BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002165-TA|BGIBMGA002165-PA|undefined
(246 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC064989-1|AAH64989.1| 423|Homo sapiens family with sequence si... 36 0.17
BC039689-1|AAH39689.1| 423|Homo sapiens family with sequence si... 36 0.17
AK074503-1|BAC11027.1| 423|Homo sapiens protein ( Homo sapiens ... 36 0.17
AL391357-7|CAH73473.1| 329|Homo sapiens family with sequence si... 33 1.2
AK126900-1|BAC86742.1| 329|Homo sapiens (EC 3.1.4.17). protein. 33 1.2
BC128541-1|AAI28542.1| 489|Homo sapiens MAP9 protein protein. 32 2.1
BC128540-1|AAI28541.1| 488|Homo sapiens MAP9 protein protein. 32 2.1
AY690636-1|AAW02921.1| 647|Homo sapiens ASAP protein. 32 2.1
BC035589-1|AAH35589.1| 1832|Homo sapiens zinc finger protein 646... 31 2.8
AK024730-1|BAB14978.1| 435|Homo sapiens protein ( Homo sapiens ... 31 2.8
AB002294-1|BAA20756.2| 1838|Homo sapiens KIAA0296 protein. 31 2.8
BC119679-1|AAI19680.1| 311|Homo sapiens TBN protein protein. 31 4.9
BC119678-1|AAI19679.1| 311|Homo sapiens TBN protein protein. 31 4.9
AL513008-2|CAI15203.1| 311|Homo sapiens protein ( Human DNA seq... 31 4.9
AL512274-2|CAI16782.1| 311|Homo sapiens protein ( Human DNA seq... 31 4.9
AF465841-1|AAP47094.1| 310|Homo sapiens TBP-associated factor T... 31 4.9
>BC064989-1|AAH64989.1| 423|Homo sapiens family with sequence
similarity 43, member A protein.
Length = 423
Score = 35.5 bits (78), Expect = 0.17
Identities = 29/77 (37%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Query: 170 LLAHKPAEGKSILPAEVCLAEGLSGKDFTARAI--GRLSRGIGKLLR-RSNSVRISEPDP 226
LLA P S P ++ S ARA G LSR +G + R + + I+ DP
Sbjct: 11 LLAEAPPRQAS-KPKGYAVSLHYSALSSLARACPEGALSR-VGSMFRSKRKKLHITSEDP 68
Query: 227 VYKVAYLGNVLTGWARG 243
Y V YLGN T ARG
Sbjct: 69 TYTVLYLGNATTIQARG 85
>BC039689-1|AAH39689.1| 423|Homo sapiens family with sequence
similarity 43, member A protein.
Length = 423
Score = 35.5 bits (78), Expect = 0.17
Identities = 29/77 (37%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Query: 170 LLAHKPAEGKSILPAEVCLAEGLSGKDFTARAI--GRLSRGIGKLLR-RSNSVRISEPDP 226
LLA P S P ++ S ARA G LSR +G + R + + I+ DP
Sbjct: 11 LLAEAPPRQAS-KPKGYAVSLHYSALSSLARACPEGALSR-VGSMFRSKRKKLHITSEDP 68
Query: 227 VYKVAYLGNVLTGWARG 243
Y V YLGN T ARG
Sbjct: 69 TYTVLYLGNATTIQARG 85
>AK074503-1|BAC11027.1| 423|Homo sapiens protein ( Homo sapiens
cDNA FLJ90022 fis, clone HEMBA1000907. ).
Length = 423
Score = 35.5 bits (78), Expect = 0.17
Identities = 29/77 (37%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Query: 170 LLAHKPAEGKSILPAEVCLAEGLSGKDFTARAI--GRLSRGIGKLLR-RSNSVRISEPDP 226
LLA P S P ++ S ARA G LSR +G + R + + I+ DP
Sbjct: 11 LLAEAPPRQAS-KPKGYAVSLHYSALSSLARACPEGALSR-VGSMFRSKRKKLHITSEDP 68
Query: 227 VYKVAYLGNVLTGWARG 243
Y V YLGN T ARG
Sbjct: 69 TYTVLYLGNATTIQARG 85
>AL391357-7|CAH73473.1| 329|Homo sapiens family with sequence
similarity 43, member B protein.
Length = 329
Score = 32.7 bits (71), Expect = 1.2
Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 209 IGKLLR-RSNSVRISEPDPVYKVAYLGNVLTGWARG 243
+G++ R R V +++ DP Y V YLGN +T A+G
Sbjct: 52 LGRVFRSRRQKVELNKEDPTYTVWYLGNAVTLHAKG 87
>AK126900-1|BAC86742.1| 329|Homo sapiens (EC 3.1.4.17). protein.
Length = 329
Score = 32.7 bits (71), Expect = 1.2
Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 209 IGKLLR-RSNSVRISEPDPVYKVAYLGNVLTGWARG 243
+G++ R R V +++ DP Y V YLGN +T A+G
Sbjct: 52 LGRVFRSRRQKVELNKEDPTYTVWYLGNAVTLHAKG 87
>BC128541-1|AAI28542.1| 489|Homo sapiens MAP9 protein protein.
Length = 489
Score = 31.9 bits (69), Expect = 2.1
Identities = 36/169 (21%), Positives = 64/169 (37%), Gaps = 14/169 (8%)
Query: 4 ENERNCIETAAKTQS-DRSQDAEKTLSDCKPNGLRVRFLDEEGKT-ERTVSADE---VDC 58
EN+ N T + ++S++++ T D + + + ++ +T + +S + +
Sbjct: 284 ENKENSFSADHVTTAVEKSKESQVTADDLEEEKAKAELIMDDDRTVDPLLSKSQSILIST 343
Query: 59 SVTRVKKVHI----LKNRSS-----SETSILLRNPSLLKRRSSEHRLVDCHTDXXXXXXX 109
S T K I +KN+ S S S L LK+ SS+ R T
Sbjct: 344 SATASSKKTIEDRNIKNKKSTNNRASSASARLMTSEFLKKSSSKRRTPSTTTSSHYLGTL 403
Query: 110 XXXXXXXXXXGKVEPSDADGGEQTKESNGLFKKNCNVYSVHQAKTLTPE 158
+EP AD L KKN ++ +H+ K + E
Sbjct: 404 KVLDQKPSQKQSIEPDRADNIRAAVYQEWLEKKNVYLHEMHRIKRIESE 452
>BC128540-1|AAI28541.1| 488|Homo sapiens MAP9 protein protein.
Length = 488
Score = 31.9 bits (69), Expect = 2.1
Identities = 36/169 (21%), Positives = 64/169 (37%), Gaps = 14/169 (8%)
Query: 4 ENERNCIETAAKTQS-DRSQDAEKTLSDCKPNGLRVRFLDEEGKT-ERTVSADE---VDC 58
EN+ N T + ++S++++ T D + + + ++ +T + +S + +
Sbjct: 283 ENKENSFSADHVTTAVEKSKESQVTADDLEEEKAKAELIMDDDRTVDPLLSKSQSILIST 342
Query: 59 SVTRVKKVHI----LKNRSS-----SETSILLRNPSLLKRRSSEHRLVDCHTDXXXXXXX 109
S T K I +KN+ S S S L LK+ SS+ R T
Sbjct: 343 SATASSKKTIEDRNIKNKKSTNNRASSASARLMTSEFLKKSSSKRRTPSTTTSSHYLGTL 402
Query: 110 XXXXXXXXXXGKVEPSDADGGEQTKESNGLFKKNCNVYSVHQAKTLTPE 158
+EP AD L KKN ++ +H+ K + E
Sbjct: 403 KVLDQKPSQKQSIEPDRADNIRAAVYQEWLEKKNVYLHEMHRIKRIESE 451
>AY690636-1|AAW02921.1| 647|Homo sapiens ASAP protein.
Length = 647
Score = 31.9 bits (69), Expect = 2.1
Identities = 36/169 (21%), Positives = 64/169 (37%), Gaps = 14/169 (8%)
Query: 4 ENERNCIETAAKTQS-DRSQDAEKTLSDCKPNGLRVRFLDEEGKT-ERTVSADE---VDC 58
EN+ N T + ++S++++ T D + + + ++ +T + +S + +
Sbjct: 284 ENKENSFSADHVTTAVEKSKESQVTADDLEEEKAKAELIMDDDRTVDPLLSKSQSILIST 343
Query: 59 SVTRVKKVHI----LKNRSS-----SETSILLRNPSLLKRRSSEHRLVDCHTDXXXXXXX 109
S T K I +KN+ S S S L LK+ SS+ R T
Sbjct: 344 SATASSKKTIEDRNIKNKKSTNNRASSASARLMTSEFLKKSSSKRRTPSTTTSSHYLGTL 403
Query: 110 XXXXXXXXXXGKVEPSDADGGEQTKESNGLFKKNCNVYSVHQAKTLTPE 158
+EP AD L KKN ++ +H+ K + E
Sbjct: 404 KVLDQKPSQKQSIEPDRADNIRAAVYQEWLEKKNVYLHEMHRIKRIESE 452
>BC035589-1|AAH35589.1| 1832|Homo sapiens zinc finger protein 646
protein.
Length = 1832
Score = 31.5 bits (68), Expect = 2.8
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 6/82 (7%)
Query: 127 ADGGEQTKESNGLFK-KNCNVYSVHQAKTLTPERKKSIPLMMPRLLAHKPAEGKSILPAE 185
+D G + GL + C+ ++Q +L P+ S+P + H+P E S P
Sbjct: 824 SDCGHSFPHATGLLSHRPCHPPGIYQC-SLCPKEFDSLPALRSHFQNHRPGEATSAQPFL 882
Query: 186 VCLAEGLSGKDFTARAIGRLSR 207
CL G F RA RL R
Sbjct: 883 CCLC----GMIFPGRAGYRLHR 900
>AK024730-1|BAB14978.1| 435|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21077 fis, clone CAS02152. ).
Length = 435
Score = 31.5 bits (68), Expect = 2.8
Identities = 36/169 (21%), Positives = 64/169 (37%), Gaps = 14/169 (8%)
Query: 4 ENERNCIETAAKTQS-DRSQDAEKTLSDCKPNGLRVRFLDEEGKT-ERTVSADE---VDC 58
EN+ N T + ++S++++ T D + + + ++ +T + +S + +
Sbjct: 139 ENKENSFSADHVTTAVEKSKESQVTADDLEEEKAKAELIMDDDRTVDPLLSKSQSILIST 198
Query: 59 SVTRVKKVHI----LKNRSS-----SETSILLRNPSLLKRRSSEHRLVDCHTDXXXXXXX 109
S T K I +KN+ S S S L LK+ SS+ R T
Sbjct: 199 SATASSKKTIEDRNIKNKKSTNNRASSASARLMTSEFLKKSSSKRRTPSTTTSSHYLGTL 258
Query: 110 XXXXXXXXXXGKVEPSDADGGEQTKESNGLFKKNCNVYSVHQAKTLTPE 158
+EP AD L KKN ++ +H+ K + E
Sbjct: 259 KVLDQKPSQKQSIEPDRADNIRAAVYQEWLEKKNVYLHEMHRIKRIGSE 307
>AB002294-1|BAA20756.2| 1838|Homo sapiens KIAA0296 protein.
Length = 1838
Score = 31.5 bits (68), Expect = 2.8
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 6/82 (7%)
Query: 127 ADGGEQTKESNGLFK-KNCNVYSVHQAKTLTPERKKSIPLMMPRLLAHKPAEGKSILPAE 185
+D G + GL + C+ ++Q +L P+ S+P + H+P E S P
Sbjct: 833 SDCGHSFPHATGLLSHRPCHPPGIYQC-SLCPKEFDSLPALRSHFQNHRPGEATSAQPFL 891
Query: 186 VCLAEGLSGKDFTARAIGRLSR 207
CL G F RA RL R
Sbjct: 892 CCLC----GMIFPGRAGYRLHR 909
>BC119679-1|AAI19680.1| 311|Homo sapiens TBN protein protein.
Length = 311
Score = 30.7 bits (66), Expect = 4.9
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 43 EEGKTERTVSADEVDCSVTRVKKVHILKNRSSSE---TSILLRNPSLLKRRSSEHRLVD 98
E + E T S+++ + + T +HI S +E TS+L +NPSL R+ E ++D
Sbjct: 233 EMQQMEETDSSEQDEQTDTENLALHISMEDSGAEKENTSVLQQNPSLSGSRNGEENIID 291
>BC119678-1|AAI19679.1| 311|Homo sapiens TBN protein protein.
Length = 311
Score = 30.7 bits (66), Expect = 4.9
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 43 EEGKTERTVSADEVDCSVTRVKKVHILKNRSSSE---TSILLRNPSLLKRRSSEHRLVD 98
E + E T S+++ + + T +HI S +E TS+L +NPSL R+ E ++D
Sbjct: 233 EMQQMEETDSSEQDEQTDTENLALHISMEDSGAEKENTSVLQQNPSLSGSRNGEENIID 291
>AL513008-2|CAI15203.1| 311|Homo sapiens protein ( Human DNA
sequence from clone RP11-533O20 on chromosome 6. ).
Length = 311
Score = 30.7 bits (66), Expect = 4.9
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 43 EEGKTERTVSADEVDCSVTRVKKVHILKNRSSSE---TSILLRNPSLLKRRSSEHRLVD 98
E + E T S+++ + + T +HI S +E TS+L +NPSL R+ E ++D
Sbjct: 233 EMQQMEETDSSEQDEQTDTENLALHISMEDSGAEKENTSVLQQNPSLSGSRNGEENIID 291
>AL512274-2|CAI16782.1| 311|Homo sapiens protein ( Human DNA
sequence from clone RP11-7K24 on chromosome 6. ).
Length = 311
Score = 30.7 bits (66), Expect = 4.9
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 43 EEGKTERTVSADEVDCSVTRVKKVHILKNRSSSE---TSILLRNPSLLKRRSSEHRLVD 98
E + E T S+++ + + T +HI S +E TS+L +NPSL R+ E ++D
Sbjct: 233 EMQQMEETDSSEQDEQTDTENLALHISMEDSGAEKENTSVLQQNPSLSGSRNGEENIID 291
>AF465841-1|AAP47094.1| 310|Homo sapiens TBP-associated factor
TAFII43 protein.
Length = 310
Score = 30.7 bits (66), Expect = 4.9
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 43 EEGKTERTVSADEVDCSVTRVKKVHILKNRSSSE---TSILLRNPSLLKRRSSEHRLVD 98
E + E T S+++ + + T +HI S +E TS+L +NPSL R+ E ++D
Sbjct: 233 EMQQMEETDSSEQDEQTDTENLALHISMEDSGAEKENTSVLQQNPSLSGSRNGEENIID 291
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.313 0.129 0.365
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,329,990
Number of Sequences: 224733
Number of extensions: 1172927
Number of successful extensions: 2157
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 2152
Number of HSP's gapped (non-prelim): 16
length of query: 246
length of database: 73,234,838
effective HSP length: 88
effective length of query: 158
effective length of database: 53,458,334
effective search space: 8446416772
effective search space used: 8446416772
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 64 (29.9 bits)
- SilkBase 1999-2023 -