GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002156-TA|BGIBMGA002156-PA|IPR000679|Zinc finger,
GATA-type
         (301 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...   105   1e-24
AJ404478-1|CAC16182.1|   77|Anopheles gambiae putative GATA fact...    56   9e-10
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    29   0.21 
AY390608-1|AAR27305.1|  242|Anopheles gambiae SP22D protein.           28   0.28 
AY390607-1|AAR27304.1|  242|Anopheles gambiae SP22D protein.           28   0.28 
AY390606-1|AAR27303.1|  241|Anopheles gambiae SP22D protein.           28   0.28 
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr...    28   0.28 
AY390605-1|AAR27302.1|  241|Anopheles gambiae SP22D protein.           27   0.49 
AY390604-1|AAR27301.1|  241|Anopheles gambiae SP22D protein.           27   0.65 
AY390603-1|AAR27300.1|  241|Anopheles gambiae SP22D protein.           27   0.65 
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22...    27   0.65 
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    24   4.6  
Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL...    23   8.0  

>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score =  105 bits (253), Expect = 1e-24
 Identities = 46/54 (85%), Positives = 49/54 (90%), Gaps = 1/54 (1%)

Query: 32  FTEGRECVNCGAIHTPLWRRDGTGHYLCNACGLYNKMNGMNRPLKQP-RRLVRQ 84
           F EGRECVNCGAI TPLWRRDGTGHYLCNACGLY+KMNGMNRPL +P +RLV Q
Sbjct: 114 FGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLVSQ 167



 Score =  104 bits (250), Expect = 3e-24
 Identities = 64/149 (42%), Positives = 78/149 (52%), Gaps = 11/149 (7%)

Query: 161 KRPGTMCTNCQTTATSLWRRNVQGETVCNACGLYFKLHNVNRPLTMKKDSIQTRKRKPK- 219
           +R G  CTNC T  T+LWRRN  GE VCNACGLYFKLH VNRPL M+KD IQTRKRKPK 
Sbjct: 171 RRLGLCCTNCGTRTTTLWRRNNDGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKK 230

Query: 220 --NSNIKADRSAKAVQRAVSAGIKMESILESARRSPPRLGYYVQSAEGMKLEEPQHHVMY 277
              S   AD  A    +    GI  + +L++ R    +      S +   L  P    ++
Sbjct: 231 TGGSGGSADVMALVGGKKDDGGIG-DGLLQTDRNGNSK--NLTGSPKSQNLSSPTIRSLH 287

Query: 278 IGVPE-----LGPHKAAPHHDHSAVSLAS 301
           I         LG    + HH  SA +L S
Sbjct: 288 ISPHHGQSYGLGSSLGSAHHGGSAGTLGS 316



 Score = 59.7 bits (138), Expect = 1e-10
 Identities = 24/48 (50%), Positives = 32/48 (66%)

Query: 38  CVNCGAIHTPLWRRDGTGHYLCNACGLYNKMNGMNRPLKQPRRLVRQR 85
           C NCG   T LWRR+  G  +CNACGLY K++G+NRPL   +  ++ R
Sbjct: 177 CTNCGTRTTTLWRRNNDGEPVCNACGLYFKLHGVNRPLAMRKDGIQTR 224



 Score = 56.8 bits (131), Expect = 7e-10
 Identities = 22/41 (53%), Positives = 28/41 (68%)

Query: 164 GTMCTNCQTTATSLWRRNVQGETVCNACGLYFKLHNVNRPL 204
           G  C NC   +T LWRR+  G  +CNACGLY K++ +NRPL
Sbjct: 117 GRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPL 157


>AJ404478-1|CAC16182.1|   77|Anopheles gambiae putative GATA
          factor protein.
          Length = 77

 Score = 56.4 bits (130), Expect = 9e-10
 Identities = 28/60 (46%), Positives = 32/60 (53%), Gaps = 4/60 (6%)

Query: 41 CGAIHTPLWRRDGTGHYLCNACGLYNKMN-GMNRPLKQPRRLVRQRHAALAEPPHDVRTS 99
          CG+  TPLWRRD  GH LCNAC LY + N G NRP   P R  + +      P    R S
Sbjct: 1  CGSSDTPLWRRDIVGHTLCNACALYTRQNPGTNRP---PNRSQKAKQTVKTPPAQGNRRS 57



 Score = 48.8 bits (111), Expect = 2e-07
 Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 1/54 (1%)

Query: 170 CQTTATSLWRRNVQGETVCNACGLYFKLH-NVNRPLTMKKDSIQTRKRKPKNSN 222
           C ++ T LWRR++ G T+CNAC LY + +   NRP    + + QT K  P   N
Sbjct: 1   CGSSDTPLWRRDIVGHTLCNACALYTRQNPGTNRPPNRSQKAKQTVKTPPAQGN 54



 Score = 42.3 bits (95), Expect = 2e-05
 Identities = 17/31 (54%), Positives = 19/31 (61%)

Query: 153 KQKKGMGAKRPGTMCTNCQTTATSLWRRNVQ 183
           K     G +R G  C NCQTT T+LWRRN Q
Sbjct: 47  KTPPAQGNRRSGVTCANCQTTTTTLWRRNNQ 77



 Score = 24.6 bits (51), Expect = 3.5
 Identities = 9/18 (50%), Positives = 10/18 (55%)

Query: 35 GRECVNCGAIHTPLWRRD 52
          G  C NC    T LWRR+
Sbjct: 58 GVTCANCQTTTTTLWRRN 75


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 28.7 bits (61), Expect = 0.21
 Identities = 20/73 (27%), Positives = 29/73 (39%)

Query: 226 DRSAKAVQRAVSAGIKMESILESARRSPPRLGYYVQSAEGMKLEEPQHHVMYIGVPELGP 285
           D S     +A  A     ++L +A +S  +    VQ +  M LE P+HH      P    
Sbjct: 790 DESTMTTLQATDAHSAPHALLFAANKSKIKQESLVQQSSRMFLEPPKHHASRGAKPHRSR 849

Query: 286 HKAAPHHDHSAVS 298
            +A     H A S
Sbjct: 850 CEATEARSHLADS 862


>AY390608-1|AAR27305.1|  242|Anopheles gambiae SP22D protein.
          Length = 242

 Score = 28.3 bits (60), Expect = 0.28
 Identities = 10/37 (27%), Positives = 19/37 (51%)

Query: 242 MESILESARRSPPRLGYYVQSAEGMKLEEPQHHVMYI 278
           + S+ E A R+PP+L  Y    +  + ++ Q    Y+
Sbjct: 169 LNSVNEPANRAPPKLASYTDQRQPQQFQQQQRQPQYL 205


>AY390607-1|AAR27304.1|  242|Anopheles gambiae SP22D protein.
          Length = 242

 Score = 28.3 bits (60), Expect = 0.28
 Identities = 10/37 (27%), Positives = 19/37 (51%)

Query: 242 MESILESARRSPPRLGYYVQSAEGMKLEEPQHHVMYI 278
           + S+ E A R+PP+L  Y    +  + ++ Q    Y+
Sbjct: 169 LNSVNEPANRAPPKLASYTDQRQPQQFQQQQRQPQYL 205


>AY390606-1|AAR27303.1|  241|Anopheles gambiae SP22D protein.
          Length = 241

 Score = 28.3 bits (60), Expect = 0.28
 Identities = 10/37 (27%), Positives = 19/37 (51%)

Query: 242 MESILESARRSPPRLGYYVQSAEGMKLEEPQHHVMYI 278
           + S+ E A R+PP+L  Y    +  + ++ Q    Y+
Sbjct: 168 LNSVNEPANRAPPKLASYTDQRQPQQFQQQQRQPQYL 204


>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
           protease protein.
          Length = 1322

 Score = 28.3 bits (60), Expect = 0.28
 Identities = 10/37 (27%), Positives = 19/37 (51%)

Query: 242 MESILESARRSPPRLGYYVQSAEGMKLEEPQHHVMYI 278
           + S+ E A R+PP+L  Y    +  + ++ Q    Y+
Sbjct: 240 LNSVNEPANRAPPKLASYTDQRQPQEFQQQQRQPQYL 276


>AY390605-1|AAR27302.1|  241|Anopheles gambiae SP22D protein.
          Length = 241

 Score = 27.5 bits (58), Expect = 0.49
 Identities = 11/42 (26%), Positives = 20/42 (47%)

Query: 242 MESILESARRSPPRLGYYVQSAEGMKLEEPQHHVMYIGVPEL 283
           + S+ E A R+PP+L  Y       + ++ Q    Y+   +L
Sbjct: 168 LNSVNEPANRAPPKLASYTDQRPPQQFQQQQRQPQYLQPQQL 209


>AY390604-1|AAR27301.1|  241|Anopheles gambiae SP22D protein.
          Length = 241

 Score = 27.1 bits (57), Expect = 0.65
 Identities = 10/37 (27%), Positives = 18/37 (48%)

Query: 242 MESILESARRSPPRLGYYVQSAEGMKLEEPQHHVMYI 278
           + S+ E A R+PP+L  Y       + ++ Q    Y+
Sbjct: 168 LNSVNEPANRAPPKLASYTDQRPPQQFQQQQRQPQYL 204


>AY390603-1|AAR27300.1|  241|Anopheles gambiae SP22D protein.
          Length = 241

 Score = 27.1 bits (57), Expect = 0.65
 Identities = 10/37 (27%), Positives = 18/37 (48%)

Query: 242 MESILESARRSPPRLGYYVQSAEGMKLEEPQHHVMYI 278
           + S+ E A R+PP+L  Y       + ++ Q    Y+
Sbjct: 168 LNSVNEPANRAPPKLASYTDQRPPQQFQQQQRQPQYL 204


>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
           protein.
          Length = 1322

 Score = 27.1 bits (57), Expect = 0.65
 Identities = 10/37 (27%), Positives = 18/37 (48%)

Query: 242 MESILESARRSPPRLGYYVQSAEGMKLEEPQHHVMYI 278
           + S+ E A R+PP+L  Y       + ++ Q    Y+
Sbjct: 239 LNSVNEPANRAPPKLASYTDQRPPQQFQQQQRQPQYL 275


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 11/19 (57%), Positives = 14/19 (73%)

Query: 228 SAKAVQRAVSAGIKMESIL 246
           SA  V+R +SAG+  ESIL
Sbjct: 628 SAGPVERHISAGVPQESIL 646


>Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL10
           protein.
          Length = 204

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 10/32 (31%), Positives = 17/32 (53%)

Query: 50  RRDGTGHYLCNACGLYNKMNGMNRPLKQPRRL 81
           RRD   +++CNA   + ++ G+    K  R L
Sbjct: 143 RRDPNVNWICNAVHKHRELRGLTSAGKSSRGL 174


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.318    0.132    0.409 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 262,888
Number of Sequences: 2123
Number of extensions: 9866
Number of successful extensions: 67
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 48
Number of HSP's gapped (non-prelim): 19
length of query: 301
length of database: 516,269
effective HSP length: 64
effective length of query: 237
effective length of database: 380,397
effective search space: 90154089
effective search space used: 90154089
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 48 (23.4 bits)