GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002166-TA|BGIBMGA002166-PA|undefined
         (210 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   2.9  
CR954257-9|CAJ14160.1|  573|Anopheles gambiae putative esterase ...    24   3.9  
CR954257-3|CAJ14154.1|  277|Anopheles gambiae predicted protein ...    23   6.7  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   6.7  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 9/12 (75%), Positives = 10/12 (83%)

Query: 78  AASTGPSQPTHR 89
           AA+TGP  PTHR
Sbjct: 913 AAATGPPPPTHR 924


>CR954257-9|CAJ14160.1|  573|Anopheles gambiae putative esterase
           protein.
          Length = 573

 Score = 23.8 bits (49), Expect = 3.9
 Identities = 9/24 (37%), Positives = 15/24 (62%)

Query: 135 AQSRLTADFEQHWRQSRSIQLSFD 158
           A S+++  F +H+ QSR +  S D
Sbjct: 389 ASSQISGAFREHYWQSRPLDASLD 412


>CR954257-3|CAJ14154.1|  277|Anopheles gambiae predicted protein
           protein.
          Length = 277

 Score = 23.0 bits (47), Expect = 6.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)

Query: 125 WQARHARNIQAQSRLT 140
           WQ +HA+  + Q RLT
Sbjct: 236 WQRQHAKQTEYQCRLT 251


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.0 bits (47), Expect = 6.7
 Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 6/53 (11%)

Query: 66   MSLTVVPQQASIAASTGPSQPTHRASWSYGTQL------HCLITPLQFIAAHD 112
            +SL+VVP+ A++  +   ++       SY T         C+ TP  F+  +D
Sbjct: 1012 LSLSVVPRDANVQNAVSTTKSLSGGERSYATVAFLIALWSCVSTPFFFLDEYD 1064


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.129    0.395 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,584
Number of Sequences: 2123
Number of extensions: 7665
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 10
Number of HSP's gapped (non-prelim): 4
length of query: 210
length of database: 516,269
effective HSP length: 61
effective length of query: 149
effective length of database: 386,766
effective search space: 57628134
effective search space used: 57628134
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 46 (22.6 bits)