GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002155-TA|BGIBMGA002155-PA|undefined
         (114 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   2.0  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    22   6.2  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    22   6.2  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 13  ASCPGGGEHLIDAPRAQRAPSPPLGHSCAVTSA-TTLRHNWPH 54
           +S P GG HL  +P      + P G   A+TS+ +   H  PH
Sbjct: 705 SSSPTGGHHLA-SPSPHHHLTSPHGAPLALTSSKSASTHPSPH 746


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 7   RAAQTGASCPGGGEHLIDAPRAQRA 31
           R     ASC GG   ++++  A RA
Sbjct: 89  RYRSNSASCTGGAAPILESDGASRA 113


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 15/53 (28%), Positives = 21/53 (39%), Gaps = 4/53 (7%)

Query: 4   DKARAAQTGASCP--GGGEHLIDAPRAQRAPS--PPLGHSCAVTSATTLRHNW 52
           +KAR +   A CP  G G   +     QRA S     G    + S   + + W
Sbjct: 234 EKARRSDPAAGCPRSGQGNFQLSPDFRQRASSNASSCGRLSPIQSIVGVENTW 286


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.318    0.132    0.426 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,285
Number of Sequences: 2123
Number of extensions: 4418
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 4
length of query: 114
length of database: 516,269
effective HSP length: 56
effective length of query: 58
effective length of database: 397,381
effective search space: 23048098
effective search space used: 23048098
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 43 (21.4 bits)