GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002160-TA|BGIBMGA002160-PA|IPR013120|Male sterility
C-terminal
         (458 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    28   0.16 
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    22   7.8  

>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 27.9 bits (59), Expect = 0.16
 Identities = 19/84 (22%), Positives = 39/84 (46%), Gaps = 6/84 (7%)

Query: 370 FLIVVQNRFVYRLLEFVLQTAPLHVAECLRQTDGQKARYHNVPCVQLKVLVVQQRNRGRL 429
           F+++    FV+RL +   +   L  A        ++ RY +    QL VL+    N   +
Sbjct: 108 FIMLTSTAFVFRLKQLNAKVEMLKNARVKNTALWKQLRYEHYRLYQLSVLI--DNNMSYI 165

Query: 430 RLVHYTTIVFLVLL----SYKLIK 449
            +V + T ++ +++    S K++K
Sbjct: 166 IIVSFATNLYFIIIQLFGSMKIVK 189


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 22.2 bits (45), Expect = 7.8
 Identities = 13/34 (38%), Positives = 15/34 (44%)

Query: 146 LKFDEALRKAVDQNVRGLLSLVDVCDALPNLEAL 179
           L  D AL         GLLS  +VC  L N + L
Sbjct: 310 LSIDGALEAGPYSKEEGLLSYPEVCVKLANPQKL 343


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.325    0.139    0.422 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,203
Number of Sequences: 317
Number of extensions: 3853
Number of successful extensions: 14
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 12
Number of HSP's gapped (non-prelim): 2
length of query: 458
length of database: 114,650
effective HSP length: 59
effective length of query: 399
effective length of database: 95,947
effective search space: 38282853
effective search space used: 38282853
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 45 (22.2 bits)