Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002164-TA|BGIBMGA002164-PA|IPR001780|Ribosomal protein
L35Ae
(93 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P18077 Cluster: 60S ribosomal protein L35a; n=47; Eutel... 101 4e-21
UniRef50_UPI0001552EFF Cluster: PREDICTED: similar to ribosomal ... 98 3e-20
UniRef50_Q86E43 Cluster: Clone ZZZ247 mRNA sequence; n=4; Eukary... 98 3e-20
UniRef50_Q9VNB9 Cluster: CG2099-PA; n=21; Eukaryota|Rep: CG2099-... 97 5e-20
UniRef50_Q8I7D7 Cluster: Putative 60S ribosomal protein L35a; n=... 91 3e-18
UniRef50_Q0PXZ5 Cluster: Putative ribosomal protein L35Ae; n=1; ... 89 1e-17
UniRef50_Q8W1C9 Cluster: Ribosomal protein L35A; n=13; Eukaryota... 85 3e-16
UniRef50_P49180 Cluster: 60S ribosomal protein L35a; n=4; Eukary... 85 3e-16
UniRef50_Q5GAS3 Cluster: Rpl35A; n=1; Zea mays|Rep: Rpl35A - Zea... 82 2e-15
UniRef50_P41056 Cluster: 60S ribosomal protein L33-B; n=42; Euka... 73 1e-12
UniRef50_Q4WX73 Cluster: 60S ribosomal protein L35Ae; n=4; Peziz... 70 8e-12
UniRef50_Q4QHL3 Cluster: Ribosomal protein l35a, putative; n=6; ... 69 2e-11
UniRef50_Q5KFG9 Cluster: 60s ribosomal protein l33-b, putative; ... 67 6e-11
UniRef50_A4S1R2 Cluster: Ribosomal protein L35a, component of cy... 67 7e-11
UniRef50_A5K584 Cluster: 60S ribosomal protein L33-B, putative; ... 63 1e-09
UniRef50_Q55BN7 Cluster: Ribosomal protein L35a; n=1; Dictyostel... 56 2e-07
UniRef50_A0CFU8 Cluster: Chromosome undetermined scaffold_177, w... 55 2e-07
UniRef50_A2DSF3 Cluster: Ribosomal protein L35Ae, putative; n=4;... 54 6e-07
UniRef50_Q7QXX7 Cluster: GLP_479_47445_47074; n=1; Giardia lambl... 53 1e-06
UniRef50_A6R3W0 Cluster: Putative uncharacterized protein; n=2; ... 49 2e-05
UniRef50_UPI0000D9A2D5 Cluster: PREDICTED: similar to ribosomal ... 44 4e-04
UniRef50_Q9V1P2 Cluster: 50S ribosomal protein L35Ae; n=5; Therm... 40 0.013
UniRef50_Q8TYY6 Cluster: 50S ribosomal protein L35Ae; n=2; Archa... 40 0.013
UniRef50_UPI0000DA3A09 Cluster: PREDICTED: similar to ribosomal ... 38 0.051
UniRef50_Q8SSF3 Cluster: 60S RIBOSOMAL PROTEIN L35A; n=1; Enceph... 37 0.090
UniRef50_A1RX00 Cluster: Ribosomal protein L35Ae; n=1; Thermofil... 35 0.27
UniRef50_A2BL64 Cluster: 50S ribosomal protein L35Ae; n=2; Desul... 34 0.48
UniRef50_Q5QXQ3 Cluster: Uncharacterized conserved membrane prot... 32 2.5
UniRef50_A1ZQQ1 Cluster: Putative uncharacterized protein; n=1; ... 30 7.8
>UniRef50_P18077 Cluster: 60S ribosomal protein L35a; n=47;
Euteleostomi|Rep: 60S ribosomal protein L35a - Homo
sapiens (Human)
Length = 110
Score = 101 bits (241), Expect = 4e-21
Identities = 46/76 (60%), Positives = 54/76 (71%), Gaps = 3/76 (3%)
Query: 1 MMVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSV 60
+ +EG R++ FY GK C YVY+AK T PGG K K R IWGKVTR HGNSG V
Sbjct: 28 LKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPGG---KPNKTRVIWGKVTRAHGNSGMV 84
Query: 61 RAKFKSNLPAQAMGHR 76
RAKF+SNLPA+A+GHR
Sbjct: 85 RAKFRSNLPAKAIGHR 100
>UniRef50_UPI0001552EFF Cluster: PREDICTED: similar to ribosomal
protein L35a; n=7; Euarchontoglires|Rep: PREDICTED:
similar to ribosomal protein L35a - Mus musculus
Length = 86
Score = 97.9 bits (233), Expect = 3e-20
Identities = 45/76 (59%), Positives = 53/76 (69%), Gaps = 3/76 (3%)
Query: 1 MMVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSV 60
+ +EG R++ FY GK C YVY+AK T PGG K K R IWGKVTR HGNS V
Sbjct: 4 LKIEGVYARDETEFYLGKRCAYVYKAKNNTMTPGG---KLNKTRMIWGKVTRAHGNSSMV 60
Query: 61 RAKFKSNLPAQAMGHR 76
RAKF+SNLPA+A+GHR
Sbjct: 61 RAKFRSNLPAKAIGHR 76
>UniRef50_Q86E43 Cluster: Clone ZZZ247 mRNA sequence; n=4;
Eukaryota|Rep: Clone ZZZ247 mRNA sequence - Schistosoma
japonicum (Blood fluke)
Length = 128
Score = 97.9 bits (233), Expect = 3e-20
Identities = 44/76 (57%), Positives = 53/76 (69%), Gaps = 2/76 (2%)
Query: 1 MMVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSV 60
+ ++G +R FY GK CVYVYRA+K+ P R K TK+R IWGK+ RPHGNSG V
Sbjct: 45 LRIDGVTERKSTEFYLGKRCVYVYRAEKKKVFPR--RQKPTKIRVIWGKIMRPHGNSGIV 102
Query: 61 RAKFKSNLPAQAMGHR 76
RA+FK NLPA AMG R
Sbjct: 103 RARFKHNLPASAMGKR 118
>UniRef50_Q9VNB9 Cluster: CG2099-PA; n=21; Eukaryota|Rep: CG2099-PA
- Drosophila melanogaster (Fruit fly)
Length = 157
Score = 97.5 bits (232), Expect = 5e-20
Identities = 41/76 (53%), Positives = 56/76 (73%), Gaps = 1/76 (1%)
Query: 1 MMVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSV 60
+ +EGA+ + FY GK CVYVY+A+ + +P P +KT++RA+WGKVTR HGN+G+V
Sbjct: 73 LKIEGARRKEHGSFYVGKRCVYVYKAETKKCVPQHPE-RKTRVRAVWGKVTRIHGNTGAV 131
Query: 61 RAKFKSNLPAQAMGHR 76
RA+F NLP AMGHR
Sbjct: 132 RARFNRNLPGHAMGHR 147
>UniRef50_Q8I7D7 Cluster: Putative 60S ribosomal protein L35a;
n=1; Ciona intestinalis|Rep: Putative 60S ribosomal
protein L35a - Ciona intestinalis (Transparent sea
squirt)
Length = 122
Score = 91.5 bits (217), Expect = 3e-18
Identities = 41/73 (56%), Positives = 52/73 (71%), Gaps = 3/73 (4%)
Query: 1 MMVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSV 60
+ +EG ++ D FY GK C YVY+AK++T P RG+ K R IWGKVTR HGNSG V
Sbjct: 28 LRIEGVTNKEDTDFYLGKKCAYVYKAKRKTKTP---RGEPNKTRVIWGKVTRSHGNSGVV 84
Query: 61 RAKFKSNLPAQAM 73
RA FK+NLPA+A+
Sbjct: 85 RATFKTNLPAKAI 97
>UniRef50_Q0PXZ5 Cluster: Putative ribosomal protein L35Ae; n=1;
Diaphorina citri|Rep: Putative ribosomal protein L35Ae -
Diaphorina citri (Asian citrus psyllid)
Length = 172
Score = 89.4 bits (212), Expect = 1e-17
Identities = 42/76 (55%), Positives = 53/76 (69%), Gaps = 2/76 (2%)
Query: 1 MMVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSV 60
+ +E + DA FY GK CV++Y+AK + P R K++LRAIWGKVTRPHG+SGSV
Sbjct: 89 LAIEKCNTKEDARFYVGKRCVFLYKAKTKELKPHSKR--KSRLRAIWGKVTRPHGSSGSV 146
Query: 61 RAKFKSNLPAQAMGHR 76
RAKF NLPA MG +
Sbjct: 147 RAKFHRNLPAIYMGRK 162
>UniRef50_Q8W1C9 Cluster: Ribosomal protein L35A; n=13;
Eukaryota|Rep: Ribosomal protein L35A - Zea mays (Maize)
Length = 112
Score = 85.0 bits (201), Expect = 3e-16
Identities = 38/76 (50%), Positives = 51/76 (67%), Gaps = 8/76 (10%)
Query: 1 MMVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSV 60
+ +EG + D +YAGK Y+Y+AK ++ +T+ R IWGKVTRPHGNSG V
Sbjct: 35 VQIEGVNTKEDVAWYAGKRMAYIYKAKTKS--------SETRYRCIWGKVTRPHGNSGVV 86
Query: 61 RAKFKSNLPAQAMGHR 76
RAKFKSNLP ++MG +
Sbjct: 87 RAKFKSNLPPESMGRK 102
>UniRef50_P49180 Cluster: 60S ribosomal protein L35a; n=4;
Eukaryota|Rep: 60S ribosomal protein L35a -
Caenorhabditis elegans
Length = 124
Score = 84.6 bits (200), Expect = 3e-16
Identities = 39/76 (51%), Positives = 52/76 (68%), Gaps = 2/76 (2%)
Query: 1 MMVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSV 60
+ +EG ++ DA FYAGK VY+Y+A +T G T+ RAIWGK+TRPHGN+G+V
Sbjct: 41 LKLEGVFNKEDAGFYAGKRVVYLYKAHNKTLKTG--HTVATRTRAIWGKITRPHGNAGAV 98
Query: 61 RAKFKSNLPAQAMGHR 76
RAKF N+P A+G R
Sbjct: 99 RAKFHHNIPPSALGKR 114
>UniRef50_Q5GAS3 Cluster: Rpl35A; n=1; Zea mays|Rep: Rpl35A - Zea
mays (Maize)
Length = 139
Score = 81.8 bits (193), Expect = 2e-15
Identities = 37/73 (50%), Positives = 49/73 (67%), Gaps = 8/73 (10%)
Query: 1 MMVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSV 60
+ +EG + D +YAGK Y+Y+AK ++ +T+ R IWGKVTRPHGNSG V
Sbjct: 55 VQIEGVNTKEDVAWYAGKRMAYIYKAKTKS--------SETRYRCIWGKVTRPHGNSGVV 106
Query: 61 RAKFKSNLPAQAM 73
RAKFKSNLP ++M
Sbjct: 107 RAKFKSNLPPESM 119
>UniRef50_P41056 Cluster: 60S ribosomal protein L33-B; n=42;
Eukaryota|Rep: 60S ribosomal protein L33-B -
Saccharomyces cerevisiae (Baker's yeast)
Length = 107
Score = 72.9 bits (171), Expect = 1e-12
Identities = 37/72 (51%), Positives = 45/72 (62%), Gaps = 8/72 (11%)
Query: 3 VEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRA 62
+EG +A FY GK YVYRA K RG +K+R +WGKVTR HGNSG VRA
Sbjct: 32 IEGVATPQEAQFYLGKRIAYVYRASKEV------RG--SKIRVMWGKVTRTHGNSGVVRA 83
Query: 63 KFKSNLPAQAMG 74
F++NLPA+ G
Sbjct: 84 TFRNNLPAKTFG 95
>UniRef50_Q4WX73 Cluster: 60S ribosomal protein L35Ae; n=4;
Pezizomycotina|Rep: 60S ribosomal protein L35Ae -
Aspergillus fumigatus (Sartorya fumigata)
Length = 119
Score = 70.1 bits (164), Expect = 8e-12
Identities = 35/72 (48%), Positives = 45/72 (62%), Gaps = 8/72 (11%)
Query: 3 VEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRA 62
++G A FY GK +VYRAK+ RG + +R IWGKVTRPHGNSG VRA
Sbjct: 44 IDGVDSTEAANFYLGKKVAFVYRAKREV------RG--SNIRVIWGKVTRPHGNSGVVRA 95
Query: 63 KFKSNLPAQAMG 74
+F+ NLP ++ G
Sbjct: 96 QFRHNLPPKSFG 107
>UniRef50_Q4QHL3 Cluster: Ribosomal protein l35a, putative; n=6;
Trypanosomatidae|Rep: Ribosomal protein l35a, putative -
Leishmania major
Length = 144
Score = 68.9 bits (161), Expect = 2e-11
Identities = 34/77 (44%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 3 VEGAKDRNDAVFYAGKHCVYVYRAKK--RTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSV 60
VE R DA +Y GK YVY KK R +++ RA+WG+VTRPHGN+G +
Sbjct: 58 VENVNTREDATWYVGKRVCYVYHGKKVKRCVRWSKAPARRSTTRALWGRVTRPHGNAGMM 117
Query: 61 RAKFK-SNLPAQAMGHR 76
R KF +++PA A+G R
Sbjct: 118 RVKFNGASVPASAIGRR 134
>UniRef50_Q5KFG9 Cluster: 60s ribosomal protein l33-b, putative;
n=2; Filobasidiella neoformans|Rep: 60s ribosomal
protein l33-b, putative - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 178
Score = 67.3 bits (157), Expect = 6e-11
Identities = 31/74 (41%), Positives = 49/74 (66%), Gaps = 8/74 (10%)
Query: 1 MMVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSV 60
+ +EG ++ A Y GK YVY+AK+ I G +++R IWG+++R HGNSG+V
Sbjct: 101 LQIEGVDNKEAAGHYLGKRVAYVYKAKRE--ING------SRVRVIWGRISRSHGNSGAV 152
Query: 61 RAKFKSNLPAQAMG 74
++KF++NLPA+ G
Sbjct: 153 KSKFRTNLPAKTFG 166
>UniRef50_A4S1R2 Cluster: Ribosomal protein L35a, component of
cytosolic 80S ribosome and 60S large subunit; n=1;
Ostreococcus lucimarinus CCE9901|Rep: Ribosomal protein
L35a, component of cytosolic 80S ribosome and 60S large
subunit - Ostreococcus lucimarinus CCE9901
Length = 109
Score = 66.9 bits (156), Expect = 7e-11
Identities = 34/72 (47%), Positives = 42/72 (58%), Gaps = 8/72 (11%)
Query: 3 VEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRA 62
+EG D FY GK YVY+AK + + T R IWGKV R HG SG VRA
Sbjct: 34 LEGVSDAPSTAFYGGKKLCYVYKAKTKK--------QGTAYRTIWGKVMRAHGTSGVVRA 85
Query: 63 KFKSNLPAQAMG 74
KFKS+LP+ ++G
Sbjct: 86 KFKSHLPSNSIG 97
>UniRef50_A5K584 Cluster: 60S ribosomal protein L33-B, putative;
n=5; Plasmodium|Rep: 60S ribosomal protein L33-B,
putative - Plasmodium vivax
Length = 146
Score = 62.9 bits (146), Expect = 1e-09
Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 8/74 (10%)
Query: 3 VEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRA 62
+ + A FY GK YVYR K K++ IWGKV R HGNSG +RA
Sbjct: 71 IRNVHTKKHAQFYVGKKIAYVYRTNKHHD--------GVKIKCIWGKVCRTHGNSGVIRA 122
Query: 63 KFKSNLPAQAMGHR 76
+F++N+P +A G R
Sbjct: 123 RFRTNIPPKAFGDR 136
>UniRef50_Q55BN7 Cluster: Ribosomal protein L35a; n=1;
Dictyostelium discoideum AX4|Rep: Ribosomal protein
L35a - Dictyostelium discoideum AX4
Length = 105
Score = 55.6 bits (128), Expect = 2e-07
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 3 VEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRA 62
+EG R D+ FY GK V + K P G K WGK+ + HG+SG V+A
Sbjct: 29 IEGVVSREDSTFYLGKKVCLVSKVSKSAK---NPTGHKIS----WGKICKTHGSSGVVQA 81
Query: 63 KFKSNLPAQAMG 74
+F NLP +AMG
Sbjct: 82 RFARNLPPKAMG 93
>UniRef50_A0CFU8 Cluster: Chromosome undetermined scaffold_177,
whole genome shotgun sequence; n=9; Eukaryota|Rep:
Chromosome undetermined scaffold_177, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 129
Score = 55.2 bits (127), Expect = 2e-07
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
Query: 1 MMVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSV 60
+ +E D + FY GK Y+Y+A TK RAIWG++++ HG++G V
Sbjct: 52 LKIEHVNDVASSRFYWGKRVAYIYKAHSLK--------NNTKFRAIWGRISKSHGSNGVV 103
Query: 61 RAKFKSNLPAQAMG 74
A+F NLP +A+G
Sbjct: 104 TARFGRNLPPRAIG 117
>UniRef50_A2DSF3 Cluster: Ribosomal protein L35Ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein L35Ae,
putative - Trichomonas vaginalis G3
Length = 102
Score = 54.0 bits (124), Expect = 6e-07
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 13/72 (18%)
Query: 3 VEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRA 62
++G + +A FYAGK V++ K+ I WG +T+PHGNSG VRA
Sbjct: 32 IQGVVSKEEAQFYAGKKVASVWKFDKQEFIN-------------WGVITQPHGNSGVVRA 78
Query: 63 KFKSNLPAQAMG 74
KF+ NLP Q +G
Sbjct: 79 KFEKNLPPQMLG 90
>UniRef50_Q7QXX7 Cluster: GLP_479_47445_47074; n=1; Giardia
lamblia ATCC 50803|Rep: GLP_479_47445_47074 - Giardia
lamblia ATCC 50803
Length = 123
Score = 53.2 bits (122), Expect = 1e-06
Identities = 21/33 (63%), Positives = 27/33 (81%)
Query: 44 RAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHR 76
+ I+GK+ RPHGNSG VRA+F +NLP Q MGH+
Sbjct: 59 KPIFGKICRPHGNSGMVRARFYTNLPGQLMGHK 91
>UniRef50_A6R3W0 Cluster: Putative uncharacterized protein; n=2;
Pezizomycotina|Rep: Putative uncharacterized protein -
Ajellomyces capsulatus NAm1
Length = 102
Score = 49.2 bits (112), Expect = 2e-05
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 12/72 (16%)
Query: 3 VEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSG---- 58
+EG +D A FY GK +VYRAK+ + +K+R IWGKVTR HG G
Sbjct: 34 LEGVEDIKAANFYLGKKVAFVYRAKREV--------QGSKIRVIWGKVTRTHGQLGRCPC 85
Query: 59 SVRAKFKSNLPA 70
+++ +F S P+
Sbjct: 86 AIQTQFFSQSPS 97
>UniRef50_UPI0000D9A2D5 Cluster: PREDICTED: similar to ribosomal
protein L35a; n=1; Macaca mulatta|Rep: PREDICTED:
similar to ribosomal protein L35a - Macaca mulatta
Length = 80
Score = 44.4 bits (100), Expect = 4e-04
Identities = 18/24 (75%), Positives = 22/24 (91%)
Query: 52 RPHGNSGSVRAKFKSNLPAQAMGH 75
+ HGNSG VRAKF+SNLPA+A+GH
Sbjct: 46 KAHGNSGMVRAKFQSNLPAKAIGH 69
>UniRef50_Q9V1P2 Cluster: 50S ribosomal protein L35Ae; n=5;
Thermococcaceae|Rep: 50S ribosomal protein L35Ae -
Pyrococcus abyssi
Length = 87
Score = 39.5 bits (88), Expect = 0.013
Identities = 15/27 (55%), Positives = 20/27 (74%)
Query: 48 GKVTRPHGNSGSVRAKFKSNLPAQAMG 74
GK+ R HG G+VRA+F+ LP QA+G
Sbjct: 55 GKIVRVHGTKGAVRARFEKGLPGQALG 81
>UniRef50_Q8TYY6 Cluster: 50S ribosomal protein L35Ae; n=2;
Archaea|Rep: 50S ribosomal protein L35Ae - Methanopyrus
kandleri
Length = 90
Score = 39.5 bits (88), Expect = 0.013
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 44 RAIWGKVTRPHGNSGSVRAKFKSNLPAQAMG 74
+ I GKV HGN+G+VR +F+ LP QA+G
Sbjct: 54 KVIRGKVVDTHGNNGAVRVRFERGLPGQALG 84
>UniRef50_UPI0000DA3A09 Cluster: PREDICTED: similar to ribosomal
protein L35a; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L35a - Rattus norvegicus
Length = 106
Score = 37.5 bits (83), Expect = 0.051
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Query: 4 EGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAK 63
EG R++ + K C YVY+AK PG GK K R + GK P +G AK
Sbjct: 51 EGVYARDETELHLAKRCAYVYKAKISAVTPG---GKTNKTRVVRGKQLGP--RNGLFCAK 105
Query: 64 F 64
F
Sbjct: 106 F 106
>UniRef50_Q8SSF3 Cluster: 60S RIBOSOMAL PROTEIN L35A; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN
L35A - Encephalitozoon cuniculi
Length = 113
Score = 36.7 bits (81), Expect = 0.090
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 46 IWGKVTRPHGNSGSVRAKFKSNLPAQAMG 74
+ G +TR HGNSG+VRA+F NL + +G
Sbjct: 70 VHGVITRIHGNSGAVRARFTRNLDPKLLG 98
>UniRef50_A1RX00 Cluster: Ribosomal protein L35Ae; n=1;
Thermofilum pendens Hrk 5|Rep: Ribosomal protein L35Ae
- Thermofilum pendens (strain Hrk 5)
Length = 85
Score = 35.1 bits (77), Expect = 0.27
Identities = 15/27 (55%), Positives = 18/27 (66%)
Query: 48 GKVTRPHGNSGSVRAKFKSNLPAQAMG 74
GK+ R HG G V A FK +LP QA+G
Sbjct: 53 GKIVRMHGRRGHVLAYFKRHLPGQAVG 79
>UniRef50_A2BL64 Cluster: 50S ribosomal protein L35Ae; n=2;
Desulfurococcales|Rep: 50S ribosomal protein L35Ae -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 106
Score = 34.3 bits (75), Expect = 0.48
Identities = 15/27 (55%), Positives = 17/27 (62%)
Query: 48 GKVTRPHGNSGSVRAKFKSNLPAQAMG 74
GK+ HG+ G V A FK NLP QA G
Sbjct: 61 GKIVHVHGSKGVVIAVFKPNLPGQARG 87
>UniRef50_Q5QXQ3 Cluster: Uncharacterized conserved membrane
protein; n=3; Gammaproteobacteria|Rep: Uncharacterized
conserved membrane protein - Idiomarina loihiensis
Length = 345
Score = 31.9 bits (69), Expect = 2.5
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Query: 27 KKRTPIPGGPRGKKTKLRA--IWGKVTRPHGNSGSVRAKFKSNLPAQAMG 74
KK P GP K+ K +WG+++ GN S+R K K+ A G
Sbjct: 261 KKLESQPAGPEEKERKNNPTYVWGEISDAKGNKKSMRVKVKNGYSLTAEG 310
>UniRef50_A1ZQQ1 Cluster: Putative uncharacterized protein; n=1;
Microscilla marina ATCC 23134|Rep: Putative
uncharacterized protein - Microscilla marina ATCC 23134
Length = 237
Score = 30.3 bits (65), Expect = 7.8
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 3 VEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVT 51
++G ++ +F AGK+ Y KK T R K T+ R + K T
Sbjct: 66 IDGGMRNSEFIFEAGKNVFYSIDTKKETITKNSLRAKSTRDRKVTAKKT 114
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.321 0.136 0.435
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,945,604
Number of Sequences: 1657284
Number of extensions: 3452036
Number of successful extensions: 5446
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 5399
Number of HSP's gapped (non-prelim): 30
length of query: 93
length of database: 575,637,011
effective HSP length: 71
effective length of query: 22
effective length of database: 457,969,847
effective search space: 10075336634
effective search space used: 10075336634
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 65 (30.3 bits)
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