Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002156-TA|BGIBMGA002156-PA|IPR000679|Zinc finger,
GATA-type
(301 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0267 - 16333239-16333820,16333904-16334842,16334920-163351... 46 5e-05
03_06_0556 + 34699994-34700017,34700116-34700229,34700350-34700622 44 1e-04
01_06_0154 - 27049218-27049517,27049679-27050107 44 1e-04
12_01_0442 + 3495333-3496484 43 3e-04
05_07_0153 - 28051496-28051801,28051933-28052271 43 3e-04
01_03_0183 + 13543833-13544051,13544161-13544257,13545616-135457... 43 3e-04
05_01_0404 - 3185603-3185920,3186877-3186993,3187087-3187107 42 6e-04
11_01_0560 - 4413174-4414469 41 0.001
02_05_1145 + 34429060-34429401,34430053-34430967 41 0.001
03_01_0217 - 1712979-1713794 39 0.004
05_06_0110 + 25632514-25632834,25633200-25634039 39 0.006
06_03_0530 + 21807464-21807685,21807809-21808207,21808312-21808818 38 0.007
01_06_0683 - 31173763-31174635,31175146-31175436 38 0.007
03_01_0316 + 2487917-2488003,2488104-2488676 38 0.010
12_02_1180 + 26727171-26727239,26728782-26729642 38 0.013
02_05_0121 + 26015578-26015613,26015734-26016066,26016184-26016978 37 0.017
02_02_0094 - 6705094-6705564,6705759-6706139,6706287-6706496 37 0.017
10_08_0898 + 21424379-21424792,21424974-21425723 37 0.023
04_04_0655 + 26974366-26974398,26974480-26974899,26975023-26975859 36 0.053
03_05_1042 - 29893649-29893721,29893960-29894033,29894111-298941... 33 0.21
03_05_0713 - 27070063-27070126,27070202-27070290,27070369-270704... 33 0.21
02_01_0371 + 2664488-2664862,2664973-2665059,2665155-2665267,266... 32 0.49
03_02_0813 - 11446138-11446155,11446782-11447027,11447172-114474... 31 0.86
06_03_1267 - 28851286-28851306,28851452-28851520,28852031-288520... 31 1.1
05_07_0238 + 28597399-28598286 31 1.1
08_02_1253 - 25602258-25602640,25603305-25603767 30 2.6
12_02_0118 - 13869237-13869307,13869375-13869465,13870321-138704... 29 6.0
07_03_1267 + 25318220-25318407,25318674-25318844,25319086-253191... 28 8.0
03_03_0008 - 13674602-13674708,13675272-13675439,13676169-136767... 28 8.0
>10_08_0267 -
16333239-16333820,16333904-16334842,16334920-16335172,
16336837-16337063,16338189-16339388
Length = 1066
Score = 45.6 bits (103), Expect = 5e-05
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 162 RPGTMCTNCQTTATSLWRRNVQGET-VCNACGLYFKLHNVNRPLTMKKDSIQTRKRKPKN 220
R G C +C TT T WR +CNACG ++ +N T ++S Q +K+K K+
Sbjct: 770 RAGRECAHCGTTKTPAWRLGPDSRRKLCNACGNKYRSGQLN-STTFSQNS-QEQKKKSKS 827
Query: 221 SNIKADRSAKAVQRAVSAG 239
S +R AV V G
Sbjct: 828 SACSRERKRSAVAATVVVG 846
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Query: 34 EGRECVNCGAIHTPLWRRDGTGH-YLCNACGL---YNKMNGMNRPLKQP 78
+G +C +CG TP WR GH LCNAC + K+ RPL+ P
Sbjct: 599 KGLQCRHCGTTETPQWRHGPEGHRTLCNACSMRYRSGKLVPEYRPLRSP 647
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 154 QKKGMGAKRPGTMCTNCQTTATSLWRRNVQG-ETVCNACGLYFK 196
+K A G C +C TT T WR +G T+CNAC + ++
Sbjct: 590 EKMATAAAAKGLQCRHCGTTETPQWRHGPEGHRTLCNACSMRYR 633
Score = 38.7 bits (86), Expect = 0.006
Identities = 16/30 (53%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 35 GRECVNCGAIHTPLWR-RDGTGHYLCNACG 63
GREC +CG TP WR + LCNACG
Sbjct: 772 GRECAHCGTTKTPAWRLGPDSRRKLCNACG 801
Score = 32.7 bits (71), Expect = 0.37
Identities = 15/30 (50%), Positives = 16/30 (53%), Gaps = 3/30 (10%)
Query: 36 RECVNCGAIHTPLWRR--DGTGHYLCNACG 63
R C +CG TP W D G LCNACG
Sbjct: 991 RRCTHCGTTKTPAWLSGPDSRGK-LCNACG 1019
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 160 AKRPGTMCTNCQTTATSLWRRNVQGE-TVCNACGLYFK 196
AK CT+C TT T W +CNACG ++
Sbjct: 986 AKAVERRCTHCGTTKTPAWLSGPDSRGKLCNACGKQYR 1023
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/20 (60%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
Query: 35 GRECVNCGAIHTPLWR-RDG 53
G +C +CG+ TPLWR RDG
Sbjct: 928 GWQCRHCGSTETPLWRERDG 947
>03_06_0556 + 34699994-34700017,34700116-34700229,34700350-34700622
Length = 136
Score = 44.4 bits (100), Expect = 1e-04
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
Query: 167 CTNCQTTATSLWRRNVQG-ETVCNACGLYFKLHNVNRPLTMKKDSIQTRKRKPKNSNIKA 225
CT+C TT T LWR G +++CNACG+ ++ R + D+ + + + K
Sbjct: 27 CTDCHTTKTPLWRGGPSGPKSLCNACGIRYR---KKRREALGLDAGEGGAERQEKKKSKR 83
Query: 226 DRSAKAVQRAVSAGIKMESILESARR 251
+R + G E +L+ RR
Sbjct: 84 ERGEEVTMELRMVGFGKEVVLKQRRR 109
Score = 36.3 bits (80), Expect = 0.030
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 34 EGRECVNCGAIHTPLWRRDGTG-HYLCNACGL-YNK 67
E + C +C TPLWR +G LCNACG+ Y K
Sbjct: 23 EPKACTDCHTTKTPLWRGGPSGPKSLCNACGIRYRK 58
>01_06_0154 - 27049218-27049517,27049679-27050107
Length = 242
Score = 44.4 bits (100), Expect = 1e-04
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 157 GMGAKRPGTMCTNCQTTATSLWRRNVQG-ETVCNACGLYFK 196
G A C NC TT+T LWR +G +++CNACG+ +K
Sbjct: 114 GAAAASAPRRCANCDTTSTPLWRNGPRGPKSLCNACGIRYK 154
Score = 39.1 bits (87), Expect = 0.004
Identities = 17/33 (51%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 36 RECVNCGAIHTPLWRRDGTG-HYLCNACGLYNK 67
R C NC TPLWR G LCNACG+ K
Sbjct: 122 RRCANCDTTSTPLWRNGPRGPKSLCNACGIRYK 154
>12_01_0442 + 3495333-3496484
Length = 383
Score = 42.7 bits (96), Expect = 3e-04
Identities = 24/59 (40%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 36 RECVNCGAIHTPLWRRDGTGH-YLCNACGLYNKMNGMNRPLKQPRRLVRQRHAALAEPP 93
R C+NC A+ TP WR G LCNACG+ + G + P R AA A PP
Sbjct: 118 RRCLNCDAVETPQWRSGPMGRSTLCNACGVRLRAVGSLPEHRAP--AARTTTAAPASPP 174
Score = 41.9 bits (94), Expect = 6e-04
Identities = 17/30 (56%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 36 RECVNCGAIHTPLWRRDGTGH-YLCNACGL 64
R CV+CG+ TP WR TG LCNACG+
Sbjct: 246 RSCVHCGSTETPQWREGPTGRGTLCNACGV 275
Score = 36.3 bits (80), Expect = 0.030
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 153 KQKKGMGAKRPGTMCTNCQTTATSLWRRNVQG-ETVCNACGL 193
+++ G A + C NC T WR G T+CNACG+
Sbjct: 106 EEEAGKRAAKRARRCLNCDAVETPQWRSGPMGRSTLCNACGV 147
Score = 36.3 bits (80), Expect = 0.030
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 153 KQKKGMGAKRPGTM--CTNCQTTATSLWRRNVQGE-TVCNACGLYFK 196
K K AK+P C +C +T T WR G T+CNACG+ ++
Sbjct: 232 KTKTKAKAKKPKRKRSCVHCGSTETPQWREGPTGRGTLCNACGVRYR 278
>05_07_0153 - 28051496-28051801,28051933-28052271
Length = 214
Score = 42.7 bits (96), Expect = 3e-04
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 155 KKGMGAKRPGTMCTNCQTTATSLWRRNVQG-ETVCNACGLYFK 196
K+ A R C NC T +T LWR +G +++CNACG+ +K
Sbjct: 82 KEAPAAGRLPRRCANCDTMSTPLWRNGPRGPKSLCNACGIRYK 124
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 36 RECVNCGAIHTPLWRRDGTG-HYLCNACGLYNK 67
R C NC + TPLWR G LCNACG+ K
Sbjct: 92 RRCANCDTMSTPLWRNGPRGPKSLCNACGIRYK 124
>01_03_0183 +
13543833-13544051,13544161-13544257,13545616-13545707,
13545928-13546047,13546170-13546355,13546439-13546602,
13546691-13546769,13548256-13548387,13548560-13548687,
13548785-13549140,13549211-13549221,13549312-13549431,
13549510-13549637,13552210-13552260,13553105-13553189,
13553856-13553954,13555260-13555535
Length = 780
Score = 42.7 bits (96), Expect = 3e-04
Identities = 27/61 (44%), Positives = 34/61 (55%), Gaps = 8/61 (13%)
Query: 25 GVELAEFFTEGRE-CVNCGAIHTPLWRRDGTG-HYLCNACGL-YNK--MNGMNRPLKQPR 79
G+ +AE EGR CV C A TP+WR TG LCNACG+ Y K + L QP+
Sbjct: 659 GIGVAE---EGRRSCVECRATTTPMWRSGPTGPRSLCNACGIRYRKKRRQDLGLDLNQPQ 715
Query: 80 R 80
+
Sbjct: 716 K 716
Score = 37.1 bits (82), Expect = 0.017
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 157 GMGAKRPGTM-CTNCQTTATSLWRRNVQG-ETVCNACGLYFK 196
G+G G C C+ T T +WR G ++CNACG+ ++
Sbjct: 659 GIGVAEEGRRSCVECRATTTPMWRSGPTGPRSLCNACGIRYR 700
>05_01_0404 - 3185603-3185920,3186877-3186993,3187087-3187107
Length = 151
Score = 41.9 bits (94), Expect = 6e-04
Identities = 20/34 (58%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Query: 36 RECVNCGAIHTPLWRRDGTG-HYLCNACGL-YNK 67
R CV CGA TP+WR TG LCNACG+ Y K
Sbjct: 25 RCCVECGATTTPMWRGGPTGPRSLCNACGIRYRK 58
Score = 33.9 bits (74), Expect = 0.16
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 167 CTNCQTTATSLWRRNVQG-ETVCNACGLYFK 196
C C T T +WR G ++CNACG+ ++
Sbjct: 27 CVECGATTTPMWRGGPTGPRSLCNACGIRYR 57
>11_01_0560 - 4413174-4414469
Length = 431
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/36 (52%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Query: 36 RECVNCGAIHTPLWRR--DGTGHYLCNACGLYNKMN 69
R C +CG TP WR DG G LCNACG+ +KM+
Sbjct: 361 RRCSHCGTSETPQWRMGPDGPG-TLCNACGIRSKMD 395
Score = 35.5 bits (78), Expect = 0.053
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 162 RPGTMCTNCQTTATSLWRRNVQGE-TVCNACGLYFKL 197
R C++C T+ T WR G T+CNACG+ K+
Sbjct: 358 RKDRRCSHCGTSETPQWRMGPDGPGTLCNACGIRSKM 394
>02_05_1145 + 34429060-34429401,34430053-34430967
Length = 418
Score = 41.1 bits (92), Expect = 0.001
Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 4/49 (8%)
Query: 151 DYKQKKGMGAKRPGTM--CTNCQTTATSLWRRNVQG-ETVCNACGLYFK 196
DY++ G A PGT+ CT+CQ T WR G +T+CNACG+ +K
Sbjct: 318 DYEEG-GALALPPGTVRRCTHCQIEKTPQWRAGPLGPKTLCNACGVRYK 365
Score = 32.3 bits (70), Expect = 0.49
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 36 RECVNCGAIHTPLWRRDGTG-HYLCNACGLYNK 67
R C +C TP WR G LCNACG+ K
Sbjct: 333 RRCTHCQIEKTPQWRAGPLGPKTLCNACGVRYK 365
>03_01_0217 - 1712979-1713794
Length = 271
Score = 39.1 bits (87), Expect = 0.004
Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 167 CTNCQTTATSLWRRNVQG-ETVCNACGLYFKLHNV 200
C +CQTT T WR G T+CNACG+ +++ ++
Sbjct: 188 CGHCQTTETPQWRVGPDGPSTLCNACGIRYRIDHL 222
Score = 31.9 bits (69), Expect = 0.65
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 34 EGRECVNCGAIHTPLWRRDGTG-HYLCNACGL 64
E + C +C TP WR G LCNACG+
Sbjct: 184 EEKRCGHCQTTETPQWRVGPDGPSTLCNACGI 215
>05_06_0110 + 25632514-25632834,25633200-25634039
Length = 386
Score = 38.7 bits (86), Expect = 0.006
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 160 AKRPGTMCTNCQTTATSLWRRNVQG-ETVCNACGLYFK 196
A G C +C+T T WR G +T+CNACG+ +K
Sbjct: 248 AAAEGRRCLHCETDKTPQWRTGPMGPKTLCNACGVRYK 285
Score = 38.3 bits (85), Expect = 0.007
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 29 AEFFTEGRECVNCGAIHTPLWRRDGTG-HYLCNACGLYNK 67
A+ EGR C++C TP WR G LCNACG+ K
Sbjct: 246 AQAAAEGRRCLHCETDKTPQWRTGPMGPKTLCNACGVRYK 285
>06_03_0530 + 21807464-21807685,21807809-21808207,21808312-21808818
Length = 375
Score = 38.3 bits (85), Expect = 0.007
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 23 GRGVELAEFFTEGRECVNCGAIHTPLWRRDGTG-HYLCNACGL 64
G G + + F R C +C TPLWR G LCNACG+
Sbjct: 173 GHGGAMGQAFGVIRVCSDCNTTKTPLWRSGPCGPKSLCNACGI 215
Score = 37.1 bits (82), Expect = 0.017
Identities = 14/29 (48%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Query: 166 MCTNCQTTATSLWRRNVQG-ETVCNACGL 193
+C++C TT T LWR G +++CNACG+
Sbjct: 187 VCSDCNTTKTPLWRSGPCGPKSLCNACGI 215
>01_06_0683 - 31173763-31174635,31175146-31175436
Length = 387
Score = 38.3 bits (85), Expect = 0.007
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 164 GTMCTNCQTTATSLWRRNVQG-ETVCNACGLYFK 196
G C +C+T T WR G +T+CNACG+ +K
Sbjct: 261 GRRCLHCETDKTPQWRTGPMGPKTLCNACGVRYK 294
Score = 37.9 bits (84), Expect = 0.010
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Query: 34 EGRECVNCGAIHTPLWRRDGTG-HYLCNACGLYNKMNGM---NRPLKQPRRLV 82
EGR C++C TP WR G LCNACG+ K + RP P +V
Sbjct: 260 EGRRCLHCETDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFMV 312
>03_01_0316 + 2487917-2488003,2488104-2488676
Length = 219
Score = 37.9 bits (84), Expect = 0.010
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 160 AKRPGTMCTNCQTTATSLWRRNVQG-ETVCNACGLYFK 196
A P CT+C T WR G T+CNACG+ FK
Sbjct: 117 AGAPRRRCTHCAVDETPQWRLGPDGPRTLCNACGVRFK 154
Score = 33.5 bits (73), Expect = 0.21
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 36 RECVNCGAIHTPLWRRDGTG-HYLCNACGL 64
R C +C TP WR G LCNACG+
Sbjct: 122 RRCTHCAVDETPQWRLGPDGPRTLCNACGV 151
>12_02_1180 + 26727171-26727239,26728782-26729642
Length = 309
Score = 37.5 bits (83), Expect = 0.013
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 160 AKRPGTMCTNCQTTATSLWRRNVQG-ETVCNACGLYFK 196
++ P CT+C + T WR G +T+CNACG+ FK
Sbjct: 232 SEEPMKRCTHCLSYKTPQWRTGPLGPKTLCNACGVRFK 269
Score = 31.5 bits (68), Expect = 0.86
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 36 RECVNCGAIHTPLWRRDGTG-HYLCNACGL 64
+ C +C + TP WR G LCNACG+
Sbjct: 237 KRCTHCLSYKTPQWRTGPLGPKTLCNACGV 266
>02_05_0121 + 26015578-26015613,26015734-26016066,26016184-26016978
Length = 387
Score = 37.1 bits (82), Expect = 0.017
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Query: 157 GMGAKRPGT---MCTNCQTTATSLWRRNVQG-ETVCNACGLYFK 196
G GA P T C++C T WR +G +T+CNACG+ +K
Sbjct: 293 GGGAALPATGDRRCSHCGVQKTPQWRAGPEGAKTLCNACGVRYK 336
Score = 35.9 bits (79), Expect = 0.040
Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 33 TEGRECVNCGAIHTPLWRRDGTG-HYLCNACGLYNK 67
T R C +CG TP WR G LCNACG+ K
Sbjct: 301 TGDRRCSHCGVQKTPQWRAGPEGAKTLCNACGVRYK 336
>02_02_0094 - 6705094-6705564,6705759-6706139,6706287-6706496
Length = 353
Score = 37.1 bits (82), Expect = 0.017
Identities = 14/29 (48%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Query: 166 MCTNCQTTATSLWRRNVQG-ETVCNACGL 193
+C++C TT T LWR G +++CNACG+
Sbjct: 177 VCSDCNTTKTPLWRSGPCGPKSLCNACGI 205
Score = 35.1 bits (77), Expect = 0.070
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 36 RECVNCGAIHTPLWRRDGTG-HYLCNACGL 64
R C +C TPLWR G LCNACG+
Sbjct: 176 RVCSDCNTTKTPLWRSGPCGPKSLCNACGI 205
>10_08_0898 + 21424379-21424792,21424974-21425723
Length = 387
Score = 36.7 bits (81), Expect = 0.023
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 167 CTNCQTTATSLWRRNVQG-ETVCNACGLYFK 196
CT+C + T WR G +T+CNACG+ FK
Sbjct: 278 CTHCASEKTPQWRTGPLGPKTLCNACGVRFK 308
Score = 33.9 bits (74), Expect = 0.16
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 36 RECVNCGAIHTPLWRRDGTG-HYLCNACGLYNKMNGMNRPLKQP 78
R C +C + TP WR G LCNACG+ K +G P +P
Sbjct: 276 RRCTHCASEKTPQWRTGPLGPKTLCNACGVRFK-SGRLMPEYRP 318
>04_04_0655 + 26974366-26974398,26974480-26974899,26975023-26975859
Length = 429
Score = 35.5 bits (78), Expect = 0.053
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 160 AKRPGTM-CTNCQTTATSLWRRNVQG-ETVCNACGLYFK 196
A PG C++C T WR +G +T+CNACG+ +K
Sbjct: 336 APAPGDRRCSHCGVQKTPQWRAGPEGAKTLCNACGVRYK 374
Score = 35.1 bits (77), Expect = 0.070
Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 36 RECVNCGAIHTPLWRRDGTG-HYLCNACGLYNK 67
R C +CG TP WR G LCNACG+ K
Sbjct: 342 RRCSHCGVQKTPQWRAGPEGAKTLCNACGVRYK 374
>03_05_1042 -
29893649-29893721,29893960-29894033,29894111-29894179,
29894333-29894438,29894548-29894664,29895412-29895527,
29895612-29895698,29897281-29897309,29897914-29898169
Length = 308
Score = 33.5 bits (73), Expect = 0.21
Identities = 21/50 (42%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Query: 38 CVNCGAIH--TPLWRRDGTG-HYLCNACGLYNKMNG-MNRPLKQPRRLVR 83
C NCG TP RR G LCNACGL G + PL P+ V+
Sbjct: 203 CQNCGISSRLTPAMRRGPAGPRSLCNACGLMWANKGTLRSPLNAPKMTVQ 252
>03_05_0713 -
27070063-27070126,27070202-27070290,27070369-27070428,
27071110-27071215,27071309-27071428,27072340-27072476,
27072561-27072647,27073660-27073956
Length = 319
Score = 33.5 bits (73), Expect = 0.21
Identities = 27/84 (32%), Positives = 35/84 (41%), Gaps = 6/84 (7%)
Query: 30 EFFTEGRECVNCGAIH--TPLWRRDGTG-HYLCNACGLY--NKMNGMNRP-LKQPRRLVR 83
+F + +C NCG TP RR G LCNACGL NK N P K +V
Sbjct: 207 DFLSRESKCQNCGTSEKMTPAMRRGPAGPRTLCNACGLMWANKGTLRNCPKAKVESSVVA 266
Query: 84 QRHAALAEPPHDVRTSPSLSLSPE 107
+ A P + + +PE
Sbjct: 267 TEQSNAAVSPSGIDNKELVVPNPE 290
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Query: 167 CTNCQTTA--TSLWRRNVQG-ETVCNACGL 193
C NC T+ T RR G T+CNACGL
Sbjct: 215 CQNCGTSEKMTPAMRRGPAGPRTLCNACGL 244
>02_01_0371 +
2664488-2664862,2664973-2665059,2665155-2665267,
2665506-2665634,2666688-2666793,2667296-2667367,
2667702-2667806
Length = 328
Score = 32.3 bits (70), Expect = 0.49
Identities = 17/31 (54%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Query: 37 ECVNCG--AIHTPLWRRDGTG-HYLCNACGL 64
EC +CG A TP+ RR G LCNACGL
Sbjct: 235 ECHHCGISAASTPMMRRGPDGPRTLCNACGL 265
Score = 29.1 bits (62), Expect = 4.6
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 10/88 (11%)
Query: 167 CTNCQTTATS--LWRRNVQG-ETVCNACGLYFKLHNVNRPLT----MKKDSIQTRKRKPK 219
C +C +A S + RR G T+CNACGL + R +T + + +
Sbjct: 236 CHHCGISAASTPMMRRGPDGPRTLCNACGLMWANKGTMREVTKGPPVPLQIVPAATNDVQ 295
Query: 220 NSNIKA---DRSAKAVQRAVSAGIKMES 244
N ++A ++ AV+ AVSA ES
Sbjct: 296 NGIVEATGVEQHNSAVEEAVSAANGHES 323
>03_02_0813 -
11446138-11446155,11446782-11447027,11447172-11447443,
11447544-11447595,11447700-11447777,11448860-11448919,
11449006-11449086,11449601-11449645,11450118-11450183
Length = 305
Score = 31.5 bits (68), Expect = 0.86
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 199 NVNRPLTMKKDSIQTRKRKPKNSNIKADRSAKAVQRAVSAGIKMESILESARRSPPRLGY 258
N + L +K D Q+ P NS+ ++DRS K + + V + E+AR+S R
Sbjct: 29 NFVKNLIVKVDG-QSGAIVPSNSSDRSDRSDKPMDQKVLRRLAQNR--EAARKSRLRKKA 85
Query: 259 YVQSAEGMKLE 269
YVQ E KL+
Sbjct: 86 YVQQLESSKLK 96
>06_03_1267 -
28851286-28851306,28851452-28851520,28852031-28852066,
28852381-28852486,28852869-28852997,28853685-28853797,
28853907-28853993,28854106-28854543
Length = 332
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/31 (54%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Query: 37 ECVNCG--AIHTPLWRRDGTG-HYLCNACGL 64
EC +CG A TP+ RR G LCNACGL
Sbjct: 256 ECHHCGINAKATPMMRRGPDGPRTLCNACGL 286
>05_07_0238 + 28597399-28598286
Length = 295
Score = 31.1 bits (67), Expect = 1.1
Identities = 11/20 (55%), Positives = 11/20 (55%)
Query: 36 RECVNCGAIHTPLWRRDGTG 55
R C NCG TPLWR G
Sbjct: 128 RRCANCGTASTPLWRNGPRG 147
>08_02_1253 - 25602258-25602640,25603305-25603767
Length = 281
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 249 ARRSPPRLGYYVQSAEGMKLEEPQHHVMYIGVPELG-PHKAAPHHDHSAVSLA 300
AR PP + V + + E +H V ++G E+ P +A P HD A LA
Sbjct: 70 ARPPPPAIVAVVVAQDDEAAHERRHAVDHVGRLEVAPPDEAVPPHDARAAGLA 122
>12_02_0118 -
13869237-13869307,13869375-13869465,13870321-13870440,
13870668-13870795,13871159-13871270,13871719-13871817,
13871918-13871992,13872099-13872320,13873177-13874034
Length = 591
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Query: 20 HCQGRGVELAEFFTEGR-ECVNCGAIHTPLWRRDGTG-HYLCNACGLYN 66
H ++L +F G C C A P R G H++CN CG N
Sbjct: 411 HPSEEPIQLVDFGGMGPIRCSRCKAYINPFMRFIDQGKHFVCNLCGFSN 459
>07_03_1267 +
25318220-25318407,25318674-25318844,25319086-25319188,
25319394-25319885,25320723-25321156,25321333-25321388,
25321711-25321775,25322139-25322147
Length = 505
Score = 28.3 bits (60), Expect = 8.0
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query: 38 CVNCGAIH--TPLWRRDGTG-HYLCNACGLYNKMNGMNRPLK 76
C+ CG TP RR G LCNACG+ + M R ++
Sbjct: 121 CLRCGISGNATPHMRRGPDGPRTLCNACGIAYRKGKMRRMIE 162
>03_03_0008 -
13674602-13674708,13675272-13675439,13676169-13676787,
13676868-13677330,13677855-13678036,13678093-13678235,
13678315-13678423,13679000-13679456,13680490-13682473,
13682507-13682626,13682920-13682971
Length = 1467
Score = 28.3 bits (60), Expect = 8.0
Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 163 PGTMCTNCQTTATSLWRRNVQGETVCN-ACGLYFKLHNVNRPLTMKKDSIQTRKRKPKNS 221
PGT N + T+ ET N A FK H+ + + MKK I RKRKP +
Sbjct: 244 PGTSNNNKKLNYTTKVDSTCDSETSQNGALETQFKSHDASS-IPMKKSVIFKRKRKPSRN 302
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.132 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,710,763
Number of Sequences: 37544
Number of extensions: 283450
Number of successful extensions: 678
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 623
Number of HSP's gapped (non-prelim): 63
length of query: 301
length of database: 14,793,348
effective HSP length: 82
effective length of query: 219
effective length of database: 11,714,740
effective search space: 2565528060
effective search space used: 2565528060
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 60 (28.3 bits)
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