Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002166-TA|BGIBMGA002166-PA|undefined
(210 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9A874 Cluster: Uronate isomerase; n=33; Proteobacteria... 38 0.24
UniRef50_Q82B93 Cluster: Putative uncharacterized protein; n=1; ... 34 2.9
UniRef50_Q7XQJ7 Cluster: OSJNBa0017B10.11 protein; n=11; Oryza s... 34 2.9
UniRef50_UPI000065DD5D Cluster: Homolog of Homo sapiens "protein... 33 5.1
UniRef50_O52813 Cluster: PCZA361.12; n=1; Amycolatopsis oriental... 33 5.1
UniRef50_A7FDI9 Cluster: Transcriptional regulator, Fis family; ... 33 5.1
UniRef50_A1IAD3 Cluster: Putative uncharacterized protein; n=1; ... 33 5.1
UniRef50_UPI00006CC0B5 Cluster: hypothetical protein TTHERM_0021... 33 6.8
UniRef50_Q0LM81 Cluster: Putative uncharacterized protein precur... 33 6.8
UniRef50_A4M7L3 Cluster: Sensor protein; n=1; Petrotoga mobilis ... 32 9.0
>UniRef50_Q9A874 Cluster: Uronate isomerase; n=33;
Proteobacteria|Rep: Uronate isomerase - Caulobacter
crescentus (Caulobacter vibrioides)
Length = 487
Score = 37.5 bits (83), Expect = 0.24
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 7/82 (8%)
Query: 86 PTHRASWSYGTQLHCLITPLQFIAAHDRIINAWGHTSPAWQARHARNIQAQSRLTADFEQ 145
P+ A+ SY L+ L+ L I+ H GHT P+W A +A A L A
Sbjct: 14 PSDPATRSYARGLYALVKDLPIISPH-------GHTDPSWFATNAPFQDATDLLLAPDHY 66
Query: 146 HWRQSRSIQLSFDSLQISSSTG 167
+R S +S D+L++ S G
Sbjct: 67 LFRMLYSQGVSLDALKVRSKAG 88
>UniRef50_Q82B93 Cluster: Putative uncharacterized protein; n=1;
Streptomyces avermitilis|Rep: Putative uncharacterized
protein - Streptomyces avermitilis
Length = 226
Score = 33.9 bits (74), Expect = 2.9
Identities = 12/50 (24%), Positives = 26/50 (52%)
Query: 105 LQFIAAHDRIINAWGHTSPAWQARHARNIQAQSRLTADFEQHWRQSRSIQ 154
L F + R+ +A H +P W+ARH ++ + R+ + R++ ++
Sbjct: 150 LMFFGMYGRVGSALPHDNPYWRARHPEQVEREQRMRTSSVESLRRAHDVR 199
>UniRef50_Q7XQJ7 Cluster: OSJNBa0017B10.11 protein; n=11; Oryza sativa
(japonica cultivar-group)|Rep: OSJNBa0017B10.11 protein -
Oryza sativa subsp. japonica (Rice)
Length = 1814
Score = 33.9 bits (74), Expect = 2.9
Identities = 24/89 (26%), Positives = 37/89 (41%), Gaps = 1/89 (1%)
Query: 5 RLRHFQDKAHIYKFRTTTFGPSVYRAISPARWKIFPLSLSYPKLRIKNFGYHNPRILADK 64
+LRH+ + + G ++ R + + LS L + + LAD
Sbjct: 1213 KLRHYFQAHRVTVVTSYPLGQILHNREGTGRVVKWAIELSEFDLHFEPRHAIKSQALADF 1272
Query: 65 SMSLTVVPQQASIA-ASTGPSQPTHRASW 92
T P+ S+ AS+GPSQP H A W
Sbjct: 1273 VAEWTPAPEPVSVPEASSGPSQPPHTAHW 1301
>UniRef50_UPI000065DD5D Cluster: Homolog of Homo sapiens "protein
tyrosine phosphatase, non-receptor type 13 isoform 2;
n=1; Takifugu rubripes|Rep: Homolog of Homo sapiens
"protein tyrosine phosphatase, non-receptor type 13
isoform 2 - Takifugu rubripes
Length = 2538
Score = 33.1 bits (72), Expect = 5.1
Identities = 36/126 (28%), Positives = 49/126 (38%), Gaps = 10/126 (7%)
Query: 83 PSQPTHRASWSYGTQLHCLITPLQFIAAHDRIINAWGHTSPAWQARHARNIQAQSRLTAD 142
P P HR + SY QLH +PL A+ + H + Q +S +
Sbjct: 1054 PESPEHRVAKSYQGQLH---SPLSQAPANQVASHFQQHQRASSDTNSLLLQQEKSGTVTN 1110
Query: 143 FEQHWRQSRSIQLSFDSLQISSSTGDTHAAFKLSLDSLQASSSIGPCKLISARTTLTKND 202
W SRS + S SSST D+ A+ +DS + S P T K D
Sbjct: 1111 SSPVWNLSRSNKES-----DSSSTEDSGQAY--VVDSFKKKLSALPSPEREITTVNLKKD 1163
Query: 203 TTFSLG 208
T + LG
Sbjct: 1164 TKYGLG 1169
>UniRef50_O52813 Cluster: PCZA361.12; n=1; Amycolatopsis
orientalis|Rep: PCZA361.12 - Amycolatopsis orientalis
Length = 508
Score = 33.1 bits (72), Expect = 5.1
Identities = 25/86 (29%), Positives = 34/86 (39%), Gaps = 2/86 (2%)
Query: 88 HRASWSYGTQLHCLIT-PLQFIAAHDRIINAWGHTSPAWQARHARNIQAQSRLTADFEQH 146
+R +WS L T P I +I+ W +TSPAW+A A R T+ +
Sbjct: 166 YREAWSTPEVRWLLSTVPTSMILDDHEVIDDW-NTSPAWRAHMAEKPWWAERETSALMSY 224
Query: 147 WRQSRSIQLSFDSLQISSSTGDTHAA 172
W L D L + G AA
Sbjct: 225 WVYQHLGNLHPDELATDPTYGKVRAA 250
>UniRef50_A7FDI9 Cluster: Transcriptional regulator, Fis family;
n=8; Enterobacteriaceae|Rep: Transcriptional regulator,
Fis family - Yersinia pseudotuberculosis IP 31758
Length = 265
Score = 33.1 bits (72), Expect = 5.1
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 9/84 (10%)
Query: 128 RHARN-IQAQSRLTADFEQH---WRQSRSIQLSFDSLQISSSTGDTHAAFKLS-----LD 178
+H N +Q +L + F Q +++ R + D L +S ST DTHA +S +D
Sbjct: 156 QHRLNKLQEMDQLRSQFNQIRTVFKEQRQREKQLDELLVSLSTSDTHALPGISQDYSKID 215
Query: 179 SLQASSSIGPCKLISARTTLTKND 202
SL + C +++ R L ND
Sbjct: 216 SLTTAVETFECAVLTQRQRLYGND 239
>UniRef50_A1IAD3 Cluster: Putative uncharacterized protein; n=1;
Candidatus Desulfococcus oleovorans Hxd3|Rep: Putative
uncharacterized protein - Candidatus Desulfococcus
oleovorans Hxd3
Length = 12749
Score = 33.1 bits (72), Expect = 5.1
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 152 SIQLSFDSLQISSSTGD-THAAFKLSLD---SLQASSSIGPCKLISARTTLTKNDTTFSL 207
++ +DS + S+ GD A F +LD S+ SSI C +SA + + ND+T
Sbjct: 2593 AVSFVYDSNETSARIGDGDDATFDGALDAGGSVLVISSIASCPYVSANASASNNDSTQPS 2652
Query: 208 GGE 210
GG+
Sbjct: 2653 GGK 2655
>UniRef50_UPI00006CC0B5 Cluster: hypothetical protein TTHERM_00218240;
n=1; Tetrahymena thermophila SB210|Rep: hypothetical
protein TTHERM_00218240 - Tetrahymena thermophila SB210
Length = 1403
Score = 32.7 bits (71), Expect = 6.8
Identities = 16/63 (25%), Positives = 35/63 (55%)
Query: 143 FEQHWRQSRSIQLSFDSLQISSSTGDTHAAFKLSLDSLQASSSIGPCKLISARTTLTKND 202
F++ +S+ IQL FD Q S + + + + K SL+S Q ++++ +I+++ +D
Sbjct: 1337 FQESASKSKMIQLDFDMNQSYSKSQNLNGSLKKSLNSSQRATALNSNNIINSKNLKIDDD 1396
Query: 203 TTF 205
+
Sbjct: 1397 NKY 1399
>UniRef50_Q0LM81 Cluster: Putative uncharacterized protein
precursor; n=1; Herpetosiphon aurantiacus ATCC
23779|Rep: Putative uncharacterized protein precursor -
Herpetosiphon aurantiacus ATCC 23779
Length = 471
Score = 32.7 bits (71), Expect = 6.8
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Query: 125 WQARHARNIQAQSRLTADFEQHWRQSRSIQLSFDSLQISSSTGDTHAAFKLSLDSLQASS 184
WQA +Q + L D W ++ L + + ISS+ T+ KL L + Q S
Sbjct: 272 WQAGQLYRLQFEQPLLLDERLIWAENNEAALVYHTQSISSTLQQTY-ELKLDLKTQQVSL 330
Query: 185 SIGPCKLISARTTLTKNDTTFSL 207
S I+ T+ +N +++L
Sbjct: 331 SNTSTAWIAPPATVARNGYSWNL 353
>UniRef50_A4M7L3 Cluster: Sensor protein; n=1; Petrotoga mobilis
SJ95|Rep: Sensor protein - Petrotoga mobilis SJ95
Length = 452
Score = 32.3 bits (70), Expect = 9.0
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Query: 99 HCLITPLQFIAAHDRIINAWGHTSPAWQARHARNIQAQSRLTADF-EQHWRQSRS-IQLS 156
H L TPL I + +++ WG P +I+A S D EQ +++ Q+
Sbjct: 248 HELRTPLTSINGYIKMLKRWGKNDPKIMEESLNSIEASSEYLRDLVEQLLLLTKNDYQIK 307
Query: 157 FDSLQISSSTGDTHAAFKLSLD 178
+++ I + +T FKL L+
Sbjct: 308 KENIDIKNVVKETLNLFKLELN 329
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.319 0.129 0.395
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 231,125,816
Number of Sequences: 1657284
Number of extensions: 8475909
Number of successful extensions: 19653
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 19649
Number of HSP's gapped (non-prelim): 11
length of query: 210
length of database: 575,637,011
effective HSP length: 97
effective length of query: 113
effective length of database: 414,880,463
effective search space: 46881492319
effective search space used: 46881492319
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 70 (32.3 bits)
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