GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002155-TA|BGIBMGA002155-PA|undefined
         (114 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   0.89 
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   0.89 
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    20   6.3  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    20   6.3  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              20   8.3  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.0 bits (47), Expect = 0.89
 Identities = 8/27 (29%), Positives = 13/27 (48%)

Query: 29  QRAPSPPLGHSCAVTSATTLRHNWPHK 55
           Q  P PP     A+ ++ ++   W HK
Sbjct: 905 QEPPQPPNSLETAMVASRSINVKWQHK 931


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.0 bits (47), Expect = 0.89
 Identities = 8/27 (29%), Positives = 13/27 (48%)

Query: 29  QRAPSPPLGHSCAVTSATTLRHNWPHK 55
           Q  P PP     A+ ++ ++   W HK
Sbjct: 901 QEPPQPPNSLETAMVASRSINVKWQHK 927


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 9/24 (37%), Positives = 12/24 (50%)

Query: 60  RPITGRRTKCATPTDQLDLPDAAA 83
           + I  RRT+C T +   D P   A
Sbjct: 252 KSIRARRTECVTNSVTCDRPSDEA 275


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
          protein MRJP5 protein.
          Length = 598

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 8/20 (40%), Positives = 12/20 (60%)

Query: 36 LGHSCAVTSATTLRHNWPHK 55
          LG +C   ++ T+R N P K
Sbjct: 11 LGIACQGITSVTVRENSPRK 30


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 6/19 (31%), Positives = 11/19 (57%)

Query: 34   PPLGHSCAVTSATTLRHNW 52
            PP   +C   ++ T+R +W
Sbjct: 1084 PPHDTTCTTLTSQTIRISW 1102


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.318    0.132    0.426 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,991
Number of Sequences: 429
Number of extensions: 1071
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 114
length of database: 140,377
effective HSP length: 50
effective length of query: 64
effective length of database: 118,927
effective search space:  7611328
effective search space used:  7611328
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
S2: 39 (19.8 bits)