GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002165-TA|BGIBMGA002165-PA|undefined
         (246 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    25   2.7  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    25   2.7  

>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 3/72 (4%)

Query: 178 GKSILPAEVC--LAEGLSGKDFTARAIGRLS-RGIGKLLRRSNSVRISEPDPVYKVAYLG 234
           G +ILP E C  L    + ++ TA  I  LS       L +S  +R+     +  V+ LG
Sbjct: 134 GDTILPREECDRLNISYAFENGTALEIPGLSCYEHAPTLSKSGVIRVIVLSAMAIVSLLG 193

Query: 235 NVLTGWARGKSK 246
           NV T W   K++
Sbjct: 194 NVATMWNIQKNR 205


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 3/72 (4%)

Query: 178 GKSILPAEVC--LAEGLSGKDFTARAIGRLS-RGIGKLLRRSNSVRISEPDPVYKVAYLG 234
           G +ILP E C  L    + ++ TA  I  LS       L +S  +R+     +  V+ LG
Sbjct: 135 GATILPREECDRLNISYAFENGTALEIPGLSCYEHAPTLSKSGVIRVIVLSAMAIVSLLG 194

Query: 235 NVLTGWARGKSK 246
           NV T W   K++
Sbjct: 195 NVATMWNIQKNR 206


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.313    0.129    0.365 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,548
Number of Sequences: 2123
Number of extensions: 7929
Number of successful extensions: 13
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 13
Number of HSP's gapped (non-prelim): 2
length of query: 246
length of database: 516,269
effective HSP length: 62
effective length of query: 184
effective length of database: 384,643
effective search space: 70774312
effective search space used: 70774312
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 47 (23.0 bits)