GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002161-TA|BGIBMGA002161-PA|IPR001373|Cullin
         (691 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    27   0.51 
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    24   3.6  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    24   4.8  
DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex det...    23   6.3  
DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex det...    23   6.3  
DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex det...    23   6.3  
DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex det...    23   6.3  
DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex det...    23   6.3  
DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex det...    23   6.3  
DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex det...    23   6.3  
AY569719-1|AAS86672.1|  401|Apis mellifera complementary sex det...    23   6.3  
AY569718-1|AAS86671.1|  401|Apis mellifera complementary sex det...    23   6.3  
AY569715-1|AAS86668.1|  401|Apis mellifera complementary sex det...    23   6.3  
AY569714-1|AAS86667.1|  401|Apis mellifera complementary sex det...    23   6.3  
AY569713-1|AAS86666.1|  401|Apis mellifera complementary sex det...    23   6.3  
AY569711-1|AAS86664.1|  401|Apis mellifera complementary sex det...    23   6.3  
AY569702-1|AAS86655.1|  400|Apis mellifera complementary sex det...    23   6.3  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    23   6.3  

>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 27.1 bits (57), Expect = 0.51
 Identities = 9/28 (32%), Positives = 18/28 (64%)

Query: 584 PLTDVDDKLTAAIVVFKYIDDKDIFQKH 611
           PLT++++K    ++  K  D K+++Q H
Sbjct: 53  PLTNIEEKTYQCLLCQKAFDQKNLYQSH 80


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 10/19 (52%), Positives = 15/19 (78%)

Query: 42  RIKLGVDNRTQVAGVVGLK 60
           +I++GV +   VAG+VGLK
Sbjct: 516 QIRVGVHSGAVVAGIVGLK 534


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 14/56 (25%), Positives = 28/56 (50%), Gaps = 1/56 (1%)

Query: 43  IKLGVDNRTQVAGVVGLKAVDRIVWNTRFSDVYALCVAHPEPLADRLYDETRNFLE 98
           +K+G+++    AGV+G +     +W     +V +   +  +    ++ DETR  LE
Sbjct: 894 LKMGINHGPVTAGVIGARKPHYDIWGNTV-NVASRMESTGKVGCIQVTDETRKILE 948


>DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 87  DRLYDETRNFLEEHVASLLERVRGSTTLEQ 116
           DR YD+  N  E+H+     R R S + E+
Sbjct: 16  DRRYDQLHNVEEKHLRERTSRRRYSRSRER 45


>DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 87  DRLYDETRNFLEEHVASLLERVRGSTTLEQ 116
           DR YD+  N  E+H+     R R S + E+
Sbjct: 16  DRRYDQLHNVEEKHLRERTSRRRYSRSRER 45


>DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 87  DRLYDETRNFLEEHVASLLERVRGSTTLEQ 116
           DR YD+  N  E+H+     R R S + E+
Sbjct: 16  DRRYDQLHNVEEKHLRERTSRRRYSRSRER 45


>DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 87  DRLYDETRNFLEEHVASLLERVRGSTTLEQ 116
           DR YD+  N  E+H+     R R S + E+
Sbjct: 16  DRRYDQLHNVEEKHLRERTSRRRYSRSRER 45


>DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 87  DRLYDETRNFLEEHVASLLERVRGSTTLEQ 116
           DR YD+  N  E+H+     R R S + E+
Sbjct: 16  DRRYDQLHNVEEKHLRERTSRRRYSRSRER 45


>DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 87  DRLYDETRNFLEEHVASLLERVRGSTTLEQ 116
           DR YD+  N  E+H+     R R S + E+
Sbjct: 16  DRRYDQLHNVEEKHLRERTSRRRYSRSRER 45


>DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 87  DRLYDETRNFLEEHVASLLERVRGSTTLEQ 116
           DR YD+  N  E+H+     R R S + E+
Sbjct: 16  DRRYDQLHNVEEKHLRERTSRRRYSRSRER 45


>AY569719-1|AAS86672.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 87  DRLYDETRNFLEEHVASLLERVRGSTTLEQ 116
           DR YD+  N  E+H+     R R S + E+
Sbjct: 265 DRRYDQLHNVEEKHLRERTSRRRYSRSRER 294


>AY569718-1|AAS86671.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 87  DRLYDETRNFLEEHVASLLERVRGSTTLEQ 116
           DR YD+  N  E+H+     R R S + E+
Sbjct: 265 DRRYDQLHNVEEKHLRERTSRRRYSRSRER 294


>AY569715-1|AAS86668.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 87  DRLYDETRNFLEEHVASLLERVRGSTTLEQ 116
           DR YD+  N  E+H+     R R S + E+
Sbjct: 265 DRRYDQLHNVEEKHLRERTSRRRYSRSRER 294


>AY569714-1|AAS86667.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 87  DRLYDETRNFLEEHVASLLERVRGSTTLEQ 116
           DR YD+  N  E+H+     R R S + E+
Sbjct: 265 DRRYDQLHNVEEKHLRERTSRRRYSRSRER 294


>AY569713-1|AAS86666.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 87  DRLYDETRNFLEEHVASLLERVRGSTTLEQ 116
           DR YD+  N  E+H+     R R S + E+
Sbjct: 265 DRRYDQLHNVEEKHLRERTSRRRYSRSRER 294


>AY569711-1|AAS86664.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 87  DRLYDETRNFLEEHVASLLERVRGSTTLEQ 116
           DR YD+  N  E+H+     R R S + E+
Sbjct: 265 DRRYDQLHNVEEKHLRERTSRRRYSRSRER 294


>AY569702-1|AAS86655.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 87  DRLYDETRNFLEEHVASLLERVRGSTTLEQ 116
           DR YD+  N  E+H+     R R S + E+
Sbjct: 264 DRRYDQLHNVEEKHLRERTSRRRYSRSRER 293


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 87  DRLYDETRNFLEEHVASLLERVRGSTTLEQ 116
           DR YD+  N  E+H+     R R S + E+
Sbjct: 265 DRRYDQLHNVEEKHLRERTSRRRYSRSRER 294


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.321    0.133    0.390 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,732
Number of Sequences: 429
Number of extensions: 5818
Number of successful extensions: 29
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 12
Number of HSP's gapped (non-prelim): 18
length of query: 691
length of database: 140,377
effective HSP length: 62
effective length of query: 629
effective length of database: 113,779
effective search space: 71566991
effective search space used: 71566991
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 47 (23.0 bits)