Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002157-TA|BGIBMGA002157-PA|IPR000679|Zinc finger,
GATA-type
(595 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68221-5|CAJ30235.1| 416|Caenorhabditis elegans Hypothetical pr... 112 8e-25
Z68221-4|CAJ30234.1| 488|Caenorhabditis elegans Hypothetical pr... 112 8e-25
X57834-1|CAA40967.1| 416|Caenorhabditis elegans elt-1 protein. 112 8e-25
Z49867-3|CAA90029.2| 433|Caenorhabditis elegans Hypothetical pr... 55 1e-07
U25175-1|AAC36130.1| 433|Caenorhabditis elegans GATA-factor pro... 55 1e-07
Z50027-6|CAD44111.1| 72|Caenorhabditis elegans Hypothetical pr... 54 3e-07
AF353303-1|AAK32717.1| 367|Caenorhabditis elegans GATA-like tra... 51 2e-06
AF100657-1|AAC68957.3| 367|Caenorhabditis elegans Erythroid-lik... 51 2e-06
AY462219-1|AAR26006.1| 358|Caenorhabditis elegans GATA transcri... 50 5e-06
AF353302-1|AAK32716.1| 376|Caenorhabditis elegans GATA-like tra... 50 5e-06
AF067612-7|AAD36952.2| 376|Caenorhabditis elegans Egg laying de... 50 5e-06
AF068708-9|AAC17756.1| 198|Caenorhabditis elegans Hypothetical ... 49 8e-06
Z69663-3|CAA93510.2| 226|Caenorhabditis elegans Hypothetical pr... 48 2e-05
AF146517-1|AAD33964.1| 226|Caenorhabditis elegans GATA transcri... 48 2e-05
Z81555-1|CAB04516.1| 242|Caenorhabditis elegans Hypothetical pr... 46 8e-05
Z81555-3|CAB04513.1| 221|Caenorhabditis elegans Hypothetical pr... 46 1e-04
AF026555-1|AAB97516.1| 221|Caenorhabditis elegans GATA transcri... 46 1e-04
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 33 0.76
Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical pr... 33 0.76
U61288-1|AAB17543.1| 790|Caenorhabditis elegans CE protein. 33 0.76
Z68121-1|CAA92204.2| 174|Caenorhabditis elegans Hypothetical pr... 31 1.7
AF302237-1|AAG21385.1| 174|Caenorhabditis elegans GATA-type tra... 31 1.7
U00044-5|AAK93857.1| 174|Caenorhabditis elegans Mesoderm and en... 31 3.0
AF302238-1|AAG21386.1| 174|Caenorhabditis elegans GATA-type tra... 31 3.0
AF025460-2|AAF02169.3| 545|Caenorhabditis elegans Prion-like-(q... 31 3.0
Z66498-5|CAA91294.2| 513|Caenorhabditis elegans Hypothetical pr... 30 4.0
Z54327-14|CAA91124.2| 513|Caenorhabditis elegans Hypothetical p... 30 4.0
Z81045-5|CAB02815.1| 322|Caenorhabditis elegans Hypothetical pr... 29 7.0
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 29 9.3
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 29 9.3
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 29 9.3
U41546-6|AAC48223.1| 798|Caenorhabditis elegans Hypothetical pr... 29 9.3
>Z68221-5|CAJ30235.1| 416|Caenorhabditis elegans Hypothetical
protein W09C2.1b protein.
Length = 416
Score = 112 bits (269), Expect = 8e-25
Identities = 50/99 (50%), Positives = 60/99 (60%), Gaps = 6/99 (6%)
Query: 467 EVKECVNCAAATTPLWRRDGTGHYLCNACGLYTRINGVNRPPLKGQKAKPQQALPSNGNR 526
E +ECVNC TPLWRRDG+G+YLCNACGLY ++N RP +K +K + N +
Sbjct: 213 EDRECVNCGVHNTPLWRRDGSGNYLCNACGLYFKMNHHARPLVKPKKRQ------QNAQK 266
Query: 527 RMGVTCANCXXXXXXXXXXXXXGEPVCNACGLYFKLHNV 565
R G+ C NC G PVCNACGLYFKLH V
Sbjct: 267 RTGIECVNCRTNTTTLWRRNGEGHPVCNACGLYFKLHKV 305
Score = 64.5 bits (150), Expect = 2e-10
Identities = 30/61 (49%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 470 ECVNCAAATTPLWRRDGTGHYLCNACGLYTRINGVNRP-PLKGQKAKPQ-QALPSNGNRR 527
ECVNC TT LWRR+G GH +CNACGLY +++ V RP +K + + + L + G+RR
Sbjct: 271 ECVNCRTNTTTLWRRNGEGHPVCNACGLYFKLHKVERPITMKKDGIQTRNRKLSAKGSRR 330
Query: 528 M 528
M
Sbjct: 331 M 331
>Z68221-4|CAJ30234.1| 488|Caenorhabditis elegans Hypothetical
protein W09C2.1a protein.
Length = 488
Score = 112 bits (269), Expect = 8e-25
Identities = 50/99 (50%), Positives = 60/99 (60%), Gaps = 6/99 (6%)
Query: 467 EVKECVNCAAATTPLWRRDGTGHYLCNACGLYTRINGVNRPPLKGQKAKPQQALPSNGNR 526
E +ECVNC TPLWRRDG+G+YLCNACGLY ++N RP +K +K + N +
Sbjct: 285 EDRECVNCGVHNTPLWRRDGSGNYLCNACGLYFKMNHHARPLVKPKKRQ------QNAQK 338
Query: 527 RMGVTCANCXXXXXXXXXXXXXGEPVCNACGLYFKLHNV 565
R G+ C NC G PVCNACGLYFKLH V
Sbjct: 339 RTGIECVNCRTNTTTLWRRNGEGHPVCNACGLYFKLHKV 377
Score = 64.5 bits (150), Expect = 2e-10
Identities = 30/61 (49%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 470 ECVNCAAATTPLWRRDGTGHYLCNACGLYTRINGVNRP-PLKGQKAKPQ-QALPSNGNRR 527
ECVNC TT LWRR+G GH +CNACGLY +++ V RP +K + + + L + G+RR
Sbjct: 343 ECVNCRTNTTTLWRRNGEGHPVCNACGLYFKLHKVERPITMKKDGIQTRNRKLSAKGSRR 402
Query: 528 M 528
M
Sbjct: 403 M 403
>X57834-1|CAA40967.1| 416|Caenorhabditis elegans elt-1 protein.
Length = 416
Score = 112 bits (269), Expect = 8e-25
Identities = 50/99 (50%), Positives = 60/99 (60%), Gaps = 6/99 (6%)
Query: 467 EVKECVNCAAATTPLWRRDGTGHYLCNACGLYTRINGVNRPPLKGQKAKPQQALPSNGNR 526
E +ECVNC TPLWRRDG+G+YLCNACGLY ++N RP +K +K + N +
Sbjct: 213 EDRECVNCGVHNTPLWRRDGSGNYLCNACGLYFKMNHHARPLVKPKKRQ------QNAQK 266
Query: 527 RMGVTCANCXXXXXXXXXXXXXGEPVCNACGLYFKLHNV 565
R G+ C NC G PVCNACGLYFKLH V
Sbjct: 267 RTGIECVNCRTNTTTLWRRNGEGHPVCNACGLYFKLHKV 305
Score = 64.5 bits (150), Expect = 2e-10
Identities = 30/61 (49%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 470 ECVNCAAATTPLWRRDGTGHYLCNACGLYTRINGVNRP-PLKGQKAKPQ-QALPSNGNRR 527
ECVNC TT LWRR+G GH +CNACGLY +++ V RP +K + + + L + G+RR
Sbjct: 271 ECVNCRTNTTTLWRRNGEGHPVCNACGLYFKLHKVERPITMKKDGIQTRNRKLSAKGSRR 330
Query: 528 M 528
M
Sbjct: 331 M 331
>Z49867-3|CAA90029.2| 433|Caenorhabditis elegans Hypothetical
protein C33D3.1 protein.
Length = 433
Score = 55.2 bits (127), Expect = 1e-07
Identities = 23/46 (50%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 522 SNGN--RRMGVTCANCXXXXXXXXXXXXXGEPVCNACGLYFKLHNV 565
SNG+ RR G+ C+NC G+PVCNACGLYFKLH++
Sbjct: 225 SNGSASRRQGLVCSNCNGTNTTLWRRNAEGDPVCNACGLYFKLHHI 270
Score = 48.8 bits (111), Expect = 1e-05
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 471 CVNCAAATTPLWRRDGTGHYLCNACGLYTRINGVNRP 507
C NC T LWRR+ G +CNACGLY +++ + RP
Sbjct: 237 CSNCNGTNTTLWRRNAEGDPVCNACGLYFKLHHIPRP 273
>U25175-1|AAC36130.1| 433|Caenorhabditis elegans GATA-factor
protein.
Length = 433
Score = 55.2 bits (127), Expect = 1e-07
Identities = 23/46 (50%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 522 SNGN--RRMGVTCANCXXXXXXXXXXXXXGEPVCNACGLYFKLHNV 565
SNG+ RR G+ C+NC G+PVCNACGLYFKLH++
Sbjct: 225 SNGSASRRQGLVCSNCNGTNTTLWRRNAEGDPVCNACGLYFKLHHI 270
Score = 48.8 bits (111), Expect = 1e-05
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 471 CVNCAAATTPLWRRDGTGHYLCNACGLYTRINGVNRP 507
C NC T LWRR+ G +CNACGLY +++ + RP
Sbjct: 237 CSNCNGTNTTLWRRNAEGDPVCNACGLYFKLHHIPRP 273
>Z50027-6|CAD44111.1| 72|Caenorhabditis elegans Hypothetical
protein C39B10.6 protein.
Length = 72
Score = 54.0 bits (124), Expect = 3e-07
Identities = 26/55 (47%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 471 CVNCAAATTPLWRRDGTGHYLCNACGLYTRINGVNRP-PLKGQKAKPQQALPSNG 524
C NC T LWRR G +CNACGLY +++ V RP P+K K K LP+ G
Sbjct: 16 CSNCNGTNTTLWRRKAEGDPVCNACGLYFKLHHVTRPIPMK--KNKKHAVLPAPG 68
Score = 49.2 bits (112), Expect = 8e-06
Identities = 19/43 (44%), Positives = 25/43 (58%)
Query: 523 NGNRRMGVTCANCXXXXXXXXXXXXXGEPVCNACGLYFKLHNV 565
+ + R + C+NC G+PVCNACGLYFKLH+V
Sbjct: 7 DASHRKRLVCSNCNGTNTTLWRRKAEGDPVCNACGLYFKLHHV 49
>AF353303-1|AAK32717.1| 367|Caenorhabditis elegans GATA-like
transcription factorELT-6 protein.
Length = 367
Score = 51.2 bits (117), Expect = 2e-06
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 468 VKECVNCAAATTPLWRRDGTGHYLCNACGLYTRINGVNRP 507
+ +C NC+ T WRRD G +CNACGLY R++ +RP
Sbjct: 262 ISKCSNCSTIKTTAWRRDLEGKLVCNACGLYYRLHRTHRP 301
Score = 39.5 bits (88), Expect = 0.007
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 532 CANCXXXXXXXXXXXXXGEPVCNACGLYFKLHNVRHHCAH 571
C+NC G+ VCNACGLY++LH H H
Sbjct: 265 CSNCSTIKTTAWRRDLEGKLVCNACGLYYRLHRT-HRPVH 303
>AF100657-1|AAC68957.3| 367|Caenorhabditis elegans Erythroid-like
transcription factorfamily protein 6 protein.
Length = 367
Score = 51.2 bits (117), Expect = 2e-06
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 468 VKECVNCAAATTPLWRRDGTGHYLCNACGLYTRINGVNRP 507
+ +C NC+ T WRRD G +CNACGLY R++ +RP
Sbjct: 262 ISKCSNCSTIKTTAWRRDLEGKLVCNACGLYYRLHRTHRP 301
Score = 39.5 bits (88), Expect = 0.007
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 532 CANCXXXXXXXXXXXXXGEPVCNACGLYFKLHNVRHHCAH 571
C+NC G+ VCNACGLY++LH H H
Sbjct: 265 CSNCSTIKTTAWRRDLEGKLVCNACGLYYRLHRT-HRPVH 303
>AY462219-1|AAR26006.1| 358|Caenorhabditis elegans GATA
transcription factor EGL-18A protein.
Length = 358
Score = 50.0 bits (114), Expect = 5e-06
Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 417 GQSGGVEYVPVSGYEGGLLVEGYPAPT-QAWPAHNLLPIDDGFDPSMAGMGEVKECVNCA 475
GQ+ P S + ++E P+ Q+ + + DP+ A C NC
Sbjct: 217 GQATSTTSPPSSSSQVQAVIEAVATPSSQSQDSSMFEKTETSGDPNAA------RCSNCR 270
Query: 476 AATTPLWRRDGTGHYLCNACGLYTRINGVNRP 507
T WRRD G +CN CGLY R++ V RP
Sbjct: 271 TDKTTAWRRDAEGKLVCNPCGLYYRLHKVRRP 302
Score = 43.2 bits (97), Expect = 5e-04
Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 2/90 (2%)
Query: 501 INGVNRPPLKGQKAKPQQALPSNGNRRMGVTCANCXXXXXXXXXXXXXGEPVCNACGLYF 560
I V P + Q + + ++G+ C+NC G+ VCN CGLY+
Sbjct: 236 IEAVATPSSQSQDSSMFEKTETSGDPN-AARCSNCRTDKTTAWRRDAEGKLVCNPCGLYY 294
Query: 561 KLHNVRHHC-AHQPHLTNTELLMNEERSDS 589
+LH VR + H+ N+E+ S
Sbjct: 295 RLHKVRRPIEMRKNHIQQRYRRKNKEKESS 324
>AF353302-1|AAK32716.1| 376|Caenorhabditis elegans GATA-like
transcription factorELT-5 protein.
Length = 376
Score = 50.0 bits (114), Expect = 5e-06
Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 417 GQSGGVEYVPVSGYEGGLLVEGYPAPT-QAWPAHNLLPIDDGFDPSMAGMGEVKECVNCA 475
GQ+ P S + ++E P+ Q+ + + DP+ A C NC
Sbjct: 217 GQATSTTSPPSSSSQVQAVIEAVATPSSQSQDSSMFEKTETSGDPNAA------RCSNCR 270
Query: 476 AATTPLWRRDGTGHYLCNACGLYTRINGVNRP 507
T WRRD G +CN CGLY R++ V RP
Sbjct: 271 TDKTTAWRRDAEGKLVCNPCGLYYRLHKVRRP 302
Score = 43.2 bits (97), Expect = 5e-04
Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 2/90 (2%)
Query: 501 INGVNRPPLKGQKAKPQQALPSNGNRRMGVTCANCXXXXXXXXXXXXXGEPVCNACGLYF 560
I V P + Q + + ++G+ C+NC G+ VCN CGLY+
Sbjct: 236 IEAVATPSSQSQDSSMFEKTETSGDPN-AARCSNCRTDKTTAWRRDAEGKLVCNPCGLYY 294
Query: 561 KLHNVRHHC-AHQPHLTNTELLMNEERSDS 589
+LH VR + H+ N+E+ S
Sbjct: 295 RLHKVRRPIEMRKNHIQQRYRRKNKEKESS 324
>AF067612-7|AAD36952.2| 376|Caenorhabditis elegans Egg laying
defective protein 18 protein.
Length = 376
Score = 50.0 bits (114), Expect = 5e-06
Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 417 GQSGGVEYVPVSGYEGGLLVEGYPAPT-QAWPAHNLLPIDDGFDPSMAGMGEVKECVNCA 475
GQ+ P S + ++E P+ Q+ + + DP+ A C NC
Sbjct: 217 GQATSTTSPPSSSSQVQAVIEAVATPSSQSQDSSMFEKTETSGDPNAA------RCSNCR 270
Query: 476 AATTPLWRRDGTGHYLCNACGLYTRINGVNRP 507
T WRRD G +CN CGLY R++ V RP
Sbjct: 271 TDKTTAWRRDAEGKLVCNPCGLYYRLHKVRRP 302
Score = 43.2 bits (97), Expect = 5e-04
Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 2/90 (2%)
Query: 501 INGVNRPPLKGQKAKPQQALPSNGNRRMGVTCANCXXXXXXXXXXXXXGEPVCNACGLYF 560
I V P + Q + + ++G+ C+NC G+ VCN CGLY+
Sbjct: 236 IEAVATPSSQSQDSSMFEKTETSGDPN-AARCSNCRTDKTTAWRRDAEGKLVCNPCGLYY 294
Query: 561 KLHNVRHHC-AHQPHLTNTELLMNEERSDS 589
+LH VR + H+ N+E+ S
Sbjct: 295 RLHKVRRPIEMRKNHIQQRYRRKNKEKESS 324
>AF068708-9|AAC17756.1| 198|Caenorhabditis elegans Hypothetical
protein C18G1.2 protein.
Length = 198
Score = 49.2 bits (112), Expect = 8e-06
Identities = 23/46 (50%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 471 CVNCAAATTPLWRRDGTGHYLCNACGLYTRINGVNRPPLKGQKAKP 516
C +C+ TT LWR++ G+ CNAC LY R N V R PL K KP
Sbjct: 143 CSHCSTTTTTLWRKNDEGNLECNACNLYYRHNKVKR-PLSLCKQKP 187
>Z69663-3|CAA93510.2| 226|Caenorhabditis elegans Hypothetical
protein K02B9.4 protein.
Length = 226
Score = 47.6 bits (108), Expect = 2e-05
Identities = 20/37 (54%), Positives = 21/37 (56%)
Query: 471 CVNCAAATTPLWRRDGTGHYLCNACGLYTRINGVNRP 507
C NC T LWRR+G G CNAC LY R N RP
Sbjct: 153 CSNCKTRETTLWRRNGEGGVECNACNLYFRKNNRKRP 189
Score = 32.3 bits (70), Expect = 1.00
Identities = 19/69 (27%), Positives = 26/69 (37%), Gaps = 2/69 (2%)
Query: 498 YTRINGVNRPPLKGQKA--KPQQALPSNGNRRMGVTCANCXXXXXXXXXXXXXGEPVCNA 555
YT ++ PP A KP + + C+NC G CNA
Sbjct: 117 YTTMSNFTPPPQDPLVAEPKPMKKRMAAVQCHQNSICSNCKTRETTLWRRNGEGGVECNA 176
Query: 556 CGLYFKLHN 564
C LYF+ +N
Sbjct: 177 CNLYFRKNN 185
>AF146517-1|AAD33964.1| 226|Caenorhabditis elegans GATA
transcription factor ELT-3 protein.
Length = 226
Score = 47.6 bits (108), Expect = 2e-05
Identities = 20/37 (54%), Positives = 21/37 (56%)
Query: 471 CVNCAAATTPLWRRDGTGHYLCNACGLYTRINGVNRP 507
C NC T LWRR+G G CNAC LY R N RP
Sbjct: 153 CSNCKTRETTLWRRNGEGGVECNACNLYFRKNNRKRP 189
Score = 32.3 bits (70), Expect = 1.00
Identities = 19/69 (27%), Positives = 26/69 (37%), Gaps = 2/69 (2%)
Query: 498 YTRINGVNRPPLKGQKA--KPQQALPSNGNRRMGVTCANCXXXXXXXXXXXXXGEPVCNA 555
YT ++ PP A KP + + C+NC G CNA
Sbjct: 117 YTTMSNFTPPPQDPLVAEPKPMKKRMAAVQCHQNSICSNCKTRETTLWRRNGEGGVECNA 176
Query: 556 CGLYFKLHN 564
C LYF+ +N
Sbjct: 177 CNLYFRKNN 185
>Z81555-1|CAB04516.1| 242|Caenorhabditis elegans Hypothetical
protein F58E10.5 protein.
Length = 242
Score = 46.0 bits (104), Expect = 8e-05
Identities = 18/37 (48%), Positives = 20/37 (54%)
Query: 471 CVNCAAATTPLWRRDGTGHYLCNACGLYTRINGVNRP 507
C NC T LWRR+ G CN C LY R+ G RP
Sbjct: 179 CSNCGCRETKLWRRNEQGETECNPCNLYERVKGHKRP 215
>Z81555-3|CAB04513.1| 221|Caenorhabditis elegans Hypothetical
protein F58E10.2 protein.
Length = 221
Score = 45.6 bits (103), Expect = 1e-04
Identities = 21/48 (43%), Positives = 23/48 (47%)
Query: 460 PSMAGMGEVKECVNCAAATTPLWRRDGTGHYLCNACGLYTRINGVNRP 507
PS V NC T LWRR +G CN C LY R NG+ RP
Sbjct: 129 PSTFHTNSVCSNPNCRTRETTLWRRTDSGAIECNGCSLYFRKNGIQRP 176
>AF026555-1|AAB97516.1| 221|Caenorhabditis elegans GATA
transcription factor END-1 protein.
Length = 221
Score = 45.6 bits (103), Expect = 1e-04
Identities = 21/48 (43%), Positives = 23/48 (47%)
Query: 460 PSMAGMGEVKECVNCAAATTPLWRRDGTGHYLCNACGLYTRINGVNRP 507
PS V NC T LWRR +G CN C LY R NG+ RP
Sbjct: 129 PSTFHTNSVCSNPNCRTRETTLWRRTDSGAIECNGCSLYFRKNGIQRP 176
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 32.7 bits (71), Expect = 0.76
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 158 PYRSMQSPIPVDKRLPVQYTRAPQRPAYGR 187
PY + PIP +P+QYT+ P +P Y +
Sbjct: 564 PYWTTPVPIPTQVYMPMQYTQQPMQPMYNQ 593
>Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical
protein R08B4.1a protein.
Length = 1137
Score = 32.7 bits (71), Expect = 0.76
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 158 PYRSMQSPIPVDKRLPVQYTRAPQRPAYGR 187
PY + PIP +P+QYT+ P +P Y +
Sbjct: 564 PYWTTPVPIPTQVYMPMQYTQQPMQPMYNQ 593
>U61288-1|AAB17543.1| 790|Caenorhabditis elegans CE protein.
Length = 790
Score = 32.7 bits (71), Expect = 0.76
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 158 PYRSMQSPIPVDKRLPVQYTRAPQRPAYGR 187
PY + PIP +P+QYT+ P +P Y +
Sbjct: 217 PYWTTPVPIPTQVYMPMQYTQQPMQPMYNQ 246
>Z68121-1|CAA92204.2| 174|Caenorhabditis elegans Hypothetical
protein T24D3.1 protein.
Length = 174
Score = 31.5 bits (68), Expect = 1.7
Identities = 15/68 (22%), Positives = 25/68 (36%), Gaps = 1/68 (1%)
Query: 498 YTRINGVNRPPLKGQKAKPQQALPSNGNRRMGVTCANCXXXXXXXXXXXXXGEPV-CNAC 556
+T + P + PSN + + C+NC E + CNAC
Sbjct: 80 FTTFTHFSTPSTSPSTSTQSSTTPSNSDNKKSFQCSNCSVTETIRWRNIRSKEGIQCNAC 139
Query: 557 GLYFKLHN 564
+Y + +N
Sbjct: 140 FIYQRKYN 147
Score = 30.7 bits (66), Expect = 3.0
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 460 PSMAGMGEVKECVNCAAATTPLWRRDGTGHYL-CNACGLYTRINGVNRP 507
PS + + +C NC+ T WR + + CNAC +Y R RP
Sbjct: 103 PSNSDNKKSFQCSNCSVTETIRWRNIRSKEGIQCNACFIYQRKYNKTRP 151
>AF302237-1|AAG21385.1| 174|Caenorhabditis elegans GATA-type
transcription factor protein.
Length = 174
Score = 31.5 bits (68), Expect = 1.7
Identities = 15/68 (22%), Positives = 25/68 (36%), Gaps = 1/68 (1%)
Query: 498 YTRINGVNRPPLKGQKAKPQQALPSNGNRRMGVTCANCXXXXXXXXXXXXXGEPV-CNAC 556
+T + P + PSN + + C+NC E + CNAC
Sbjct: 80 FTTFTHFSTPSTSPSTSTQSSTTPSNSDNKKSFQCSNCSVTETIRWRNIRSKEGIQCNAC 139
Query: 557 GLYFKLHN 564
+Y + +N
Sbjct: 140 FIYQRKYN 147
Score = 30.7 bits (66), Expect = 3.0
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 460 PSMAGMGEVKECVNCAAATTPLWRRDGTGHYL-CNACGLYTRINGVNRP 507
PS + + +C NC+ T WR + + CNAC +Y R RP
Sbjct: 103 PSNSDNKKSFQCSNCSVTETIRWRNIRSKEGIQCNACFIYQRKYNKTRP 151
>U00044-5|AAK93857.1| 174|Caenorhabditis elegans Mesoderm and
endoderm determinationprotein 2 protein.
Length = 174
Score = 30.7 bits (66), Expect = 3.0
Identities = 15/68 (22%), Positives = 25/68 (36%), Gaps = 1/68 (1%)
Query: 498 YTRINGVNRPPLKGQKAKPQQALPSNGNRRMGVTCANCXXXXXXXXXXXXXGEPV-CNAC 556
+T + P + PSN + + C+NC E + CNAC
Sbjct: 80 FTTFTHFSTPSTSPSTSTQSSTPPSNSDNKKSFQCSNCSVTETIRWRNIRSKEGIQCNAC 139
Query: 557 GLYFKLHN 564
+Y + +N
Sbjct: 140 FIYQRKYN 147
Score = 30.7 bits (66), Expect = 3.0
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 460 PSMAGMGEVKECVNCAAATTPLWRRDGTGHYL-CNACGLYTRINGVNRP 507
PS + + +C NC+ T WR + + CNAC +Y R RP
Sbjct: 103 PSNSDNKKSFQCSNCSVTETIRWRNIRSKEGIQCNACFIYQRKYNETRP 151
>AF302238-1|AAG21386.1| 174|Caenorhabditis elegans GATA-type
transcription factor protein.
Length = 174
Score = 30.7 bits (66), Expect = 3.0
Identities = 15/68 (22%), Positives = 25/68 (36%), Gaps = 1/68 (1%)
Query: 498 YTRINGVNRPPLKGQKAKPQQALPSNGNRRMGVTCANCXXXXXXXXXXXXXGEPV-CNAC 556
+T + P + PSN + + C+NC E + CNAC
Sbjct: 80 FTTFTHFSTPSTSPSTSTQSSTPPSNSDNKKSFQCSNCSVTETIRWRNIRSKEGIQCNAC 139
Query: 557 GLYFKLHN 564
+Y + +N
Sbjct: 140 FIYQRKYN 147
Score = 30.7 bits (66), Expect = 3.0
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 460 PSMAGMGEVKECVNCAAATTPLWRRDGTGHYL-CNACGLYTRINGVNRP 507
PS + + +C NC+ T WR + + CNAC +Y R RP
Sbjct: 103 PSNSDNKKSFQCSNCSVTETIRWRNIRSKEGIQCNACFIYQRKYNETRP 151
>AF025460-2|AAF02169.3| 545|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 41
protein.
Length = 545
Score = 30.7 bits (66), Expect = 3.0
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 4/89 (4%)
Query: 226 AYAATSEAGPVDGRQYAAVLGEQVAASTALEMIQTTSLNNQ--QSVGVAYQQVKYETRGE 283
A AATS+ P A +Q+A S L+ Q T L NQ Q + QQ + + R +
Sbjct: 178 AAAATSQQAPPAQASQATSAAQQIATSMGLQPAQVTDLVNQHAQQYLLLQQQQQQQQREQ 237
Query: 284 PEPRPTTYASLQPVTSVH--GGYAYAGQS 310
+ + +Q H GG A Q+
Sbjct: 238 QQQQQLQAQQVQQQLIAHLLGGGHQAQQA 266
>Z66498-5|CAA91294.2| 513|Caenorhabditis elegans Hypothetical
protein C26D10.6a protein.
Length = 513
Score = 30.3 bits (65), Expect = 4.0
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 371 AHVVYGSVVPQSQTVYEAPPSPNSQQVTLYTHGNTVQYKVGGEHY 415
AHV YG + P S++ + P + TL HG+ + G+HY
Sbjct: 333 AHVEYGEISP-SESFADCSDFPVETRDTLILHGSKEACPIRGKHY 376
>Z54327-14|CAA91124.2| 513|Caenorhabditis elegans Hypothetical
protein C26D10.6a protein.
Length = 513
Score = 30.3 bits (65), Expect = 4.0
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 371 AHVVYGSVVPQSQTVYEAPPSPNSQQVTLYTHGNTVQYKVGGEHY 415
AHV YG + P S++ + P + TL HG+ + G+HY
Sbjct: 333 AHVEYGEISP-SESFADCSDFPVETRDTLILHGSKEACPIRGKHY 376
>Z81045-5|CAB02815.1| 322|Caenorhabditis elegans Hypothetical
protein C36F7.5 protein.
Length = 322
Score = 29.5 bits (63), Expect = 7.0
Identities = 30/109 (27%), Positives = 41/109 (37%), Gaps = 6/109 (5%)
Query: 377 SVVPQSQTVYEAPPSPNSQQVTLYTHGNTVQYKVG-----GEHYLGQSGGVEYVPVSGYE 431
S P S+ AP +PN++ TH Q G E G +GGV P + +
Sbjct: 56 SPTPASKDAPPAPAAPNAKPTMAATHDPNYQTLAGLNDNVFEKKDGGAGGVGPAPPANAK 115
Query: 432 GGLLVEGYP-APTQAWPAHNLLPIDDGFDPSMAGMGEVKECVNCAAATT 479
G+ P T A +N+ DG P+ G G A A T
Sbjct: 116 PGMAATHDPNYQTLAGLNNNVFGKKDGAAPAAGGGGPAAPADQNAKAAT 164
>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical
protein K04H4.1b protein.
Length = 1502
Score = 29.1 bits (62), Expect = 9.3
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 411 GGEHYLGQSGGVEYVPVSGYEGGLLVEGYP-APTQ-AWPAHNLLPIDDG 457
GG Y G++G + GY G +GYP +P Q +P + +P +DG
Sbjct: 650 GGPGYSGEAGAPGQNGMDGYPGAPGDQGYPGSPGQDGYPGPSGIPGEDG 698
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical
protein K04H4.1a protein.
Length = 1759
Score = 29.1 bits (62), Expect = 9.3
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 411 GGEHYLGQSGGVEYVPVSGYEGGLLVEGYP-APTQ-AWPAHNLLPIDDG 457
GG Y G++G + GY G +GYP +P Q +P + +P +DG
Sbjct: 907 GGPGYSGEAGAPGQNGMDGYPGAPGDQGYPGSPGQDGYPGPSGIPGEDG 955
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV)
collagen protein.
Length = 1758
Score = 29.1 bits (62), Expect = 9.3
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 411 GGEHYLGQSGGVEYVPVSGYEGGLLVEGYP-APTQ-AWPAHNLLPIDDG 457
GG Y G++G + GY G +GYP +P Q +P + +P +DG
Sbjct: 906 GGPGYSGEAGAPGQNGMDGYPGAPGDQGYPGSPGQDGYPGPSGIPGEDG 954
>U41546-6|AAC48223.1| 798|Caenorhabditis elegans Hypothetical
protein T25B6.2 protein.
Length = 798
Score = 29.1 bits (62), Expect = 9.3
Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 8/95 (8%)
Query: 215 FLSHKDKNELQAYAATSEAGPVDGRQYAAVLGEQVAASTALEMIQTTSLNNQQSVGVAYQ 274
FL + D +L S G D Q V E VAA + +++ TT+ ++ A++
Sbjct: 97 FLQNTDLQKL----GRSRLGTYDQAQ-VDVYSEIVAALSKIDVTSTTTSKTERITKAAFE 151
Query: 275 QVKYETRGEPEPRPTTYASLQPVTSVHGGYAYAGQ 309
K + YA +TS+ GG + G+
Sbjct: 152 TCKNNLASPADKTAVVYAE---ITSLFGGVPFFGE 183
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.312 0.129 0.386
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,084,877
Number of Sequences: 27539
Number of extensions: 516949
Number of successful extensions: 1115
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1056
Number of HSP's gapped (non-prelim): 64
length of query: 595
length of database: 12,573,161
effective HSP length: 85
effective length of query: 510
effective length of database: 10,232,346
effective search space: 5218496460
effective search space used: 5218496460
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 62 (29.1 bits)
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