Silkworm BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002163-TA|BGIBMGA002163-PA|IPR001304|C-type lectin
         (378 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    27   0.85 
X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.     27   1.1  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    25   2.6  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    25   4.5  
DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.     24   7.9  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   7.9  

>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 27.1 bits (57), Expect = 0.85
 Identities = 15/53 (28%), Positives = 20/53 (37%), Gaps = 2/53 (3%)

Query: 94  PSHYNEWQASXXXXXXXXKIVNRPPNPYK--DKFKPSYPPPSQNQPIPVHTPQ 144
           P ++N +  S            +PP PY       PSY  P Q    P+H  Q
Sbjct: 360 PHYWNRFTQSTAMHNQPPPPPYQPPQPYSLMASVAPSYGLPQQQNQCPIHRIQ 412


>X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.
          Length = 696

 Score = 26.6 bits (56), Expect = 1.1
 Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 2/34 (5%)

Query: 118 PNPYKDKFKPSYPPPSQN--QPIPVHTPQQPYAP 149
           PN     F+ + P PS    QP+P HT   P  P
Sbjct: 505 PNASVPMFETNLPGPSNGWVQPVPSHTQNGPSQP 538


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 25.4 bits (53), Expect = 2.6
 Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 4/46 (8%)

Query: 117 PPNPYKDKFKPSYPPPSQNQPIPVHTPQQPYAPGGLVDRVDETKPS 162
           PP+ Y+ +  P  PPP  N       P     P    DR  ++KPS
Sbjct: 630 PPSAYQQQQPPVVPPPRTNSQSQASEPTPALPP--RADR--DSKPS 671


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 24.6 bits (51), Expect = 4.5
 Identities = 10/23 (43%), Positives = 14/23 (60%)

Query: 315 CLALVHDPALHSYLYRGQDCALR 337
           CLA+  D  +HS    G +CA+R
Sbjct: 916 CLAIKEDTRVHSRRGTGLNCAIR 938


>DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.
          Length = 377

 Score = 23.8 bits (49), Expect = 7.9
 Identities = 10/27 (37%), Positives = 14/27 (51%)

Query: 122 KDKFKPSYPPPSQNQPIPVHTPQQPYA 148
           K  + PSYP  +  QP P +   +P A
Sbjct: 174 KPMYYPSYPTEANFQPHPYYPKYEPDA 200


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.8 bits (49), Expect = 7.9
 Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 4/46 (8%)

Query: 324  LHSYLYRGQDCALRHRYVCEKEEDNDKLGNEIERVAKKLREVKRKS 369
            + S LY+    ALR   +C +     +L NE  R+A+ +R++ R++
Sbjct: 2836 ISSSLYQATFLALRVLCICFET----RLSNEWPRIARVMRDLGRRN 2877


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.317    0.135    0.419 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 418,280
Number of Sequences: 2123
Number of extensions: 18382
Number of successful extensions: 85
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 82
Number of HSP's gapped (non-prelim): 6
length of query: 378
length of database: 516,269
effective HSP length: 65
effective length of query: 313
effective length of database: 378,274
effective search space: 118399762
effective search space used: 118399762
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 49 (23.8 bits)