Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002166-TA|BGIBMGA002166-PA|undefined
(210 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z47356-8|CAD27185.1| 477|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z47075-8|CAA87381.2| 477|Caenorhabditis elegans Hypothetical pr... 30 1.1
AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical... 30 1.1
Z92811-3|CAB07274.1| 1083|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z92789-9|CAB07223.1| 1083|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z81077-15|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical p... 28 4.3
Z75952-6|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical pr... 28 4.3
AF038619-3|AAO91713.1| 126|Caenorhabditis elegans Hypothetical ... 28 4.3
AF003151-4|AAK18918.2| 142|Caenorhabditis elegans Hypothetical ... 28 4.3
AF003151-3|ABJ99067.1| 247|Caenorhabditis elegans Hypothetical ... 28 4.3
U29097-8|AAA68415.1| 341|Caenorhabditis elegans Serpentine rece... 27 7.5
Z54270-5|CAA91031.1| 1302|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z54270-4|CAA91030.1| 1767|Caenorhabditis elegans Hypothetical pr... 27 9.9
>Z47356-8|CAD27185.1| 477|Caenorhabditis elegans Hypothetical
protein E02H1.7 protein.
Length = 477
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/54 (22%), Positives = 25/54 (46%)
Query: 98 LHCLITPLQFIAAHDRIINAWGHTSPAWQARHARNIQAQSRLTADFEQHWRQSR 151
+HCLI + A I + W T+ R+ ++ +++ ++ WRQ +
Sbjct: 299 VHCLILEHGYYTAQANIDDVWLITNGTCMPRNVEKLEEGCKISVSADRRWRQEK 352
>Z47075-8|CAA87381.2| 477|Caenorhabditis elegans Hypothetical
protein E02H1.7 protein.
Length = 477
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/54 (22%), Positives = 25/54 (46%)
Query: 98 LHCLITPLQFIAAHDRIINAWGHTSPAWQARHARNIQAQSRLTADFEQHWRQSR 151
+HCLI + A I + W T+ R+ ++ +++ ++ WRQ +
Sbjct: 299 VHCLILEHGYYTAQANIDDVWLITNGTCMPRNVEKLEEGCKISVSADRRWRQEK 352
>AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical
protein Y47G6A.17 protein.
Length = 1736
Score = 30.3 bits (65), Expect = 1.1
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 127 ARHARNIQAQSRLT-ADFEQHWRQSRS-IQLSFDSLQ--ISSST--GDTHAAFKLSLDSL 180
A RN+ Q +T A+ E W + ++ + L +SL+ I+S GD+ AF+ +DSL
Sbjct: 65 AEELRNVAEQEAVTMAEKEDQWEEQKTALNLEIESLRDRITSKADVGDSTEAFRAQIDSL 124
Query: 181 Q 181
+
Sbjct: 125 K 125
>Z92811-3|CAB07274.1| 1083|Caenorhabditis elegans Hypothetical protein
T01G1.3 protein.
Length = 1083
Score = 28.7 bits (61), Expect = 3.2
Identities = 29/133 (21%), Positives = 60/133 (45%), Gaps = 5/133 (3%)
Query: 54 GYHNPRILADKSMSLTVVPQQASIAASTGPSQPTHRASWSYGTQLHCLITPLQFIAAHDR 113
GY N ++ + +++ QQ+S A+S PS +++ + + P+Q ++
Sbjct: 926 GYQN--VMTNGIQGMSIHNQQSSAASSAFPSPNSYQQRPASAASV-VAPAPIQLSPEDEK 982
Query: 114 IINAWGHTSPAWQARHARNIQAQSRLTADFEQHWRQSRSIQLSFDSLQISSSTGDTHAAF 173
II +T +AR IQA+ D + S +L+ + L S TH A+
Sbjct: 983 IIEPI-NTLAQCIIENAR-IQARMEKAQDLRTRIQAELSPRLAANRLSPESKQHLTHMAY 1040
Query: 174 KLSLDSLQASSSI 186
+S+ ++ + ++
Sbjct: 1041 FVSMRQIREAQAV 1053
>Z92789-9|CAB07223.1| 1083|Caenorhabditis elegans Hypothetical protein
T01G1.3 protein.
Length = 1083
Score = 28.7 bits (61), Expect = 3.2
Identities = 29/133 (21%), Positives = 60/133 (45%), Gaps = 5/133 (3%)
Query: 54 GYHNPRILADKSMSLTVVPQQASIAASTGPSQPTHRASWSYGTQLHCLITPLQFIAAHDR 113
GY N ++ + +++ QQ+S A+S PS +++ + + P+Q ++
Sbjct: 926 GYQN--VMTNGIQGMSIHNQQSSAASSAFPSPNSYQQRPASAASV-VAPAPIQLSPEDEK 982
Query: 114 IINAWGHTSPAWQARHARNIQAQSRLTADFEQHWRQSRSIQLSFDSLQISSSTGDTHAAF 173
II +T +AR IQA+ D + S +L+ + L S TH A+
Sbjct: 983 IIEPI-NTLAQCIIENAR-IQARMEKAQDLRTRIQAELSPRLAANRLSPESKQHLTHMAY 1040
Query: 174 KLSLDSLQASSSI 186
+S+ ++ + ++
Sbjct: 1041 FVSMRQIREAQAV 1053
>Z81077-15|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical
protein F36A2.13 protein.
Length = 2944
Score = 28.3 bits (60), Expect = 4.3
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Query: 35 RWKIFPLSLSYPKLRIKNF---GYHNPRILADKS 65
R K FPL+L+ P+ IKNF G ++L D S
Sbjct: 2511 RLKTFPLNLAAPRFDIKNFTGEGNWTKKVLQDSS 2544
>Z75952-6|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical protein
F36A2.13 protein.
Length = 2944
Score = 28.3 bits (60), Expect = 4.3
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Query: 35 RWKIFPLSLSYPKLRIKNF---GYHNPRILADKS 65
R K FPL+L+ P+ IKNF G ++L D S
Sbjct: 2511 RLKTFPLNLAAPRFDIKNFTGEGNWTKKVLQDSS 2544
>AF038619-3|AAO91713.1| 126|Caenorhabditis elegans Hypothetical
protein F56A11.7 protein.
Length = 126
Score = 28.3 bits (60), Expect = 4.3
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 62 ADKSMSLTVVPQQASIAASTGPSQPTHRASWSYGTQLH 99
A+ ++LT V Q +++ G ++ HR WS GTQLH
Sbjct: 49 ANYFLTLTCVLQDLYLSSCHG-NEYGHRDLWSVGTQLH 85
>AF003151-4|AAK18918.2| 142|Caenorhabditis elegans Hypothetical
protein D1007.13a protein.
Length = 142
Score = 28.3 bits (60), Expect = 4.3
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 72 PQQASIAASTGPSQPTHRASWSYGTQLHCLITPLQFIAAHDRIINAWGHTSP 123
P + +ST S P +S +YG+ + P F + ++WG T P
Sbjct: 15 PSSPASTSSTAYSPPPATSSTTYGSSIPSTYPPSTFAPSAYPTSSSWGSTHP 66
>AF003151-3|ABJ99067.1| 247|Caenorhabditis elegans Hypothetical
protein D1007.13b protein.
Length = 247
Score = 28.3 bits (60), Expect = 4.3
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 72 PQQASIAASTGPSQPTHRASWSYGTQLHCLITPLQFIAAHDRIINAWGHTSP 123
P + +ST S P +S +YG+ + P F + ++WG T P
Sbjct: 120 PSSPASTSSTAYSPPPATSSTTYGSSIPSTYPPSTFAPSAYPTSSSWGSTHP 171
>U29097-8|AAA68415.1| 341|Caenorhabditis elegans Serpentine
receptor, class a (alpha)protein 28 protein.
Length = 341
Score = 27.5 bits (58), Expect = 7.5
Identities = 19/54 (35%), Positives = 26/54 (48%)
Query: 152 SIQLSFDSLQISSSTGDTHAAFKLSLDSLQASSSIGPCKLISARTTLTKNDTTF 205
SI L + L IS TG T++ F L L L I + I + KN+T+F
Sbjct: 267 SIPLEWFHLIISYLTGLTYSNFLLPLIILYQDKQIAKKRRIMIQRLQNKNETSF 320
>Z54270-5|CAA91031.1| 1302|Caenorhabditis elegans Hypothetical
protein F11C1.5b protein.
Length = 1302
Score = 27.1 bits (57), Expect = 9.9
Identities = 17/66 (25%), Positives = 26/66 (39%)
Query: 3 ESRLRHFQDKAHIYKFRTTTFGPSVYRAISPARWKIFPLSLSYPKLRIKNFGYHNPRILA 62
E+ L + Y +T P + A+ KI+ + SY I NF Y +L+
Sbjct: 209 ETNLNDLISVVYAYNSEASTSRPRIGTAVVENTLKIWNENPSYSAGEIVNFSYPAKEVLS 268
Query: 63 DKSMSL 68
D L
Sbjct: 269 DSEKDL 274
>Z54270-4|CAA91030.1| 1767|Caenorhabditis elegans Hypothetical
protein F11C1.5a protein.
Length = 1767
Score = 27.1 bits (57), Expect = 9.9
Identities = 17/66 (25%), Positives = 26/66 (39%)
Query: 3 ESRLRHFQDKAHIYKFRTTTFGPSVYRAISPARWKIFPLSLSYPKLRIKNFGYHNPRILA 62
E+ L + Y +T P + A+ KI+ + SY I NF Y +L+
Sbjct: 209 ETNLNDLISVVYAYNSEASTSRPRIGTAVVENTLKIWNENPSYSAGEIVNFSYPAKEVLS 268
Query: 63 DKSMSL 68
D L
Sbjct: 269 DSEKDL 274
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.319 0.129 0.395
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,017,939
Number of Sequences: 27539
Number of extensions: 185230
Number of successful extensions: 369
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 362
Number of HSP's gapped (non-prelim): 13
length of query: 210
length of database: 12,573,161
effective HSP length: 78
effective length of query: 132
effective length of database: 10,425,119
effective search space: 1376115708
effective search space used: 1376115708
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 57 (27.1 bits)
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