Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002155-TA|BGIBMGA002155-PA|undefined
(114 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72506-7|CAA96620.2| 293|Caenorhabditis elegans Hypothetical pr... 29 0.60
Z81061-7|CAB02939.2| 819|Caenorhabditis elegans Hypothetical pr... 27 3.2
Z78413-11|CAB01667.2| 819|Caenorhabditis elegans Hypothetical p... 27 3.2
AL031630-13|CAA20992.1| 814|Caenorhabditis elegans Hypothetical... 27 3.2
Z81457-1|CAB03812.1| 423|Caenorhabditis elegans Hypothetical pr... 27 4.2
Z73105-4|CAA97443.2| 1406|Caenorhabditis elegans Hypothetical pr... 26 7.4
Z69384-10|CAA93420.2| 1406|Caenorhabditis elegans Hypothetical p... 26 7.4
U64598-7|AAK39218.3| 523|Caenorhabditis elegans Twik family of ... 26 7.4
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 26 7.4
AY255664-1|AAQ96601.1| 523|Caenorhabditis elegans two-P domain ... 26 7.4
>Z72506-7|CAA96620.2| 293|Caenorhabditis elegans Hypothetical
protein F07A5.6 protein.
Length = 293
Score = 29.5 bits (63), Expect = 0.60
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Query: 15 CPGGGEHLIDAPRAQRAPSPPLGHSCAVTSATTLRHNWP 53
CP HL P ++ P PP + +++ T+L HN P
Sbjct: 53 CPSAAPHLERRPSGRQLPRPP---TAELSNLTSLAHNGP 88
>Z81061-7|CAB02939.2| 819|Caenorhabditis elegans Hypothetical
protein T01C3.10 protein.
Length = 819
Score = 27.1 bits (57), Expect = 3.2
Identities = 12/46 (26%), Positives = 20/46 (43%)
Query: 33 SPPLGHSCAVTSATTLRHNWPHKYIVRRPITGRRTKCATPTDQLDL 78
+PP+ H A R+NWP +V + G ++L+L
Sbjct: 107 APPIEHQARAMLALLRRYNWPKFGVVTSEMAGNDRFVTAIREELEL 152
>Z78413-11|CAB01667.2| 819|Caenorhabditis elegans Hypothetical
protein T01C3.10 protein.
Length = 819
Score = 27.1 bits (57), Expect = 3.2
Identities = 12/46 (26%), Positives = 20/46 (43%)
Query: 33 SPPLGHSCAVTSATTLRHNWPHKYIVRRPITGRRTKCATPTDQLDL 78
+PP+ H A R+NWP +V + G ++L+L
Sbjct: 107 APPIEHQARAMLALLRRYNWPKFGVVTSEMAGNDRFVTAIREELEL 152
>AL031630-13|CAA20992.1| 814|Caenorhabditis elegans Hypothetical
protein Y38H6C.14 protein.
Length = 814
Score = 27.1 bits (57), Expect = 3.2
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 31 APSPPLGHSCAVTSATTLRHNWPHKYIVRRP 61
AP PP S + T TL HN H+ + P
Sbjct: 119 APEPPREQSWSQTEYATLAHNQSHEALYEDP 149
>Z81457-1|CAB03812.1| 423|Caenorhabditis elegans Hypothetical
protein C01G12.1 protein.
Length = 423
Score = 26.6 bits (56), Expect = 4.2
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 7/98 (7%)
Query: 1 MVSDKARAAQ-TGASCPGGGEHLIDAPRAQRAPSPPLGHSCAVTSATTLRHNWPHKYIVR 59
+ +++AR A A G L A +++ A PPL S +A+T H P+K R
Sbjct: 259 IAANQARFAHHLAAQLTGMSSMLNGARKSEEAAIPPLRPSTPPPTASTTSHFHPYKEAAR 318
Query: 60 RPITGRRTKCATPTDQLDLPDAAAGDARLLEWRNDNQL 97
R + A + L LEW ND L
Sbjct: 319 ---NRHRQQTADNVMRYHLQQVG---RVALEWLNDEDL 350
>Z73105-4|CAA97443.2| 1406|Caenorhabditis elegans Hypothetical
protein T11G6.5 protein.
Length = 1406
Score = 25.8 bits (54), Expect = 7.4
Identities = 13/47 (27%), Positives = 19/47 (40%)
Query: 18 GGEHLIDAPRAQRAPSPPLGHSCAVTSATTLRHNWPHKYIVRRPITG 64
G H + Q APS H+C V T H++I+ + G
Sbjct: 170 GKRHEVPLSSGQVAPSKSKKHNCHVMMKTETNSAKFHRFILEHSLAG 216
>Z69384-10|CAA93420.2| 1406|Caenorhabditis elegans Hypothetical
protein T11G6.5 protein.
Length = 1406
Score = 25.8 bits (54), Expect = 7.4
Identities = 13/47 (27%), Positives = 19/47 (40%)
Query: 18 GGEHLIDAPRAQRAPSPPLGHSCAVTSATTLRHNWPHKYIVRRPITG 64
G H + Q APS H+C V T H++I+ + G
Sbjct: 170 GKRHEVPLSSGQVAPSKSKKHNCHVMMKTETNSAKFHRFILEHSLAG 216
>U64598-7|AAK39218.3| 523|Caenorhabditis elegans Twik family of
potassium channelsprotein 28 protein.
Length = 523
Score = 25.8 bits (54), Expect = 7.4
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 48 LRHNWPHKYIVRRPITGRRTKCATPTDQLDLPD 80
L+ N+ HK ++ P+TG K + LPD
Sbjct: 434 LQFNYQHKNVLYEPLTGNLAKVVKEANIKILPD 466
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 25.8 bits (54), Expect = 7.4
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 8 AAQTGASCPGGGEHLIDAPRAQRAPSP 34
A +T AS P E AP A+ AP+P
Sbjct: 697 AEETPASAPAAEETPAPAPAAEEAPAP 723
>AY255664-1|AAQ96601.1| 523|Caenorhabditis elegans two-P domain K
channel protein.
Length = 523
Score = 25.8 bits (54), Expect = 7.4
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 48 LRHNWPHKYIVRRPITGRRTKCATPTDQLDLPD 80
L+ N+ HK ++ P+TG K + LPD
Sbjct: 434 LQFNYQHKNVLYEPLTGNLAKVVKEANIKILPD 466
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.318 0.132 0.426
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,679,624
Number of Sequences: 27539
Number of extensions: 97761
Number of successful extensions: 201
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 191
Number of HSP's gapped (non-prelim): 11
length of query: 114
length of database: 12,573,161
effective HSP length: 72
effective length of query: 42
effective length of database: 10,590,353
effective search space: 444794826
effective search space used: 444794826
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 53 (25.4 bits)
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