GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002165-TA|BGIBMGA002165-PA|undefined
         (246 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    24   1.2  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    23   1.6  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    23   1.6  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   5.0  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   6.6  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/27 (40%), Positives = 13/27 (48%)

Query: 9   CIETAAKTQSDRSQDAEKTLSDCKPNG 35
           C  +A+   SDRS     T  D KP G
Sbjct: 931 CRNSASPASSDRSGTPRSTNGDRKPGG 957


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 12/19 (63%), Positives = 15/19 (78%), Gaps = 1/19 (5%)

Query: 68  ILKNRSSSETSILLRNPSL 86
           +LKNR S ET+ LLRN S+
Sbjct: 120 VLKNRDSHETN-LLRNVSV 137


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 12/19 (63%), Positives = 15/19 (78%), Gaps = 1/19 (5%)

Query: 68  ILKNRSSSETSILLRNPSL 86
           +LKNR S ET+ LLRN S+
Sbjct: 120 VLKNRDSHETN-LLRNVSV 137


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/15 (46%), Positives = 10/15 (66%)

Query: 20  RSQDAEKTLSDCKPN 34
           + Q+ E  + DCKPN
Sbjct: 215 QGQNCELNVDDCKPN 229


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 9/35 (25%), Positives = 18/35 (51%)

Query: 134 KESNGLFKKNCNVYSVHQAKTLTPERKKSIPLMMP 168
           K++ G  ++  N+Y+  +A   +P      P+M P
Sbjct: 289 KKNIGKAQEEANLYAAKKAAGASPYSGTPTPMMSP 323


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.313    0.129    0.365 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,268
Number of Sequences: 317
Number of extensions: 1786
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 246
length of database: 114,650
effective HSP length: 55
effective length of query: 191
effective length of database: 97,215
effective search space: 18568065
effective search space used: 18568065
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 42 (21.0 bits)