expect = 0.46
Identities = 32/155 (20%), Positives = 65/155 (41%), Gaps = 3/155 (1%)
Query: 275 TSHEDDKLEAIVETNEIIDTAAANVTECKLSSNFLVTXXXXXXXXXXCETASTAASDSEP 334
T+ ++KLE + ++ ++AAN T + ++ + + ST++S P
Sbjct: 10 TTALEEKLELL---RDVTKSSAANETSILVDASKYIKELKDKVSQEPEQLGSTSSSMPMP 66
Query: 335 TSLPSLPQEDKVAEETGDRIGNYSNEVNHVPIGEKNGFRRRSTYPPLSASILSNFEENFE 394
+ +K + G V+ V + +K GFR + +L++ E FE
Sbjct: 67 RLIEHKMCREKKHNAVLNTYGCMQVSVSSVELEKKIGFRINVSMEKSQPELLTSVLEAFE 126
Query: 395 SLIDNLTDADSLTSSTETEVFKSVGDSDSACSDES 429
L ++ DAD + +++G S S ++ S
Sbjct: 127 ELGLDVLDADVSCADDTAFRLEALGSSQSEAAETS 161
>01_03_0003 + 11509530-11512772
Length = 1080
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 413 EVFKSVGDSDSACSDESGYSEFLDGKESIIGNTIM 447
E + S+ S C+D SGYSE +DG S N+ +
Sbjct: 963 ECWVSINHSQINCTDTSGYSEIVDGNGSECPNSTL 997
>02_04_0115 -
19888252-19888406,19888507-19888573,19888867-19889101,
19889179-19889255,19889350-19889415,19889517-19889565,
19889651-19889701,19889799-19889851,19889973-19890024,
19890126-19890214,19890308-19890393,19890603-19890659,
19890742-19890919,19891852-19891908,19892209-19892439
Length = 500
Score = 30.7 bits (66), Expect = 2.5
Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Query: 375 RSTYPPLSASILSNFEENFESLIDNLTDAD--SLTSSTETEVFKSVGDSDSACSDESGYS 432
RST P+ ++S F+E FE L T + ++ TEVF + CS+
Sbjct: 337 RSTMGPIDVYLVSQFDEKFEDLGGGATPSGHANVPKHQPTEVFNTTNAGVGQCSNSVAVD 396
Query: 433 EFLDGKESI 441
+ ++I
Sbjct: 397 NNIQHSQTI 405
>12_01_0069 +
598704-598784,599161-599277,600681-600872,601004-601018
Length = 134
Score = 29.9 bits (64), Expect = 4.3
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 343 EDKVAEETGDRIGNYSNE-------VNHVPIGEKNGFRRRSTYPPLSASILSNFEENFES 395
+DKV++E +++G+ S+ V+ V + +K GFR + +L++ E FE
Sbjct: 45 KDKVSQEP-EQLGSTSSSMPMPRVSVSSVELEKKRGFRINVSMEKSQPELLTSVLEAFEE 103
Query: 396 LIDNLTDADSLTSSTETEVFKSVGDSDS 423
L ++ DAD + F++ G S S
Sbjct: 104 LGLDVLDADVSCADDTAFRFEAFGSSQS 131
>04_04_0648 -
26936123-26936447,26936540-26936841,26937043-26937915,
26937995-26938108,26938285-26938612,26938719-26938843,
26938926-26938991,26939099-26939166,26939262-26939343,
26939433-26939546,26939647-26939747,26940429-26940678
Length = 915
Score = 29.5 bits (63), Expect = 5.7
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 92 KLKHELRCHAVLCTKESISKKITEELQVKLKQALVEFKKERISKQNARLSLANSVYDN 149
+L+ ELRC A + ES+ K+ +++ K+++ + E K +R Q+ L V DN
Sbjct: 351 RLESELRCPASYSSLESLVKEKDNQIR-KMEKEIKELKLQRDLAQSRLQDLLQVVGDN 407
>01_06_0645 +
30826267-30826307,30826403-30826454,30826580-30826659,
30826804-30826882,30826962-30827045,30827131-30827276,
30827362-30827628,30827825-30827907,30828162-30828271,
30828544-30829159,30829471-30829620,30829700-30829800
Length = 602
Score = 29.5 bits (63), Expect = 5.7
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 375 RSTYPPLSASILSNFEENFESLIDNLTDADSLTSSTETEV 414
+S PL A+ +S+ ++ + L+ ADS TS TE V
Sbjct: 299 QSANAPLEAATVSHTQDKIDLFAGRLSSADSFTSDTEFSV 338
>11_01_0055 +
421459-421620,422356-422697,422934-423051,423132-423355,
423711-424127
Length = 420
Score = 29.1 bits (62), Expect = 7.6
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 101 AVLCTKESISKKITEELQVKLKQALVEFKKERISKQNARLSLANSVYDNPSMPR 154
AVLCT++S + I+ +L LK L + ERI R+ ++ D P +PR
Sbjct: 182 AVLCTRDSKDRPISVQLTTDLKPNLPS-EAERILNSKGRVF---AMDDEPDVPR 231
>10_05_0056 +
8635567-8635782,8636275-8637006,8637088-8637531,
8637618-8637665,8637706-8638505,8638584-8638754,
8638837-8639125,8639211-8639249,8639355-8639393
Length = 925
Score = 29.1 bits (62), Expect = 7.6
Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Query: 82 FCWVYRHE-GKKLKHELRCHAVLCTKESISKKITEELQVKLKQALVEFKKERISKQNARL 140
+ W Y+ K + + R A + +ESI ++T E KL+ + +KE +Q
Sbjct: 367 YAWQYKKRTSNKAEKDARLEAKI--RESIRAELTSEFDEKLESMRAKIRKEIREEQQNPQ 424
Query: 141 SLANSVYDNPSMPRRK 156
+ A + ++ P +K
Sbjct: 425 AAAATTHEELGSPTQK 440
>08_02_1382 +
26565137-26565210,26565330-26565468,26565489-26565603,
26565761-26565828,26565907-26566551,26566927-26567031,
26567115-26567465
Length = 498
Score = 29.1 bits (62), Expect = 7.6
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 144 NSVYDNPSMPRRKILLSVGSMNYRPPLERS 173
N +YD + R ++ L GS+++R P ERS
Sbjct: 119 NKLYDGQVIDRIELSLGAGSLSFRAPPERS 148
>01_01_0245 +
2013821-2014171,2014278-2014671,2015158-2015289,
2015747-2015788,2016096-2017057
Length = 626
Score = 29.1 bits (62), Expect = 7.6
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 4/31 (12%)
Query: 84 WVYRHEGKKLKHELRCHAVLCTKESISKKIT 114
W+Y H K +L+ H V C E I++KIT
Sbjct: 582 WIYDHLAK----DLQSHEVTCENEEIARKIT 608
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.311 0.127 0.364
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,767,037
Number of Sequences: 37544
Number of extensions: 428819
Number of successful extensions: 957
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 952
Number of HSP's gapped (non-prelim): 12
length of query: 448
length of database: 14,793,348
effective HSP length: 84
effective length of query: 364
effective length of database: 11,639,652
effective search space: 4236833328
effective search space used: 4236833328
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 61 (28.7 bits)
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